RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
LDB3-201ENST00000263066 PLCH2O75038 1416 aa10.44□□□□□ -0.74
LDB3-201ENST00000263066 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
LDB3-201ENST00000263066 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
LDB3-201ENST00000263066 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
LDB3-201ENST00000263066 ZCCHC11Q5TAX3 1644 aaKnown RBP10.43□□□□□ -0.74
LDB3-201ENST00000263066 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 CCDC141Q6ZP82 1450 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
LDB3-201ENST00000263066 NCOA1Q15788 1441 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 NASPP49321 788 aaPredicted RBP10.43□□□□□ -0.74
LDB3-201ENST00000263066 TAF3Q5VWG9 929 aa10.43□□□□□ -0.74
LDB3-201ENST00000263066 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 ZBTB22O15209 634 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 ESCO1Q5FWF5 840 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 ANKLE2Q86XL3 938 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 CHAF1AQ13111 956 aaPredicted RBP10.42□□□□□ -0.74
LDB3-201ENST00000263066 PREX2Q70Z35 1606 aa10.42□□□□□ -0.74
LDB3-201ENST00000263066 CRBNQ96SW2 442 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 ADGRF5Q8IZF2 1346 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
LDB3-201ENST00000263066 TPRNQ4KMQ1 711 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 PANK3Q9H999 370 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 YEATS2Q9ULM3 1422 aa10.41□□□□□ -0.74
LDB3-201ENST00000263066 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 MCM4P33991 863 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 KIF20AO95235 890 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 GBP4Q96PP9 640 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
LDB3-201ENST00000263066 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
LDB3-201ENST00000263066 DMTNQ08495 405 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
LDB3-201ENST00000263066 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 PSME1Q06323 249 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 CCDC66A2RUB6 948 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 ATF3P18847 181 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
LDB3-201ENST00000263066 ERICH4A6NGS2 130 aa10.38□□□□□ -0.75
LDB3-201ENST00000263066 CCDC94Q9BW85 323 aaPredicted RBP10.38□□□□□ -0.75
LDB3-201ENST00000263066 HDGFL2Q7Z4V5 671 aaPredicted RBP10.38□□□□□ -0.75
LDB3-201ENST00000263066 ZBTB9Q96C00 473 aa10.38□□□□□ -0.75
LDB3-201ENST00000263066 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
LDB3-201ENST00000263066 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
LDB3-201ENST00000263066 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
LDB3-201ENST00000263066 OFD1O75665 1012 aa10.37□□□□□ -0.75
LDB3-201ENST00000263066 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
LDB3-201ENST00000263066 CNPY4Q8N129 248 aa10.37□□□□□ -0.75
LDB3-201ENST00000263066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
LDB3-201ENST00000263066 CCDC146Q8IYE0 955 aa10.37□□□□□ -0.75
LDB3-201ENST00000263066 DDX49Q9Y6V7 483 aaKnown RBP10.37□□□□□ -0.75
LDB3-201ENST00000263066 FOXO3O43524 673 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 FBLN1P23142 703 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
LDB3-201ENST00000263066 DHX29Q7Z478 1369 aaKnown RBP10.36□□□□□ -0.75
LDB3-201ENST00000263066 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 MPNDQ8N594 471 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 USP47Q96K76 1375 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 ZNF526Q8TF50 670 aaPredicted RBP10.36□□□□□ -0.75
LDB3-201ENST00000263066 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 CHMP5Q9NZZ3 219 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
LDB3-201ENST00000263066 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
LDB3-201ENST00000263066 DNAJC2Q99543 621 aaKnown RBP10.35□□□□□ -0.75
LDB3-201ENST00000263066 U2AF1L5P0DN76 240 aaPredicted RBP10.35□□□□□ -0.75
LDB3-201ENST00000263066 U2AF1Q01081 240 aaKnown RBP eCLIP10.35□□□□□ -0.75
LDB3-201ENST00000263066 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
LDB3-201ENST00000263066 RRP7AQ9Y3A4 280 aaKnown RBP10.35□□□□□ -0.75
LDB3-201ENST00000263066 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 AMOTL2Q9Y2J4 779 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 CENPQQ7L2Z9 268 aaPredicted RBP10.34□□□□□ -0.75
LDB3-201ENST00000263066 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
LDB3-201ENST00000263066 PZPP20742 1482 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 AMPHP49418 695 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
LDB3-201ENST00000263066 UTP14CQ5TAP6 766 aaKnown RBP10.33□□□□□ -0.75
LDB3-201ENST00000263066 TEX2Q8IWB9 1127 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 RIPK4P57078 832 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
LDB3-201ENST00000263066 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms