RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
CHFR-201ENST00000266880 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
CHFR-201ENST00000266880 SDF4Q9BRK5 362 aa13.39□□□□□ -0.27
CHFR-201ENST00000266880 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
CHFR-201ENST00000266880 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHFR-201ENST00000266880 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
CHFR-201ENST00000266880 EZRP15311 586 aaKnown RBP13.38□□□□□ -0.27
CHFR-201ENST00000266880 PHLDB1Q86UU1 1377 aa13.38□□□□□ -0.27
CHFR-201ENST00000266880 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
CHFR-201ENST00000266880 EIF3JO75822 258 aaKnown RBP13.38□□□□□ -0.27
CHFR-201ENST00000266880 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
CHFR-201ENST00000266880 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
CHFR-201ENST00000266880 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
CHFR-201ENST00000266880 FAM177A1Q8N128 213 aaPredicted RBP13.37□□□□□ -0.27
CHFR-201ENST00000266880 IFIT2P09913 472 aaKnown RBP13.37□□□□□ -0.27
CHFR-201ENST00000266880 MLECQ14165 292 aa13.37□□□□□ -0.27
CHFR-201ENST00000266880 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
CHFR-201ENST00000266880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHFR-201ENST00000266880 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
CHFR-201ENST00000266880 MAGEC2Q9UBF1 373 aaPredicted RBP13.36□□□□□ -0.27
CHFR-201ENST00000266880 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 KIF15Q9NS87 1388 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 ELL2O00472 640 aaPredicted RBP13.36□□□□□ -0.27
CHFR-201ENST00000266880 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CHFR-201ENST00000266880 PKD2Q13563 968 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
CHFR-201ENST00000266880 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
CHFR-201ENST00000266880 TRDNQ13061 729 aa13.35□□□□□ -0.27
CHFR-201ENST00000266880 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
CHFR-201ENST00000266880 NF2P35240 595 aa13.35□□□□□ -0.27
CHFR-201ENST00000266880 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
CHFR-201ENST00000266880 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
CHFR-201ENST00000266880 CLGNO14967 610 aa13.34□□□□□ -0.27
CHFR-201ENST00000266880 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
CHFR-201ENST00000266880 GOLGA6L10A0A0M3HER8 536 aa13.34□□□□□ -0.27
CHFR-201ENST00000266880 ERLIN1O75477 346 aa13.34□□□□□ -0.27
CHFR-201ENST00000266880 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
CHFR-201ENST00000266880 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
CHFR-201ENST00000266880 PAF1Q8N7H5 531 aa13.33□□□□□ -0.28
CHFR-201ENST00000266880 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
CHFR-201ENST00000266880 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.28
CHFR-201ENST00000266880 GBP2P32456 591 aaPredicted RBP13.33□□□□□ -0.28
CHFR-201ENST00000266880 FIBPO43427 364 aa13.33□□□□□ -0.28
CHFR-201ENST00000266880 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
CHFR-201ENST00000266880 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
CHFR-201ENST00000266880 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
CHFR-201ENST00000266880 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
CHFR-201ENST00000266880 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 CBX1P83916 185 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
CHFR-201ENST00000266880 FYB1O15117 783 aa13.31□□□□□ -0.28
CHFR-201ENST00000266880 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
CHFR-201ENST00000266880 ERICH2A1L162 156 aa13.31□□□□□ -0.28
CHFR-201ENST00000266880 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
CHFR-201ENST00000266880 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
CHFR-201ENST00000266880 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHFR-201ENST00000266880 MBD3O95983 291 aa13.31□□□□□ -0.28
CHFR-201ENST00000266880 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
CHFR-201ENST00000266880 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
CHFR-201ENST00000266880 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
CHFR-201ENST00000266880 LNPKQ9C0E8 428 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 VPS37DQ86XT2 251 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 RABEP1Q15276 862 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 BRMS1Q9HCU9 246 aa13.3□□□□□ -0.28
CHFR-201ENST00000266880 AMPHP49418 695 aa13.29□□□□□ -0.28
CHFR-201ENST00000266880 TMEM132AQ24JP5 1023 aa13.29□□□□□ -0.28
CHFR-201ENST00000266880 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
CHFR-201ENST00000266880 SERPINC1P01008 464 aa13.29□□□□□ -0.28
CHFR-201ENST00000266880 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
CHFR-201ENST00000266880 GRPEL1Q9HAV7 217 aa13.28□□□□□ -0.28
CHFR-201ENST00000266880 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
CHFR-201ENST00000266880 POLR3GO15318 223 aaPredicted RBP13.28□□□□□ -0.28
CHFR-201ENST00000266880 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
CHFR-201ENST00000266880 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
CHFR-201ENST00000266880 SYCP1Q15431 976 aa13.28□□□□□ -0.28
CHFR-201ENST00000266880 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.28
CHFR-201ENST00000266880 TNMDQ9H2S6 317 aa13.27□□□□□ -0.28
CHFR-201ENST00000266880 CDC45O75419 566 aa13.27□□□□□ -0.28
CHFR-201ENST00000266880 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.28
CHFR-201ENST00000266880 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.28
CHFR-201ENST00000266880 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.28
CHFR-201ENST00000266880 IQCEQ6IPM2 695 aa13.27□□□□□ -0.29
CHFR-201ENST00000266880 DDX19BQ9UMR2 479 aa13.27□□□□□ -0.29
CHFR-201ENST00000266880 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 DDX11Q96FC9 970 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 PAIP2Q9BPZ3 127 aaKnown RBP13.26□□□□□ -0.29
CHFR-201ENST00000266880 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 SEPT11Q9NVA2 429 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms