RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
SORL1-201ENST00000260197 TRDNQ13061 729 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 SASS6Q6UVJ0 657 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 KIF1BO60333 1816 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 PLEKHH2Q8IVE3 1493 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 NUTM2DQ5VT03 806 aaPredicted RBP14.09□□□□□ -0.15
SORL1-201ENST00000260197 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
SORL1-201ENST00000260197 HSP90B2PQ58FF3 399 aa14.09□□□□□ -0.15
SORL1-201ENST00000260197 SLC4A3P48751 1232 aa14.08□□□□□ -0.16
SORL1-201ENST00000260197 CCDC9Q9Y3X0 531 aaKnown RBP14.08□□□□□ -0.16
SORL1-201ENST00000260197 TEFQ10587 303 aa14.08□□□□□ -0.16
SORL1-201ENST00000260197 VPS37DQ86XT2 251 aa14.08□□□□□ -0.16
SORL1-201ENST00000260197 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
SORL1-201ENST00000260197 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
SORL1-201ENST00000260197 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
SORL1-201ENST00000260197 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
SORL1-201ENST00000260197 CDR1P51861 262 aa14.07□□□□□ -0.16
SORL1-201ENST00000260197 SAFBQ15424 915 aaKnown RBP eCLIP14.07□□□□□ -0.16
SORL1-201ENST00000260197 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
SORL1-201ENST00000260197 APPP05067 770 aa14.07□□□□□ -0.16
SORL1-201ENST00000260197 CCP110O43303 1012 aa14.06□□□□□ -0.16
SORL1-201ENST00000260197 LETM1O95202 739 aaPredicted RBP14.06□□□□□ -0.16
SORL1-201ENST00000260197 MYH10P35580 1976 aa14.06□□□□□ -0.16
SORL1-201ENST00000260197 NFXL1Q6ZNB6 911 aa14.05□□□□□ -0.16
SORL1-201ENST00000260197 G3BP1Q13283 466 aaKnown RBP eCLIP14.05□□□□□ -0.168e-8■□□□□ 9.8
SORL1-201ENST00000260197 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
SORL1-201ENST00000260197 CDC45O75419 566 aa14.05□□□□□ -0.16
SORL1-201ENST00000260197 EPS15P42566 896 aa14.05□□□□□ -0.16
SORL1-201ENST00000260197 MNS1Q8NEH6 495 aa14.05□□□□□ -0.16
SORL1-201ENST00000260197 DIAPH1O60610 1272 aaKnown RBP14.04□□□□□ -0.16
SORL1-201ENST00000260197 PDCP20941 246 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 MYO6Q9UM54 1294 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
SORL1-201ENST00000260197 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 ERICH2A1L162 156 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 RIPK4P57078 832 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 GON4LQ3T8J9 2241 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 MRE11P49959 708 aa14.04□□□□□ -0.16
SORL1-201ENST00000260197 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SORL1-201ENST00000260197 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
SORL1-201ENST00000260197 PSMA5P28066 241 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 PTPRGP23470 1445 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 MBD3O95983 291 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
SORL1-201ENST00000260197 APAF1O14727 1248 aa14.02□□□□□ -0.16
SORL1-201ENST00000260197 GNAI1P63096 354 aa14.02□□□□□ -0.16
SORL1-201ENST00000260197 RDXP35241 583 aaKnown RBP14.02□□□□□ -0.16
SORL1-201ENST00000260197 DCTN1Q14203 1278 aa14.02□□□□□ -0.16
SORL1-201ENST00000260197 CALRP27797 417 aaKnown RBP14.02□□□□□ -0.16
SORL1-201ENST00000260197 NESP48681 1621 aa14.02□□□□□ -0.17
SORL1-201ENST00000260197 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.17
SORL1-201ENST00000260197 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.17
SORL1-201ENST00000260197 NAP1L1P55209 391 aaKnown RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 CAGE1Q8TC20 777 aa14.01□□□□□ -0.17
SORL1-201ENST00000260197 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 KINO60870 393 aaKnown RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 CFTRP13569 1480 aa14.01□□□□□ -0.17
SORL1-201ENST00000260197 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
SORL1-201ENST00000260197 CNTROBQ8N137 903 aa14□□□□□ -0.17
SORL1-201ENST00000260197 EIF2AK4Q9P2K8 1649 aaKnown RBP14□□□□□ -0.17
SORL1-201ENST00000260197 NFKBIBQ15653 356 aa14□□□□□ -0.17
SORL1-201ENST00000260197 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
SORL1-201ENST00000260197 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 FBXW7Q969H0 707 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
SORL1-201ENST00000260197 MCM2P49736 904 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 CT47A1Q5JQC4 288 aaPredicted RBP13.99□□□□□ -0.17
SORL1-201ENST00000260197 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
SORL1-201ENST00000260197 CCDC173Q0VFZ6 552 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 RABEP1Q15276 862 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
SORL1-201ENST00000260197 XBP1P17861 261 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 HIP1O00291 1037 aa13.98□□□□□ -0.17
SORL1-201ENST00000260197 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
SORL1-201ENST00000260197 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
SORL1-201ENST00000260197 CTDP1Q9Y5B0 961 aaPredicted RBP13.97□□□□□ -0.17
SORL1-201ENST00000260197 LNPKQ9C0E8 428 aa13.97□□□□□ -0.17
SORL1-201ENST00000260197 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
SORL1-201ENST00000260197 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
SORL1-201ENST00000260197 TRIM5Q9C035 493 aa13.96□□□□□ -0.17
SORL1-201ENST00000260197 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
SORL1-201ENST00000260197 SART3Q15020 963 aaKnown RBP13.96□□□□□ -0.18
SORL1-201ENST00000260197 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms