RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
DCLK1-201ENST00000255448 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
DCLK1-201ENST00000255448 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
DCLK1-201ENST00000255448 CCDC112Q8NEF3 446 aa13.24□□□□□ -0.29
DCLK1-201ENST00000255448 KIF21BO75037 1637 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 G3V3G9 751 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 REC8O95072 547 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
DCLK1-201ENST00000255448 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
DCLK1-201ENST00000255448 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
DCLK1-201ENST00000255448 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
DCLK1-201ENST00000255448 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 PSME1Q06323 249 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 MBD3O95983 291 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 RUFY1Q96T51 708 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
DCLK1-201ENST00000255448 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 TPM1P09493 284 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
DCLK1-201ENST00000255448 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.29
DCLK1-201ENST00000255448 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
DCLK1-201ENST00000255448 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
DCLK1-201ENST00000255448 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.29
DCLK1-201ENST00000255448 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
DCLK1-201ENST00000255448 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
DCLK1-201ENST00000255448 ATF3P18847 181 aa13.2□□□□□ -0.3
DCLK1-201ENST00000255448 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
DCLK1-201ENST00000255448 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
DCLK1-201ENST00000255448 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
DCLK1-201ENST00000255448 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
DCLK1-201ENST00000255448 APAF1O14727 1248 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 CLSTN1O94985 981 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
DCLK1-201ENST00000255448 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 NESP48681 1621 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
DCLK1-201ENST00000255448 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
DCLK1-201ENST00000255448 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
DCLK1-201ENST00000255448 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
DCLK1-201ENST00000255448 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
DCLK1-201ENST00000255448 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
DCLK1-201ENST00000255448 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
DCLK1-201ENST00000255448 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
DCLK1-201ENST00000255448 CLCN1P35523 988 aa13.17□□□□□ -0.3
DCLK1-201ENST00000255448 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
DCLK1-201ENST00000255448 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
DCLK1-201ENST00000255448 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
DCLK1-201ENST00000255448 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
DCLK1-201ENST00000255448 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
DCLK1-201ENST00000255448 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
DCLK1-201ENST00000255448 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 DZIP1LQ8IYY4 767 aaKnown RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
DCLK1-201ENST00000255448 LETM1O95202 739 aaPredicted RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
DCLK1-201ENST00000255448 USP8P40818 1118 aa13.16□□□□□ -0.3
DCLK1-201ENST00000255448 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
DCLK1-201ENST00000255448 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
DCLK1-201ENST00000255448 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
DCLK1-201ENST00000255448 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
DCLK1-201ENST00000255448 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
DCLK1-201ENST00000255448 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
DCLK1-201ENST00000255448 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
DCLK1-201ENST00000255448 RIPK4P57078 832 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
DCLK1-201ENST00000255448 CDR1P51861 262 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
DCLK1-201ENST00000255448 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
DCLK1-201ENST00000255448 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
DCLK1-201ENST00000255448 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
DCLK1-201ENST00000255448 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
DCLK1-201ENST00000255448 GNAI1P63096 354 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
DCLK1-201ENST00000255448 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
DCLK1-201ENST00000255448 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 PDILTQ8N807 584 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
DCLK1-201ENST00000255448 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
DCLK1-201ENST00000255448 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
DCLK1-201ENST00000255448 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
DCLK1-201ENST00000255448 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
DCLK1-201ENST00000255448 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
DCLK1-201ENST00000255448 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
DCLK1-201ENST00000255448 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms