RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
SNAI1-201ENST00000244050 ADGRB1O14514 1584 aa17.14■□□□□ 0.33
SNAI1-201ENST00000244050 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
SNAI1-201ENST00000244050 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
SNAI1-201ENST00000244050 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
SNAI1-201ENST00000244050 TMEM2Q9UHN6 1383 aa17.11■□□□□ 0.33
SNAI1-201ENST00000244050 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
SNAI1-201ENST00000244050 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
SNAI1-201ENST00000244050 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
SNAI1-201ENST00000244050 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
SNAI1-201ENST00000244050 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
SNAI1-201ENST00000244050 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
SNAI1-201ENST00000244050 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
SNAI1-201ENST00000244050 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
SNAI1-201ENST00000244050 PANK3Q9H999 370 aa17.07■□□□□ 0.32
SNAI1-201ENST00000244050 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
SNAI1-201ENST00000244050 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
SNAI1-201ENST00000244050 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
SNAI1-201ENST00000244050 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
SNAI1-201ENST00000244050 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
SNAI1-201ENST00000244050 INSRP06213 1382 aa17.06■□□□□ 0.32
SNAI1-201ENST00000244050 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
SNAI1-201ENST00000244050 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
SNAI1-201ENST00000244050 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
SNAI1-201ENST00000244050 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
SNAI1-201ENST00000244050 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
SNAI1-201ENST00000244050 MYOM1P52179 1685 aa17.04■□□□□ 0.32
SNAI1-201ENST00000244050 PHF23Q9BUL5 403 aaPredicted RBP17.01■□□□□ 0.31
SNAI1-201ENST00000244050 TMEM94Q12767 1356 aa17.01■□□□□ 0.31
SNAI1-201ENST00000244050 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNAI1-201ENST00000244050 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
SNAI1-201ENST00000244050 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
SNAI1-201ENST00000244050 KCNA6P17658 529 aa17■□□□□ 0.31
SNAI1-201ENST00000244050 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
SNAI1-201ENST00000244050 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
SNAI1-201ENST00000244050 HDGFP51858 240 aaKnown RBP16.99■□□□□ 0.31
SNAI1-201ENST00000244050 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
SNAI1-201ENST00000244050 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
SNAI1-201ENST00000244050 STK26Q9P289 416 aa16.98■□□□□ 0.31
SNAI1-201ENST00000244050 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
SNAI1-201ENST00000244050 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
SNAI1-201ENST00000244050 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
SNAI1-201ENST00000244050 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
SNAI1-201ENST00000244050 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.31
SNAI1-201ENST00000244050 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
SNAI1-201ENST00000244050 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
SNAI1-201ENST00000244050 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
SNAI1-201ENST00000244050 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
SNAI1-201ENST00000244050 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
SNAI1-201ENST00000244050 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
SNAI1-201ENST00000244050 TULP4Q9NRJ4 1543 aa16.93■□□□□ 0.3
SNAI1-201ENST00000244050 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNAI1-201ENST00000244050 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
SNAI1-201ENST00000244050 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
SNAI1-201ENST00000244050 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
SNAI1-201ENST00000244050 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
SNAI1-201ENST00000244050 POGKQ9P215 609 aa16.91■□□□□ 0.3
SNAI1-201ENST00000244050 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
SNAI1-201ENST00000244050 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
SNAI1-201ENST00000244050 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
SNAI1-201ENST00000244050 B4GALNT3Q6L9W6 998 aa16.88■□□□□ 0.29
SNAI1-201ENST00000244050 CHD2O14647 1828 aaKnown RBP16.87■□□□□ 0.29
SNAI1-201ENST00000244050 METP08581 1390 aa16.87■□□□□ 0.29
SNAI1-201ENST00000244050 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
SNAI1-201ENST00000244050 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
SNAI1-201ENST00000244050 MSH6P52701 1360 aa16.86■□□□□ 0.29
SNAI1-201ENST00000244050 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
SNAI1-201ENST00000244050 SENP3-EIF4A1A0A087X0R7 540 aa16.86■□□□□ 0.29
SNAI1-201ENST00000244050 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
SNAI1-201ENST00000244050 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
SNAI1-201ENST00000244050 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
SNAI1-201ENST00000244050 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
SNAI1-201ENST00000244050 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
SNAI1-201ENST00000244050 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
SNAI1-201ENST00000244050 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
SNAI1-201ENST00000244050 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
SNAI1-201ENST00000244050 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
SNAI1-201ENST00000244050 RRP1P56182 461 aaKnown RBP16.82■□□□□ 0.28
SNAI1-201ENST00000244050 MYT1Q01538 1121 aa16.82■□□□□ 0.28
SNAI1-201ENST00000244050 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 TECPR2O15040 1411 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
SNAI1-201ENST00000244050 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
SNAI1-201ENST00000244050 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
SNAI1-201ENST00000244050 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
SNAI1-201ENST00000244050 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNAI1-201ENST00000244050 ANKRD36BQ8N2N9 1353 aa16.79■□□□□ 0.28
SNAI1-201ENST00000244050 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
SNAI1-201ENST00000244050 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
SNAI1-201ENST00000244050 JCADQ9P266 1359 aa16.78■□□□□ 0.28
SNAI1-201ENST00000244050 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
SNAI1-201ENST00000244050 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
SNAI1-201ENST00000244050 PIK3R4Q99570 1358 aa16.78■□□□□ 0.28
SNAI1-201ENST00000244050 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
SNAI1-201ENST00000244050 PTPRUQ92729 1446 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms