RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
CCNA1-201ENST00000255465 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
CCNA1-201ENST00000255465 STRCP1A6NGW2 1772 aa15.52■□□□□ 0.08
CCNA1-201ENST00000255465 RGL3Q3MIN7 710 aa15.52■□□□□ 0.07
CCNA1-201ENST00000255465 RPGRIP1LQ68CZ1 1315 aa15.51■□□□□ 0.07
CCNA1-201ENST00000255465 CLCN1P35523 988 aa15.51■□□□□ 0.07
CCNA1-201ENST00000255465 SLC26A8Q96RN1 970 aa15.51■□□□□ 0.07
CCNA1-201ENST00000255465 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
CCNA1-201ENST00000255465 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
CCNA1-201ENST00000255465 TPM2P07951 284 aa15.49■□□□□ 0.07
CCNA1-201ENST00000255465 L1TD1Q5T7N2 865 aaKnown RBP15.49■□□□□ 0.07
CCNA1-201ENST00000255465 CHD2O14647 1828 aaKnown RBP15.49■□□□□ 0.07
CCNA1-201ENST00000255465 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
CCNA1-201ENST00000255465 VGFO15240 615 aaPredicted RBP15.48■□□□□ 0.07
CCNA1-201ENST00000255465 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
CCNA1-201ENST00000255465 ADAMTS13Q76LX8 1427 aa15.48■□□□□ 0.07
CCNA1-201ENST00000255465 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
CCNA1-201ENST00000255465 DIP2AQ14689 1571 aa15.47■□□□□ 0.07
CCNA1-201ENST00000255465 MS4A1P11836 297 aa15.47■□□□□ 0.07
CCNA1-201ENST00000255465 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
CCNA1-201ENST00000255465 CERKQ8TCT0 537 aa15.47■□□□□ 0.07
CCNA1-201ENST00000255465 TBX22Q9Y458 520 aa15.47■□□□□ 0.07
CCNA1-201ENST00000255465 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.07
CCNA1-201ENST00000255465 CPS1P31327 1500 aa15.46■□□□□ 0.07
CCNA1-201ENST00000255465 NFKBIBQ15653 356 aa15.46■□□□□ 0.06
CCNA1-201ENST00000255465 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.06
CCNA1-201ENST00000255465 MAP7D2Q96T17 732 aa15.44■□□□□ 0.06
CCNA1-201ENST00000255465 SETD1AO15047 1707 aaKnown RBP15.44■□□□□ 0.06
CCNA1-201ENST00000255465 IRX6P78412 446 aaPredicted RBP15.44■□□□□ 0.06
CCNA1-201ENST00000255465 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
CCNA1-201ENST00000255465 IPO4Q8TEX9 1081 aaKnown RBP15.44■□□□□ 0.06
CCNA1-201ENST00000255465 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
CCNA1-201ENST00000255465 NWD1Q149M9 1564 aa15.43■□□□□ 0.06
CCNA1-201ENST00000255465 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
CCNA1-201ENST00000255465 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCNA1-201ENST00000255465 KCNA6P17658 529 aa15.42■□□□□ 0.06
CCNA1-201ENST00000255465 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
CCNA1-201ENST00000255465 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
CCNA1-201ENST00000255465 NAP1L2Q9ULW6 460 aaPredicted RBP15.41■□□□□ 0.06
CCNA1-201ENST00000255465 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 MYOM2P54296 1465 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 IQSEC2Q5JU85 1478 aa15.4■□□□□ 0.06
CCNA1-201ENST00000255465 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
CCNA1-201ENST00000255465 METP08581 1390 aa15.39■□□□□ 0.05
CCNA1-201ENST00000255465 DCAF11Q8TEB1 546 aa15.39■□□□□ 0.05
CCNA1-201ENST00000255465 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
CCNA1-201ENST00000255465 PTPRUQ92729 1446 aa15.39■□□□□ 0.05
CCNA1-201ENST00000255465 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
CCNA1-201ENST00000255465 NRXN1Q9ULB1 1477 aa15.38■□□□□ 0.05
CCNA1-201ENST00000255465 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
CCNA1-201ENST00000255465 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
CCNA1-201ENST00000255465 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
CCNA1-201ENST00000255465 SOCS7O14512 581 aa15.36■□□□□ 0.05
CCNA1-201ENST00000255465 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
CCNA1-201ENST00000255465 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
CCNA1-201ENST00000255465 LAMC1P11047 1609 aa15.36■□□□□ 0.05
CCNA1-201ENST00000255465 PROSER2Q86WR7 435 aaPredicted RBP15.35■□□□□ 0.05
CCNA1-201ENST00000255465 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
CCNA1-201ENST00000255465 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
CCNA1-201ENST00000255465 BBXQ8WY36 941 aaPredicted RBP15.35■□□□□ 0.05
CCNA1-201ENST00000255465 TMEM94Q12767 1356 aa15.33■□□□□ 0.05
CCNA1-201ENST00000255465 UTP14CQ5TAP6 766 aaKnown RBP15.33■□□□□ 0.05
CCNA1-201ENST00000255465 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.05
CCNA1-201ENST00000255465 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.05
CCNA1-201ENST00000255465 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.04
CCNA1-201ENST00000255465 TERF1P54274 439 aa15.33■□□□□ 0.04
CCNA1-201ENST00000255465 BACH2Q9BYV9 841 aa15.33■□□□□ 0.04
CCNA1-201ENST00000255465 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.04
CCNA1-201ENST00000255465 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
CCNA1-201ENST00000255465 L3MBTL2Q969R5 705 aa15.32■□□□□ 0.04
CCNA1-201ENST00000255465 BRD2P25440 801 aaKnown RBP15.31■□□□□ 0.04
CCNA1-201ENST00000255465 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
CCNA1-201ENST00000255465 TMEM132EQ6IEE7 984 aa15.31■□□□□ 0.04
CCNA1-201ENST00000255465 MTERF4Q7Z6M4 381 aaKnown RBP15.31■□□□□ 0.04
CCNA1-201ENST00000255465 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
CCNA1-201ENST00000255465 PDE4AP27815 886 aa15.29■□□□□ 0.04
CCNA1-201ENST00000255465 RGS3P49796 1198 aa15.29■□□□□ 0.04
CCNA1-201ENST00000255465 KIAA1210Q9ULL0 1709 aa15.29■□□□□ 0.04
CCNA1-201ENST00000255465 UBAP1LF5GYI3 381 aa15.29■□□□□ 0.04
CCNA1-201ENST00000255465 PRAG1Q86YV5 1406 aa15.28■□□□□ 0.04
CCNA1-201ENST00000255465 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
CCNA1-201ENST00000255465 LRPPRCP42704 1394 aaKnown RBP15.27■□□□□ 0.04
CCNA1-201ENST00000255465 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
CCNA1-201ENST00000255465 YTHDC2Q9H6S0 1430 aaKnown RBP15.27■□□□□ 0.04
CCNA1-201ENST00000255465 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.27■□□□□ 0.03
CCNA1-201ENST00000255465 STK26Q9P289 416 aa15.27■□□□□ 0.03
CCNA1-201ENST00000255465 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.03
CCNA1-201ENST00000255465 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
CCNA1-201ENST00000255465 TOM1O60784 492 aa15.26■□□□□ 0.03
CCNA1-201ENST00000255465 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
CCNA1-201ENST00000255465 NALCNQ8IZF0 1738 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 TECPR2O15040 1411 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 MSH6P52701 1360 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 ILDR2Q71H61 639 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
CCNA1-201ENST00000255465 C19orf44Q9H6X5 657 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms