RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
PCTP-201ENST00000268896 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
PCTP-201ENST00000268896 KDM4FA0A1W2PPD8 638 aa22.04■■□□□ 1.12
PCTP-201ENST00000268896 KNDC1Q76NI1 1749 aa22.04■■□□□ 1.12
PCTP-201ENST00000268896 TBX22Q9Y458 520 aa22.04■■□□□ 1.12
PCTP-201ENST00000268896 ROBO2Q9HCK4 1378 aa22.03■■□□□ 1.12
PCTP-201ENST00000268896 KNSTRNQ9Y448 316 aa22.03■■□□□ 1.12
PCTP-201ENST00000268896 CDK19Q9BWU1 502 aa22.02■■□□□ 1.12
PCTP-201ENST00000268896 AMOTL2Q9Y2J4 779 aa22.02■■□□□ 1.12
PCTP-201ENST00000268896 KTN1Q86UP2 1357 aaKnown RBP22.02■■□□□ 1.12
PCTP-201ENST00000268896 CPS1P31327 1500 aa22.01■■□□□ 1.11
PCTP-201ENST00000268896 TECPR2O15040 1411 aa22.01■■□□□ 1.11
PCTP-201ENST00000268896 MRS2Q9HD23 443 aa22■■□□□ 1.11
PCTP-201ENST00000268896 NCKAP5LQ9HCH0 1330 aa22■■□□□ 1.11
PCTP-201ENST00000268896 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
PCTP-201ENST00000268896 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
PCTP-201ENST00000268896 FAM135BQ49AJ0 1406 aa21.98■■□□□ 1.11
PCTP-201ENST00000268896 RALBP1Q15311 655 aa21.96■■□□□ 1.11
PCTP-201ENST00000268896 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
PCTP-201ENST00000268896 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
PCTP-201ENST00000268896 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
PCTP-201ENST00000268896 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
PCTP-201ENST00000268896 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
PCTP-201ENST00000268896 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
PCTP-201ENST00000268896 WASLO00401 505 aaPredicted RBP21.94■■□□□ 1.1
PCTP-201ENST00000268896 KCNA6P17658 529 aa21.94■■□□□ 1.1
PCTP-201ENST00000268896 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
PCTP-201ENST00000268896 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
PCTP-201ENST00000268896 HSPA2P54652 639 aa21.93■■□□□ 1.1
PCTP-201ENST00000268896 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
PCTP-201ENST00000268896 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
PCTP-201ENST00000268896 CABP1Q9NZU7 370 aa21.91■■□□□ 1.1
PCTP-201ENST00000268896 NUTM2FA1L443 756 aa21.9■■□□□ 1.1
PCTP-201ENST00000268896 ANKRD36BQ8N2N9 1353 aa21.89■■□□□ 1.1
PCTP-201ENST00000268896 XRN1Q8IZH2 1706 aaKnown RBP21.89■■□□□ 1.1
PCTP-201ENST00000268896 PTCH1Q13635 1447 aa21.89■■□□□ 1.09
PCTP-201ENST00000268896 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
PCTP-201ENST00000268896 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
PCTP-201ENST00000268896 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
PCTP-201ENST00000268896 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
PCTP-201ENST00000268896 NINLQ9Y2I6 1382 aa21.86■■□□□ 1.09
PCTP-201ENST00000268896 CHD2O14647 1828 aaKnown RBP21.85■■□□□ 1.09
PCTP-201ENST00000268896 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
PCTP-201ENST00000268896 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
PCTP-201ENST00000268896 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
PCTP-201ENST00000268896 CD163L1Q9NR16 1453 aa21.84■■□□□ 1.09
PCTP-201ENST00000268896 PRR36Q9H6K5 1346 aa21.83■■□□□ 1.09
PCTP-201ENST00000268896 HDGFL2Q7Z4V5 671 aaPredicted RBP21.83■■□□□ 1.09
PCTP-201ENST00000268896 BRD4O60885 1362 aaPredicted RBP21.82■■□□□ 1.08
PCTP-201ENST00000268896 ADGRB2O60241 1585 aa21.82■■□□□ 1.08
PCTP-201ENST00000268896 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
PCTP-201ENST00000268896 CGNL1Q0VF96 1302 aa21.81■■□□□ 1.08
PCTP-201ENST00000268896 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
PCTP-201ENST00000268896 TNNT2P45379 298 aaPredicted RBP21.81■■□□□ 1.08
PCTP-201ENST00000268896 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
PCTP-201ENST00000268896 ATP7BP35670 1465 aa21.8■■□□□ 1.08
PCTP-201ENST00000268896 LMTK3Q96Q04 1460 aa21.79■■□□□ 1.08
PCTP-201ENST00000268896 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCTP-201ENST00000268896 MORC1Q86VD1 984 aa21.79■■□□□ 1.08
PCTP-201ENST00000268896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.77■■□□□ 1.08
PCTP-201ENST00000268896 PNISRQ8TF01 805 aaKnown RBP21.77■■□□□ 1.07
PCTP-201ENST00000268896 GGNBP2Q9H3C7 697 aa21.77■■□□□ 1.07
PCTP-201ENST00000268896 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
PCTP-201ENST00000268896 USP32Q8NFA0 1604 aa21.76■■□□□ 1.07
PCTP-201ENST00000268896 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
PCTP-201ENST00000268896 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
PCTP-201ENST00000268896 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
PCTP-201ENST00000268896 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
PCTP-201ENST00000268896 CDC42BPGQ6DT37 1551 aa21.72■■□□□ 1.07
PCTP-201ENST00000268896 FYB1O15117 783 aa21.72■■□□□ 1.07
PCTP-201ENST00000268896 RGPD8O14715 1765 aaPredicted RBP21.71■■□□□ 1.07
PCTP-201ENST00000268896 CPSF1Q10570 1443 aaKnown RBP21.71■■□□□ 1.07
PCTP-201ENST00000268896 PROSER2Q86WR7 435 aaPredicted RBP21.71■■□□□ 1.07
PCTP-201ENST00000268896 TOPAZ1Q8N9V7 1692 aa21.71■■□□□ 1.07
PCTP-201ENST00000268896 ACEP12821 1306 aa21.7■■□□□ 1.06
PCTP-201ENST00000268896 ITSN1Q15811 1721 aa21.7■■□□□ 1.06
PCTP-201ENST00000268896 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
PCTP-201ENST00000268896 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
PCTP-201ENST00000268896 NSD2O96028 1365 aa21.7■■□□□ 1.06
PCTP-201ENST00000268896 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
PCTP-201ENST00000268896 KIF20BQ96Q89 1820 aa21.68■■□□□ 1.06
PCTP-201ENST00000268896 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
PCTP-201ENST00000268896 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
PCTP-201ENST00000268896 NME9Q86XW9 330 aa21.67■■□□□ 1.06
PCTP-201ENST00000268896 EDC4Q6P2E9 1401 aaKnown RBP21.66■■□□□ 1.06
PCTP-201ENST00000268896 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
PCTP-201ENST00000268896 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
PCTP-201ENST00000268896 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
PCTP-201ENST00000268896 MON2Q7Z3U7 1717 aa21.65■■□□□ 1.06
PCTP-201ENST00000268896 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
PCTP-201ENST00000268896 STRCP1A6NGW2 1772 aa21.65■■□□□ 1.06
PCTP-201ENST00000268896 ZNF692Q9BU19 519 aaPredicted RBP21.65■■□□□ 1.06
PCTP-201ENST00000268896 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.05
PCTP-201ENST00000268896 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
PCTP-201ENST00000268896 MTHFSP49914 203 aa21.62■■□□□ 1.05
PCTP-201ENST00000268896 WDR43Q15061 677 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCTP-201ENST00000268896 ANKARQ7Z5J8 1434 aa21.62■■□□□ 1.05
PCTP-201ENST00000268896 FBLN1P23142 703 aa21.62■■□□□ 1.05
PCTP-201ENST00000268896 ADAMTS8Q9UP79 889 aa21.6■■□□□ 1.05
PCTP-201ENST00000268896 TTC21BQ7Z4L5 1316 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms