RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 PLEKHH1Q9ULM0 1364 aa33.37■■■□□ 2.93
R3HCC1-201ENST00000265806 WAPLQ7Z5K2 1190 aa33.37■■■□□ 2.93
R3HCC1-201ENST00000265806 SLC26A8Q96RN1 970 aa33.37■■■□□ 2.93
R3HCC1-201ENST00000265806 KNSTRNQ9Y448 316 aa33.37■■■□□ 2.93
R3HCC1-201ENST00000265806 CENPBP07199 599 aaPredicted RBP33.36■■■□□ 2.93
R3HCC1-201ENST00000265806 ANKLE2Q86XL3 938 aa33.36■■■□□ 2.93
R3HCC1-201ENST00000265806 NPC1L1Q9UHC9 1359 aa33.33■■■□□ 2.93
R3HCC1-201ENST00000265806 NINLQ9Y2I6 1382 aa33.33■■■□□ 2.93
R3HCC1-201ENST00000265806 ATAD2Q6PL18 1390 aa33.32■■■□□ 2.93
R3HCC1-201ENST00000265806 CNGB1Q14028 1251 aaPredicted RBP33.32■■■□□ 2.92
R3HCC1-201ENST00000265806 CABP2Q9NPB3 220 aa33.32■■■□□ 2.92
R3HCC1-201ENST00000265806 PTPRUQ92729 1446 aa33.32■■■□□ 2.92
R3HCC1-201ENST00000265806 CCDC184Q52MB2 194 aa33.32■■■□□ 2.92
R3HCC1-201ENST00000265806 MYBBP1AQ9BQG0 1328 aaKnown RBP33.31■■■□□ 2.92
R3HCC1-201ENST00000265806 AMER1Q5JTC6 1135 aaPredicted RBP33.31■■■□□ 2.92
R3HCC1-201ENST00000265806 SRPK2P78362 688 aaKnown RBP33.3■■■□□ 2.92
R3HCC1-201ENST00000265806 SLC12A5Q9H2X9 1139 aa33.3■■■□□ 2.92
R3HCC1-201ENST00000265806 ROBO2Q9HCK4 1378 aa33.3■■■□□ 2.92
R3HCC1-201ENST00000265806 MRS2Q9HD23 443 aa33.29■■■□□ 2.92
R3HCC1-201ENST00000265806 PIK3R4Q99570 1358 aa33.29■■■□□ 2.92
R3HCC1-201ENST00000265806 TMC1Q8TDI8 760 aa33.29■■■□□ 2.92
R3HCC1-201ENST00000265806 CDK19Q9BWU1 502 aa33.27■■■□□ 2.92
R3HCC1-201ENST00000265806 CARD14Q9BXL6 1004 aa33.27■■■□□ 2.92
R3HCC1-201ENST00000265806 CC2D1BQ5T0F9 858 aaKnown RBP33.26■■■□□ 2.92
R3HCC1-201ENST00000265806 PTCH1Q13635 1447 aa33.25■■■□□ 2.91
R3HCC1-201ENST00000265806 ANKRD36BQ8N2N9 1353 aa33.24■■■□□ 2.91
R3HCC1-201ENST00000265806 AMOTL2Q9Y2J4 779 aa33.24■■■□□ 2.91
R3HCC1-201ENST00000265806 BRD4O60885 1362 aaPredicted RBP33.22■■■□□ 2.91
R3HCC1-201ENST00000265806 XRN1Q8IZH2 1706 aaKnown RBP33.22■■■□□ 2.91
R3HCC1-201ENST00000265806 WASLO00401 505 aaPredicted RBP33.21■■■□□ 2.91
R3HCC1-201ENST00000265806 ADGRB2O60241 1585 aa33.2■■■□□ 2.9
R3HCC1-201ENST00000265806 NLRP13Q86W25 1043 aa33.19■■■□□ 2.9
R3HCC1-201ENST00000265806 NSD3Q9BZ95 1437 aa33.18■■■□□ 2.9
R3HCC1-201ENST00000265806 USP32Q8NFA0 1604 aa33.17■■■□□ 2.9
R3HCC1-201ENST00000265806 NPHP4O75161 1426 aaPredicted RBP33.16■■■□□ 2.9
R3HCC1-201ENST00000265806 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.16■■■□□ 2.9
R3HCC1-201ENST00000265806 KDM4FA0A1W2PPD8 638 aa33.15■■■□□ 2.9
R3HCC1-201ENST00000265806 A0A1W2PP64 1363 aa33.12■■■□□ 2.89
R3HCC1-201ENST00000265806 TERF2IPQ9NYB0 399 aa33.11■■■□□ 2.89
R3HCC1-201ENST00000265806 CD163L1Q9NR16 1453 aa33.11■■■□□ 2.89
R3HCC1-201ENST00000265806 CHD2O14647 1828 aaKnown RBP33.11■■■□□ 2.89
R3HCC1-201ENST00000265806 ATP7BP35670 1465 aa33.08■■■□□ 2.89
R3HCC1-201ENST00000265806 CGNL1Q0VF96 1302 aa33.08■■■□□ 2.89
R3HCC1-201ENST00000265806 KCNA6P17658 529 aa33.08■■■□□ 2.89
R3HCC1-201ENST00000265806 FAM9BQ8IZU0 186 aa33.08■■■□□ 2.89
R3HCC1-201ENST00000265806 PNISRQ8TF01 805 aaKnown RBP33.07■■■□□ 2.88
R3HCC1-201ENST00000265806 CABP1Q9NZU7 370 aa33.07■■■□□ 2.88
R3HCC1-201ENST00000265806 NCKAP5LQ9HCH0 1330 aa33.06■■■□□ 2.88
R3HCC1-201ENST00000265806 NSD2O96028 1365 aa33.05■■■□□ 2.88
R3HCC1-201ENST00000265806 PPP2R1AP30153 589 aa33.05■■■□□ 2.88
R3HCC1-201ENST00000265806 NUDT16Q96DE0 195 aaKnown RBP33.05■■■□□ 2.88
R3HCC1-201ENST00000265806 HDGFL2Q7Z4V5 671 aaPredicted RBP33.04■■■□□ 2.88
R3HCC1-201ENST00000265806 CCDC61Q9Y6R9 512 aa33.03■■■□□ 2.88
R3HCC1-201ENST00000265806 PPIP5K1Q6PFW1 1433 aa33.02■■■□□ 2.88
R3HCC1-201ENST00000265806 PRR36Q9H6K5 1346 aa32.98■■■□□ 2.87
R3HCC1-201ENST00000265806 CPSF1Q10570 1443 aaKnown RBP32.98■■■□□ 2.87
R3HCC1-201ENST00000265806 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
R3HCC1-201ENST00000265806 HNRNPUQ00839 825 aaKnown RBP eCLIP32.96■■■□□ 2.87
R3HCC1-201ENST00000265806 TOPAZ1Q8N9V7 1692 aa32.95■■■□□ 2.87
R3HCC1-201ENST00000265806 MORC1Q86VD1 984 aa32.94■■■□□ 2.86
R3HCC1-201ENST00000265806 NWD1Q149M9 1564 aa32.94■■■□□ 2.86
R3HCC1-201ENST00000265806 LMTK3Q96Q04 1460 aa32.91■■■□□ 2.86
R3HCC1-201ENST00000265806 EDC4Q6P2E9 1401 aaKnown RBP32.89■■■□□ 2.86
R3HCC1-201ENST00000265806 PLEKHG3A1L390 1219 aa32.88■■■□□ 2.85
R3HCC1-201ENST00000265806 AKAP12Q02952 1782 aa32.88■■■□□ 2.85
R3HCC1-201ENST00000265806 FYB1O15117 783 aa32.88■■■□□ 2.85
R3HCC1-201ENST00000265806 ANKRD26Q9UPS8 1709 aa32.87■■■□□ 2.85
R3HCC1-201ENST00000265806 INSRP06213 1382 aa32.87■■■□□ 2.85
R3HCC1-201ENST00000265806 ZNF692Q9BU19 519 aaPredicted RBP32.87■■■□□ 2.85
R3HCC1-201ENST00000265806 MON2Q7Z3U7 1717 aa32.87■■■□□ 2.85
R3HCC1-201ENST00000265806 ANKARQ7Z5J8 1434 aa32.86■■■□□ 2.85
R3HCC1-201ENST00000265806 ITSN1Q15811 1721 aa32.86■■■□□ 2.85
R3HCC1-201ENST00000265806 HSPA2P54652 639 aa32.86■■■□□ 2.85
R3HCC1-201ENST00000265806 NALCNQ8IZF0 1738 aa32.85■■■□□ 2.85
R3HCC1-201ENST00000265806 KIF20BQ96Q89 1820 aa32.85■■■□□ 2.85
R3HCC1-201ENST00000265806 FMN2Q9NZ56 1722 aa32.84■■■□□ 2.85
R3HCC1-201ENST00000265806 ADGRL3Q9HAR2 1447 aa32.83■■■□□ 2.85
R3HCC1-201ENST00000265806 GGNBP2Q9H3C7 697 aa32.82■■■□□ 2.84
R3HCC1-201ENST00000265806 NKTRP30414 1462 aaKnown RBP32.82■■■□□ 2.84
R3HCC1-201ENST00000265806 POLR3AO14802 1390 aaPredicted RBP32.81■■■□□ 2.84
R3HCC1-201ENST00000265806 NUTM2FA1L443 756 aa32.81■■■□□ 2.84
R3HCC1-201ENST00000265806 ZBED9Q6R2W3 1325 aa32.8■■■□□ 2.84
R3HCC1-201ENST00000265806 ACEP12821 1306 aa32.78■■■□□ 2.84
R3HCC1-201ENST00000265806 TNNT2P45379 298 aaPredicted RBP32.76■■■□□ 2.84
R3HCC1-201ENST00000265806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.76■■■□□ 2.84
R3HCC1-201ENST00000265806 RGPD8O14715 1765 aaPredicted RBP32.75■■■□□ 2.83
R3HCC1-201ENST00000265806 NRKQ7Z2Y5 1582 aa32.74■■■□□ 2.83
R3HCC1-201ENST00000265806 STRCQ7RTU9 1775 aa32.73■■■□□ 2.83
R3HCC1-201ENST00000265806 USP6P35125 1406 aa32.73■■■□□ 2.83
R3HCC1-201ENST00000265806 BLMP54132 1417 aaPredicted RBP32.73■■■□□ 2.83
R3HCC1-201ENST00000265806 WDR43Q15061 677 aaKnown RBP eCLIP32.72■■■□□ 2.83
R3HCC1-201ENST00000265806 MTHFSP49914 203 aa32.71■■■□□ 2.83
R3HCC1-201ENST00000265806 RBM33Q96EV2 1170 aaKnown RBP32.71■■■□□ 2.83
R3HCC1-201ENST00000265806 PROSER2Q86WR7 435 aaPredicted RBP32.7■■■□□ 2.83
R3HCC1-201ENST00000265806 ADAMTS8Q9UP79 889 aa32.7■■■□□ 2.82
R3HCC1-201ENST00000265806 SCAF1Q9H7N4 1312 aaKnown RBP32.69■■■□□ 2.82
R3HCC1-201ENST00000265806 SSH2Q76I76 1423 aa32.69■■■□□ 2.82
R3HCC1-201ENST00000265806 TTC21BQ7Z4L5 1316 aa32.68■■■□□ 2.82
R3HCC1-201ENST00000265806 NME9Q86XW9 330 aa32.68■■■□□ 2.82
R3HCC1-201ENST00000265806 PMFBP1Q8TBY8 1022 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms