RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
CASQ2-201ENST00000261448 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
CASQ2-201ENST00000261448 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
CASQ2-201ENST00000261448 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
CASQ2-201ENST00000261448 SRPK2P78362 688 aaKnown RBP15.79■□□□□ 0.12
CASQ2-201ENST00000261448 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
CASQ2-201ENST00000261448 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
CASQ2-201ENST00000261448 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
CASQ2-201ENST00000261448 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.78■□□□□ 0.12
CASQ2-201ENST00000261448 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
CASQ2-201ENST00000261448 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.11
CASQ2-201ENST00000261448 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.11
CASQ2-201ENST00000261448 DLC1Q96QB1 1528 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 METP08581 1390 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
CASQ2-201ENST00000261448 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 PLEKHH1Q9ULM0 1364 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 NINLQ9Y2I6 1382 aa15.76■□□□□ 0.11
CASQ2-201ENST00000261448 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
CASQ2-201ENST00000261448 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
CASQ2-201ENST00000261448 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
CASQ2-201ENST00000261448 ATAD2Q6PL18 1390 aa15.75■□□□□ 0.11
CASQ2-201ENST00000261448 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
CASQ2-201ENST00000261448 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
CASQ2-201ENST00000261448 UBR1Q8IWV7 1749 aa15.75■□□□□ 0.11
CASQ2-201ENST00000261448 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
CASQ2-201ENST00000261448 CD163L1Q9NR16 1453 aa15.74■□□□□ 0.11
CASQ2-201ENST00000261448 HDGFP51858 240 aaKnown RBP15.73■□□□□ 0.11
CASQ2-201ENST00000261448 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
CASQ2-201ENST00000261448 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
CASQ2-201ENST00000261448 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
CASQ2-201ENST00000261448 NSD2O96028 1365 aa15.72■□□□□ 0.11
CASQ2-201ENST00000261448 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
CASQ2-201ENST00000261448 MTHFSP49914 203 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 NLRP1Q9C000 1473 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 LTKP29376 864 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 TXNDC2Q86VQ3 553 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
CASQ2-201ENST00000261448 C3P01024 1663 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 SHPRHQ149N8 1683 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 APAF1O14727 1248 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 TECPR2O15040 1411 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 FYB1O15117 783 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
CASQ2-201ENST00000261448 RRP1P56182 461 aaKnown RBP15.67■□□□□ 0.1
CASQ2-201ENST00000261448 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CASQ2-201ENST00000261448 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
CASQ2-201ENST00000261448 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
CASQ2-201ENST00000261448 WASLO00401 505 aaPredicted RBP15.65■□□□□ 0.1
CASQ2-201ENST00000261448 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
CASQ2-201ENST00000261448 FER1L4A9Z1Z3 1794 aa15.65■□□□□ 0.1
CASQ2-201ENST00000261448 MED14O60244 1454 aa15.64■□□□□ 0.09
CASQ2-201ENST00000261448 CPS1P31327 1500 aa15.64■□□□□ 0.09
CASQ2-201ENST00000261448 ROBO2Q9HCK4 1378 aa15.63■□□□□ 0.09
CASQ2-201ENST00000261448 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
CASQ2-201ENST00000261448 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
CASQ2-201ENST00000261448 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
CASQ2-201ENST00000261448 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
CASQ2-201ENST00000261448 ATP7BP35670 1465 aa15.62■□□□□ 0.09
CASQ2-201ENST00000261448 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
CASQ2-201ENST00000261448 SLIT1O75093 1534 aa15.61■□□□□ 0.09
CASQ2-201ENST00000261448 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
CASQ2-201ENST00000261448 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
CASQ2-201ENST00000261448 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
CASQ2-201ENST00000261448 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
CASQ2-201ENST00000261448 NUDT16Q96DE0 195 aaKnown RBP15.6■□□□□ 0.09
CASQ2-201ENST00000261448 PTPRUQ92729 1446 aa15.59■□□□□ 0.09
CASQ2-201ENST00000261448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
CASQ2-201ENST00000261448 PLIN1O60240 522 aa15.58■□□□□ 0.08
CASQ2-201ENST00000261448 WWC1Q8IX03 1113 aa15.58■□□□□ 0.08
CASQ2-201ENST00000261448 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
CASQ2-201ENST00000261448 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
CASQ2-201ENST00000261448 THEMISQ8N1K5 641 aaPredicted RBP15.57■□□□□ 0.08
CASQ2-201ENST00000261448 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
CASQ2-201ENST00000261448 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
CASQ2-201ENST00000261448 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
CASQ2-201ENST00000261448 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
CASQ2-201ENST00000261448 KIF20BQ96Q89 1820 aa15.57■□□□□ 0.08
CASQ2-201ENST00000261448 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
CASQ2-201ENST00000261448 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.56■□□□□ 0.08
CASQ2-201ENST00000261448 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
CASQ2-201ENST00000261448 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
CASQ2-201ENST00000261448 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
CASQ2-201ENST00000261448 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
CASQ2-201ENST00000261448 EDC4Q6P2E9 1401 aaKnown RBP15.55■□□□□ 0.08
CASQ2-201ENST00000261448 E9PSI1 815 aa15.55■□□□□ 0.08
CASQ2-201ENST00000261448 FBLN1P23142 703 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms