RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TMC1Q8TDI8 760 aa25.52■■□□□ 1.68
TNFSF9-201ENST00000245817 TBX22Q9Y458 520 aa25.52■■□□□ 1.68
TNFSF9-201ENST00000245817 SRPK2P78362 688 aaKnown RBP25.52■■□□□ 1.68
TNFSF9-201ENST00000245817 WAPLQ7Z5K2 1190 aa25.51■■□□□ 1.67
TNFSF9-201ENST00000245817 STRCQ7RTU9 1775 aa25.5■■□□□ 1.67
TNFSF9-201ENST00000245817 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
TNFSF9-201ENST00000245817 MRS2Q9HD23 443 aa25.48■■□□□ 1.67
TNFSF9-201ENST00000245817 CABP2Q9NPB3 220 aa25.48■■□□□ 1.67
TNFSF9-201ENST00000245817 MED14O60244 1454 aa25.48■■□□□ 1.67
TNFSF9-201ENST00000245817 FAM135BQ49AJ0 1406 aa25.47■■□□□ 1.67
TNFSF9-201ENST00000245817 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
TNFSF9-201ENST00000245817 TECPR2O15040 1411 aa25.47■■□□□ 1.67
TNFSF9-201ENST00000245817 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
TNFSF9-201ENST00000245817 CC2D1BQ5T0F9 858 aaKnown RBP25.46■■□□□ 1.67
TNFSF9-201ENST00000245817 DIP2AQ14689 1571 aa25.45■■□□□ 1.66
TNFSF9-201ENST00000245817 MYOM1P52179 1685 aa25.45■■□□□ 1.66
TNFSF9-201ENST00000245817 ATAD2Q6PL18 1390 aa25.45■■□□□ 1.66
TNFSF9-201ENST00000245817 CDK19Q9BWU1 502 aa25.44■■□□□ 1.66
TNFSF9-201ENST00000245817 SLC12A5Q9H2X9 1139 aa25.44■■□□□ 1.66
TNFSF9-201ENST00000245817 MYBBP1AQ9BQG0 1328 aaKnown RBP25.44■■□□□ 1.66
TNFSF9-201ENST00000245817 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
TNFSF9-201ENST00000245817 KNDC1Q76NI1 1749 aa25.42■■□□□ 1.66
TNFSF9-201ENST00000245817 NINLQ9Y2I6 1382 aa25.42■■□□□ 1.66
TNFSF9-201ENST00000245817 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
TNFSF9-201ENST00000245817 CPS1P31327 1500 aa25.41■■□□□ 1.66
TNFSF9-201ENST00000245817 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
TNFSF9-201ENST00000245817 CCDC184Q52MB2 194 aa25.39■■□□□ 1.65
TNFSF9-201ENST00000245817 ROBO2Q9HCK4 1378 aa25.38■■□□□ 1.65
TNFSF9-201ENST00000245817 AMER1Q5JTC6 1135 aaPredicted RBP25.38■■□□□ 1.65
TNFSF9-201ENST00000245817 PIK3R4Q99570 1358 aa25.37■■□□□ 1.65
TNFSF9-201ENST00000245817 WASLO00401 505 aaPredicted RBP25.37■■□□□ 1.65
TNFSF9-201ENST00000245817 NPC1L1Q9UHC9 1359 aa25.37■■□□□ 1.65
TNFSF9-201ENST00000245817 PTPRUQ92729 1446 aa25.36■■□□□ 1.65
TNFSF9-201ENST00000245817 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
TNFSF9-201ENST00000245817 NLRP13Q86W25 1043 aa25.35■■□□□ 1.65
TNFSF9-201ENST00000245817 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
TNFSF9-201ENST00000245817 ANKRD36BQ8N2N9 1353 aa25.35■■□□□ 1.65
TNFSF9-201ENST00000245817 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
TNFSF9-201ENST00000245817 FAM9BQ8IZU0 186 aa25.33■■□□□ 1.65
TNFSF9-201ENST00000245817 NSD3Q9BZ95 1437 aa25.32■■□□□ 1.64
TNFSF9-201ENST00000245817 HDGFL2Q7Z4V5 671 aaPredicted RBP25.32■■□□□ 1.64
TNFSF9-201ENST00000245817 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
TNFSF9-201ENST00000245817 CABP1Q9NZU7 370 aa25.29■■□□□ 1.64
TNFSF9-201ENST00000245817 CGNL1Q0VF96 1302 aa25.29■■□□□ 1.64
TNFSF9-201ENST00000245817 KCNA6P17658 529 aa25.26■■□□□ 1.63
TNFSF9-201ENST00000245817 NUDT16Q96DE0 195 aaKnown RBP25.26■■□□□ 1.63
TNFSF9-201ENST00000245817 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
TNFSF9-201ENST00000245817 CCDC61Q9Y6R9 512 aa25.24■■□□□ 1.63
TNFSF9-201ENST00000245817 PPP2R1AP30153 589 aa25.23■■□□□ 1.63
TNFSF9-201ENST00000245817 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
TNFSF9-201ENST00000245817 HNRNPUQ00839 825 aaKnown RBP eCLIP25.22■■□□□ 1.63
TNFSF9-201ENST00000245817 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
TNFSF9-201ENST00000245817 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
TNFSF9-201ENST00000245817 PNISRQ8TF01 805 aaKnown RBP25.21■■□□□ 1.63
TNFSF9-201ENST00000245817 ADGRB2O60241 1585 aa25.21■■□□□ 1.63
TNFSF9-201ENST00000245817 PPIP5K1Q6PFW1 1433 aa25.21■■□□□ 1.63
TNFSF9-201ENST00000245817 NSD2O96028 1365 aa25.21■■□□□ 1.63
TNFSF9-201ENST00000245817 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.63
TNFSF9-201ENST00000245817 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
TNFSF9-201ENST00000245817 ATP7BP35670 1465 aa25.19■■□□□ 1.62
TNFSF9-201ENST00000245817 USP32Q8NFA0 1604 aa25.18■■□□□ 1.62
TNFSF9-201ENST00000245817 CD163L1Q9NR16 1453 aa25.17■■□□□ 1.62
TNFSF9-201ENST00000245817 ZNF692Q9BU19 519 aaPredicted RBP25.15■■□□□ 1.62
TNFSF9-201ENST00000245817 NUTM2FA1L443 756 aa25.14■■□□□ 1.62
TNFSF9-201ENST00000245817 PRR36Q9H6K5 1346 aa25.14■■□□□ 1.61
TNFSF9-201ENST00000245817 STRCP1A6NGW2 1772 aa25.12■■□□□ 1.61
TNFSF9-201ENST00000245817 TNNT2P45379 298 aaPredicted RBP25.11■■□□□ 1.61
TNFSF9-201ENST00000245817 PROSER2Q86WR7 435 aaPredicted RBP25.11■■□□□ 1.61
TNFSF9-201ENST00000245817 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
TNFSF9-201ENST00000245817 CPSF1Q10570 1443 aaKnown RBP25.1■■□□□ 1.61
TNFSF9-201ENST00000245817 FYB1O15117 783 aa25.1■■□□□ 1.61
TNFSF9-201ENST00000245817 GGNBP2Q9H3C7 697 aa25.1■■□□□ 1.61
TNFSF9-201ENST00000245817 PLEKHG3A1L390 1219 aa25.09■■□□□ 1.61
TNFSF9-201ENST00000245817 C14orf37Q86TY3 774 aa25.09■■□□□ 1.61
TNFSF9-201ENST00000245817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.09■■□□□ 1.61
TNFSF9-201ENST00000245817 NKTRP30414 1462 aaKnown RBP25.08■■□□□ 1.61
TNFSF9-201ENST00000245817 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
TNFSF9-201ENST00000245817 CDC42BPGQ6DT37 1551 aa25.08■■□□□ 1.61
TNFSF9-201ENST00000245817 EDC4Q6P2E9 1401 aaKnown RBP25.08■■□□□ 1.6
TNFSF9-201ENST00000245817 ACEP12821 1306 aa25.05■■□□□ 1.6
TNFSF9-201ENST00000245817 ANKARQ7Z5J8 1434 aa25.05■■□□□ 1.6
TNFSF9-201ENST00000245817 LTBP4Q8N2S1 1624 aa25.05■■□□□ 1.6
TNFSF9-201ENST00000245817 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
TNFSF9-201ENST00000245817 NGDNQ8NEJ9 315 aaKnown RBP25.03■■□□□ 1.6
TNFSF9-201ENST00000245817 CFAP53Q96M91 514 aa25.03■■□□□ 1.6
TNFSF9-201ENST00000245817 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
TNFSF9-201ENST00000245817 ADGRL3Q9HAR2 1447 aa25.02■■□□□ 1.6
TNFSF9-201ENST00000245817 TMEM94Q12767 1356 aa25.01■■□□□ 1.6
TNFSF9-201ENST00000245817 ZBED9Q6R2W3 1325 aa25.01■■□□□ 1.59
TNFSF9-201ENST00000245817 PMFBP1Q8TBY8 1022 aa25.01■■□□□ 1.59
TNFSF9-201ENST00000245817 POLR3AO14802 1390 aaPredicted RBP25■■□□□ 1.59
TNFSF9-201ENST00000245817 INSRP06213 1382 aa25■■□□□ 1.59
TNFSF9-201ENST00000245817 MTHFSP49914 203 aa25■■□□□ 1.59
TNFSF9-201ENST00000245817 TOPAZ1Q8N9V7 1692 aa25■■□□□ 1.59
TNFSF9-201ENST00000245817 ITSN1Q15811 1721 aa24.99■■□□□ 1.59
TNFSF9-201ENST00000245817 NCOA3Q9Y6Q9 1424 aa24.99■■□□□ 1.59
TNFSF9-201ENST00000245817 COG3Q96JB2 828 aa24.97■■□□□ 1.59
TNFSF9-201ENST00000245817 NME9Q86XW9 330 aa24.97■■□□□ 1.59
TNFSF9-201ENST00000245817 ADAMTS8Q9UP79 889 aa24.97■■□□□ 1.59
TNFSF9-201ENST00000245817 NALCNQ8IZF0 1738 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms