RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
CIT-201ENST00000261833 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
CIT-201ENST00000261833 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
CIT-201ENST00000261833 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
CIT-201ENST00000261833 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
CIT-201ENST00000261833 SOX12O15370 315 aa11.84□□□□□ -0.51
CIT-201ENST00000261833 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
CIT-201ENST00000261833 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
CIT-201ENST00000261833 TPD52L1Q16890 204 aaPredicted RBP11.84□□□□□ -0.51
CIT-201ENST00000261833 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
CIT-201ENST00000261833 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
CIT-201ENST00000261833 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
CIT-201ENST00000261833 FRAT2O75474 233 aaPredicted RBP11.84□□□□□ -0.51
CIT-201ENST00000261833 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
CIT-201ENST00000261833 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
CIT-201ENST00000261833 CCAR2Q8N163 923 aaKnown RBP11.83□□□□□ -0.52
CIT-201ENST00000261833 CCDC141Q6ZP82 1450 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 UQCRHP07919 91 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
CIT-201ENST00000261833 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 KIF20BQ96Q89 1820 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 CAVIN1Q6NZI2 390 aaKnown RBP11.82□□□□□ -0.52
CIT-201ENST00000261833 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
CIT-201ENST00000261833 HSP90B2PQ58FF3 399 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 RABEP1Q15276 862 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 CDC45O75419 566 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 MYH6P13533 1939 aa11.81□□□□□ -0.52
CIT-201ENST00000261833 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
CIT-201ENST00000261833 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
CIT-201ENST00000261833 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
CIT-201ENST00000261833 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
CIT-201ENST00000261833 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
CIT-201ENST00000261833 BCL2L13Q9BXK5 485 aa11.8□□□□□ -0.52
CIT-201ENST00000261833 MYH8P13535 1937 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
CIT-201ENST00000261833 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 ANKRD50Q9ULJ7 1429 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 STK26Q9P289 416 aa11.79□□□□□ -0.52
CIT-201ENST00000261833 ESPNB1AK53 854 aa11.78□□□□□ -0.52
CIT-201ENST00000261833 LEKR1Q6ZMV7 388 aa11.78□□□□□ -0.52
CIT-201ENST00000261833 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
CIT-201ENST00000261833 FOXD4L6Q3SYB3 417 aaPredicted RBP11.78□□□□□ -0.52
CIT-201ENST00000261833 FOXD4L3Q6VB84 417 aaPredicted RBP11.78□□□□□ -0.52
CIT-201ENST00000261833 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
CIT-201ENST00000261833 ERCC4Q92889 916 aaPredicted RBP11.78□□□□□ -0.52
CIT-201ENST00000261833 DAPK1P53355 1430 aa11.78□□□□□ -0.52
CIT-201ENST00000261833 DNMT1P26358 1616 aaKnown RBP11.78□□□□□ -0.52
CIT-201ENST00000261833 GORABQ5T7V8 394 aa11.77□□□□□ -0.52
CIT-201ENST00000261833 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.52
CIT-201ENST00000261833 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
CIT-201ENST00000261833 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.535e-6■■■■□ 21.1
CIT-201ENST00000261833 PDCP20941 246 aa11.77□□□□□ -0.53
CIT-201ENST00000261833 APAF1O14727 1248 aa11.77□□□□□ -0.53
CIT-201ENST00000261833 ANO2Q9NQ90 1003 aa11.77□□□□□ -0.53
CIT-201ENST00000261833 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
CIT-201ENST00000261833 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
CIT-201ENST00000261833 EFCAB2Q5VUJ9 269 aa11.76□□□□□ -0.53
CIT-201ENST00000261833 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
CIT-201ENST00000261833 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
CIT-201ENST00000261833 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
CIT-201ENST00000261833 K7ELQ4 463 aaPredicted RBP11.75□□□□□ -0.53
CIT-201ENST00000261833 RDXP35241 583 aaKnown RBP11.75□□□□□ -0.53
CIT-201ENST00000261833 TSPYL1Q9H0U9 437 aa11.75□□□□□ -0.53
CIT-201ENST00000261833 PLEKHH1Q9ULM0 1364 aa11.75□□□□□ -0.53
CIT-201ENST00000261833 PDIA4P13667 645 aaKnown RBP11.75□□□□□ -0.53
CIT-201ENST00000261833 PSMA5P28066 241 aa11.75□□□□□ -0.53
CIT-201ENST00000261833 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
CIT-201ENST00000261833 APPP05067 770 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
CIT-201ENST00000261833 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 ERC2O15083 957 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 TRIM29Q14134 588 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 PES1O00541 588 aaKnown RBP11.74□□□□□ -0.53
CIT-201ENST00000261833 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
CIT-201ENST00000261833 CDR1P51861 262 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
CIT-201ENST00000261833 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
CIT-201ENST00000261833 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
CIT-201ENST00000261833 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
CIT-201ENST00000261833 CCDC73Q6ZRK6 1079 aa11.73□□□□□ -0.53
CIT-201ENST00000261833 PNISRQ8TF01 805 aaKnown RBP11.73□□□□□ -0.53
CIT-201ENST00000261833 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
CIT-201ENST00000261833 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
CIT-201ENST00000261833 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
CIT-201ENST00000261833 MCM4P33991 863 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms