RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 MED14O60244 1454 aa23.46■■□□□ 1.35
PCCB-201ENST00000251654 CARD14Q9BXL6 1004 aa23.46■■□□□ 1.35
PCCB-201ENST00000251654 POGKQ9P215 609 aa23.46■■□□□ 1.35
PCCB-201ENST00000251654 ZNF142P52746 1687 aaPredicted RBP23.46■■□□□ 1.35
PCCB-201ENST00000251654 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
PCCB-201ENST00000251654 TMC1Q8TDI8 760 aa23.45■■□□□ 1.34
PCCB-201ENST00000251654 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
PCCB-201ENST00000251654 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
PCCB-201ENST00000251654 SLC12A5Q9H2X9 1139 aa23.44■■□□□ 1.34
PCCB-201ENST00000251654 PLEKHH1Q9ULM0 1364 aa23.44■■□□□ 1.34
PCCB-201ENST00000251654 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
PCCB-201ENST00000251654 USP32Q8NFA0 1604 aa23.43■■□□□ 1.34
PCCB-201ENST00000251654 THEMISQ8N1K5 641 aaPredicted RBP23.43■■□□□ 1.34
PCCB-201ENST00000251654 CABP2Q9NPB3 220 aa23.43■■□□□ 1.34
PCCB-201ENST00000251654 EID1Q9Y6B2 187 aa23.42■■□□□ 1.34
PCCB-201ENST00000251654 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
PCCB-201ENST00000251654 GTF3C3Q9Y5Q9 886 aa23.41■■□□□ 1.34
PCCB-201ENST00000251654 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
PCCB-201ENST00000251654 NINLQ9Y2I6 1382 aa23.4■■□□□ 1.34
PCCB-201ENST00000251654 ANKRD36BQ8N2N9 1353 aa23.39■■□□□ 1.34
PCCB-201ENST00000251654 NSD3Q9BZ95 1437 aa23.39■■□□□ 1.34
PCCB-201ENST00000251654 BCANQ96GW7 911 aa23.39■■□□□ 1.33
PCCB-201ENST00000251654 SETD1BQ9UPS6 1966 aaKnown RBP23.39■■□□□ 1.33
PCCB-201ENST00000251654 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
PCCB-201ENST00000251654 DIP2AQ14689 1571 aa23.38■■□□□ 1.33
PCCB-201ENST00000251654 SRPK2P78362 688 aaKnown RBP23.38■■□□□ 1.33
PCCB-201ENST00000251654 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
PCCB-201ENST00000251654 PPP2R1AP30153 589 aa23.34■■□□□ 1.33
PCCB-201ENST00000251654 CDK19Q9BWU1 502 aa23.34■■□□□ 1.33
PCCB-201ENST00000251654 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
PCCB-201ENST00000251654 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
PCCB-201ENST00000251654 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
PCCB-201ENST00000251654 SLC26A8Q96RN1 970 aa23.33■■□□□ 1.32
PCCB-201ENST00000251654 A0A1W2PP64 1363 aa23.32■■□□□ 1.32
PCCB-201ENST00000251654 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
PCCB-201ENST00000251654 TBX22Q9Y458 520 aa23.31■■□□□ 1.32
PCCB-201ENST00000251654 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
PCCB-201ENST00000251654 XRN1Q8IZH2 1706 aaKnown RBP23.29■■□□□ 1.32
PCCB-201ENST00000251654 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
PCCB-201ENST00000251654 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
PCCB-201ENST00000251654 PTCH1Q13635 1447 aa23.27■■□□□ 1.32
PCCB-201ENST00000251654 WASLO00401 505 aaPredicted RBP23.26■■□□□ 1.31
PCCB-201ENST00000251654 NSD2O96028 1365 aa23.26■■□□□ 1.31
PCCB-201ENST00000251654 ATP7BP35670 1465 aa23.26■■□□□ 1.31
PCCB-201ENST00000251654 INSRP06213 1382 aa23.25■■□□□ 1.31
PCCB-201ENST00000251654 TERF2IPQ9NYB0 399 aa23.24■■□□□ 1.31
PCCB-201ENST00000251654 ANKRD26Q9UPS8 1709 aa23.23■■□□□ 1.31
PCCB-201ENST00000251654 CABP1Q9NZU7 370 aa23.22■■□□□ 1.31
PCCB-201ENST00000251654 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
PCCB-201ENST00000251654 PIK3R4Q99570 1358 aa23.22■■□□□ 1.31
PCCB-201ENST00000251654 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
PCCB-201ENST00000251654 ANKLE2Q86XL3 938 aa23.21■■□□□ 1.31
PCCB-201ENST00000251654 PPIP5K1Q6PFW1 1433 aa23.19■■□□□ 1.3
PCCB-201ENST00000251654 KIF20BQ96Q89 1820 aa23.19■■□□□ 1.3
PCCB-201ENST00000251654 MORC1Q86VD1 984 aa23.19■■□□□ 1.3
PCCB-201ENST00000251654 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
PCCB-201ENST00000251654 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
PCCB-201ENST00000251654 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
PCCB-201ENST00000251654 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
PCCB-201ENST00000251654 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
PCCB-201ENST00000251654 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
PCCB-201ENST00000251654 NUDT16Q96DE0 195 aaKnown RBP23.16■■□□□ 1.3
PCCB-201ENST00000251654 PRR36Q9H6K5 1346 aa23.16■■□□□ 1.3
PCCB-201ENST00000251654 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
PCCB-201ENST00000251654 POLR3AO14802 1390 aaPredicted RBP23.15■■□□□ 1.3
PCCB-201ENST00000251654 ITSN1Q15811 1721 aa23.14■■□□□ 1.3
PCCB-201ENST00000251654 CCDC61Q9Y6R9 512 aa23.14■■□□□ 1.29
PCCB-201ENST00000251654 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
PCCB-201ENST00000251654 ADAMTS8Q9UP79 889 aa23.13■■□□□ 1.29
PCCB-201ENST00000251654 FYB1O15117 783 aa23.12■■□□□ 1.29
PCCB-201ENST00000251654 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
PCCB-201ENST00000251654 KCNA6P17658 529 aa23.12■■□□□ 1.29
PCCB-201ENST00000251654 TNNT2P45379 298 aaPredicted RBP23.11■■□□□ 1.29
PCCB-201ENST00000251654 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
PCCB-201ENST00000251654 WDR43Q15061 677 aaKnown RBP eCLIP23.1■■□□□ 1.29
PCCB-201ENST00000251654 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
PCCB-201ENST00000251654 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
PCCB-201ENST00000251654 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
PCCB-201ENST00000251654 NKTRP30414 1462 aaKnown RBP23.08■■□□□ 1.28
PCCB-201ENST00000251654 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
PCCB-201ENST00000251654 SMG6Q86US8 1419 aaKnown RBP23.07■■□□□ 1.28
PCCB-201ENST00000251654 NALCNQ8IZF0 1738 aa23.06■■□□□ 1.28
PCCB-201ENST00000251654 MTHFSP49914 203 aa23.05■■□□□ 1.28
PCCB-201ENST00000251654 RGPD8O14715 1765 aaPredicted RBP23.05■■□□□ 1.28
PCCB-201ENST00000251654 FMN2Q9NZ56 1722 aa23.04■■□□□ 1.28
PCCB-201ENST00000251654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
PCCB-201ENST00000251654 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
PCCB-201ENST00000251654 NWD1Q149M9 1564 aa23.02■■□□□ 1.28
PCCB-201ENST00000251654 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
PCCB-201ENST00000251654 ZNF692Q9BU19 519 aaPredicted RBP23.01■■□□□ 1.27
PCCB-201ENST00000251654 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
PCCB-201ENST00000251654 NUDCQ9Y266 331 aa23■■□□□ 1.27
PCCB-201ENST00000251654 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
PCCB-201ENST00000251654 ANKARQ7Z5J8 1434 aa23■■□□□ 1.27
PCCB-201ENST00000251654 ACEP12821 1306 aa22.98■■□□□ 1.27
PCCB-201ENST00000251654 USP6P35125 1406 aa22.98■■□□□ 1.27
PCCB-201ENST00000251654 CFAP53Q96M91 514 aa22.98■■□□□ 1.27
PCCB-201ENST00000251654 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
PCCB-201ENST00000251654 NME9Q86XW9 330 aa22.97■■□□□ 1.27
PCCB-201ENST00000251654 PDE3BQ13370 1112 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms