RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
CHMP2B-201ENST00000263780 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
CHMP2B-201ENST00000263780 TRPM2O94759 1503 aa15.64■□□□□ 0.09
CHMP2B-201ENST00000263780 SKOR2Q2VWA4 1001 aaPredicted RBP15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 ARXQ96QS3 562 aa15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 KIAA1210Q9ULL0 1709 aa15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 TRIM44Q96DX7 344 aaPredicted RBP15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 PANK2Q9BZ23 570 aa15.63■□□□□ 0.09
CHMP2B-201ENST00000263780 ESPNB1AK53 854 aa15.62■□□□□ 0.09
CHMP2B-201ENST00000263780 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
CHMP2B-201ENST00000263780 RLBP1P12271 317 aa15.62■□□□□ 0.09
CHMP2B-201ENST00000263780 PTPRTO14522 1441 aa15.62■□□□□ 0.09
CHMP2B-201ENST00000263780 ZKSCAN2Q63HK3 967 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 SPRYD3Q8NCJ5 442 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 PKNOX2Q96KN3 472 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 GBP4Q96PP9 640 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 CARD14Q9BXL6 1004 aa15.61■□□□□ 0.09
CHMP2B-201ENST00000263780 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 HDAC1Q13547 482 aaPredicted RBP15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 SNX21Q969T3 373 aa15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
CHMP2B-201ENST00000263780 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
CHMP2B-201ENST00000263780 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
CHMP2B-201ENST00000263780 TPM2P07951 284 aa15.59■□□□□ 0.09
CHMP2B-201ENST00000263780 CEP152O94986 1710 aa15.58■□□□□ 0.09
CHMP2B-201ENST00000263780 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
CHMP2B-201ENST00000263780 SBNO2Q9Y2G9 1366 aa15.58■□□□□ 0.08
CHMP2B-201ENST00000263780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.08
CHMP2B-201ENST00000263780 NEUROD2Q15784 382 aa15.58■□□□□ 0.08
CHMP2B-201ENST00000263780 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
CHMP2B-201ENST00000263780 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
CHMP2B-201ENST00000263780 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 RBM25P49756 843 aaKnown RBP15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 SMC5Q8IY18 1101 aa15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CHMP2B-201ENST00000263780 DDIT3P35638 169 aa15.55■□□□□ 0.08
CHMP2B-201ENST00000263780 VSIG10Q8N0Z9 540 aa15.55■□□□□ 0.08
CHMP2B-201ENST00000263780 RRP7AQ9Y3A4 280 aaKnown RBP15.55■□□□□ 0.08
CHMP2B-201ENST00000263780 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
CHMP2B-201ENST00000263780 MYOM2P54296 1465 aa15.54■□□□□ 0.08
CHMP2B-201ENST00000263780 ANP32BQ92688 251 aaKnown RBP15.53■□□□□ 0.08
CHMP2B-201ENST00000263780 TNNQ9UQP3 1299 aa15.53■□□□□ 0.08
CHMP2B-201ENST00000263780 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
CHMP2B-201ENST00000263780 CLTCL1P53675 1640 aa15.52■□□□□ 0.08
CHMP2B-201ENST00000263780 PLCH2O75038 1416 aa15.52■□□□□ 0.07
CHMP2B-201ENST00000263780 CCDC173Q0VFZ6 552 aa15.52■□□□□ 0.07
CHMP2B-201ENST00000263780 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
CHMP2B-201ENST00000263780 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 TNPO1Q92973 898 aaKnown RBP15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 ZMYND15Q9H091 742 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 RAB3GAP1Q15042 981 aa15.51■□□□□ 0.07
CHMP2B-201ENST00000263780 SMC4Q9NTJ3 1288 aa15.5■□□□□ 0.07
CHMP2B-201ENST00000263780 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
CHMP2B-201ENST00000263780 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 ZNF518AQ6AHZ1 1483 aa15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 MAP3K4Q9Y6R4 1608 aa15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 IPO8O15397 1037 aaKnown RBP15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 PDCL3Q9H2J4 239 aa15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 KIF16BQ96L93 1317 aa15.49■□□□□ 0.07
CHMP2B-201ENST00000263780 MTHFSP49914 203 aa15.48■□□□□ 0.07
CHMP2B-201ENST00000263780 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
CHMP2B-201ENST00000263780 ITPRIPQ8IWB1 547 aa15.48■□□□□ 0.07
CHMP2B-201ENST00000263780 TET3O43151 1660 aa15.48■□□□□ 0.07
CHMP2B-201ENST00000263780 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
CHMP2B-201ENST00000263780 PPP1R9BQ96SB3 815 aa15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 ERBB4Q15303 1308 aa15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 TERF1P54274 439 aa15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 NUCB1Q02818 461 aa15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 NSD2O96028 1365 aa15.47■□□□□ 0.07
CHMP2B-201ENST00000263780 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
CHMP2B-201ENST00000263780 TRIM27P14373 513 aa15.46■□□□□ 0.07
CHMP2B-201ENST00000263780 IL16Q14005 1332 aa15.46■□□□□ 0.07
CHMP2B-201ENST00000263780 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
CHMP2B-201ENST00000263780 ABCC1P33527 1531 aa15.46■□□□□ 0.07
CHMP2B-201ENST00000263780 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 USP32Q8NFA0 1604 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 CLEC17AQ6ZS10 378 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 GAS2L3Q86XJ1 694 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 ABCA6Q8N139 1617 aa15.45■□□□□ 0.06
CHMP2B-201ENST00000263780 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 DEPDC5O75140 1603 aa15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 ABCC11Q96J66 1382 aa15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 NASPP49321 788 aaPredicted RBP15.44■□□□□ 0.06
CHMP2B-201ENST00000263780 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms