RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ELL2O00472 640 aaPredicted RBP8.13□□□□□ -1.11
CSMD2-201ENST00000241312 KIF3BO15066 747 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 ERICH2A1L162 156 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 TEFQ10587 303 aa8.13□□□□□ -1.11
CSMD2-201ENST00000241312 G3BP1Q13283 466 aaKnown RBP eCLIP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 ODF2Q5BJF6 829 aa8.12□□□□□ -1.11
CSMD2-201ENST00000241312 CTDP1Q9Y5B0 961 aaPredicted RBP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 RALYLQ86SE5 291 aaKnown RBP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 MROH2BQ7Z745 1585 aa8.12□□□□□ -1.11
CSMD2-201ENST00000241312 OFD1O75665 1012 aa8.12□□□□□ -1.11
CSMD2-201ENST00000241312 DDX58O95786 925 aaKnown RBP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 KINO60870 393 aaKnown RBP8.12□□□□□ -1.11
CSMD2-201ENST00000241312 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 CNTLNQ9NXG0 1405 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 PIP4K2AP48426 406 aaPredicted RBP8.11□□□□□ -1.11
CSMD2-201ENST00000241312 LEKR1Q6ZMV7 388 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 TRIM5Q9C035 493 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 PSMA5P28066 241 aa8.11□□□□□ -1.11
CSMD2-201ENST00000241312 ZRSR2Q15696 482 aaKnown RBP8.1□□□□□ -1.11
CSMD2-201ENST00000241312 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
CSMD2-201ENST00000241312 GOLGA6L10A6NI86 522 aa8.1□□□□□ -1.11
CSMD2-201ENST00000241312 XBP1P17861 261 aa8.1□□□□□ -1.11
CSMD2-201ENST00000241312 SART3Q15020 963 aaKnown RBP8.09□□□□□ -1.11
CSMD2-201ENST00000241312 FKBP5Q13451 457 aaPredicted RBP8.09□□□□□ -1.11
CSMD2-201ENST00000241312 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 SDF4Q9BRK5 362 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 GNAI1P63096 354 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 RABEP1Q15276 862 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 GOLGA6L7A0A1B0GV03 622 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 TSPY26PQ9H489 355 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 VGFO15240 615 aaPredicted RBP8.09□□□□□ -1.11
CSMD2-201ENST00000241312 BRD4O60885 1362 aaPredicted RBP8.09□□□□□ -1.11
CSMD2-201ENST00000241312 CNKSR2Q8WXI2 1034 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 SMARCE1Q969G3 411 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 SMARCA4P51532 1647 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 HSP90AB2PQ58FF8 381 aa8.09□□□□□ -1.11
CSMD2-201ENST00000241312 RAD21O60216 631 aa8.09□□□□□ -1.12
CSMD2-201ENST00000241312 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.09□□□□□ -1.12
CSMD2-201ENST00000241312 SCAPERQ9BY12 1400 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
CSMD2-201ENST00000241312 MCM2P49736 904 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 TXLNBQ8N3L3 684 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 TSPYL1Q9H0U9 437 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 SMC2O95347 1197 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 RUNDC1Q96C34 613 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 KIAA0754O94854 1291 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 PDILTQ8N807 584 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 DIAPH1O60610 1272 aaKnown RBP8.08□□□□□ -1.12
CSMD2-201ENST00000241312 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 TRAK1Q9UPV9 953 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 AXDND1Q5T1B0 1012 aaPredicted RBP8.08□□□□□ -1.12
CSMD2-201ENST00000241312 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 MYOM3Q5VTT5 1437 aa8.08□□□□□ -1.12
CSMD2-201ENST00000241312 LUC7LQ9NQ29 371 aaKnown RBP8.08□□□□□ -1.12
CSMD2-201ENST00000241312 ERLIN2O94905 339 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 JMYQ8N9B5 988 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 TAF3Q5VWG9 929 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 CNTROBQ8N137 903 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 RIPK4P57078 832 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 INCENPQ9NQS7 918 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 APAF1O14727 1248 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 ZNF396Q96N95 335 aaPredicted RBP8.07□□□□□ -1.12
CSMD2-201ENST00000241312 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
CSMD2-201ENST00000241312 HIP1O00291 1037 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 CAVIN1Q6NZI2 390 aaKnown RBP8.07□□□□□ -1.12
CSMD2-201ENST00000241312 TXLNAP40222 546 aa8.07□□□□□ -1.12
CSMD2-201ENST00000241312 R3HCC1Q9Y3T6 440 aaKnown RBP8.06□□□□□ -1.12
CSMD2-201ENST00000241312 RRBP1Q9P2E9 1410 aaKnown RBP8.06□□□□□ -1.12
CSMD2-201ENST00000241312 ERLIN1O75477 346 aa8.06□□□□□ -1.12
CSMD2-201ENST00000241312 CCDC192P0DO97 292 aa8.06□□□□□ -1.12
CSMD2-201ENST00000241312 EIF2S2P20042 333 aaKnown RBP8.06□□□□□ -1.12
CSMD2-201ENST00000241312 MAGEC2Q9UBF1 373 aaPredicted RBP8.06□□□□□ -1.12
CSMD2-201ENST00000241312 CCDC7Q96M83 1385 aa8.06□□□□□ -1.12
CSMD2-201ENST00000241312 ZNHIT6Q9NWK9 470 aaKnown RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 CT47B1P0C2W7 299 aaPredicted RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 UBTFL1P0CB47 393 aaPredicted RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 HNRNPMP52272 730 aaKnown RBP eCLIP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 TDRD9Q8NDG6 1382 aaKnown RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 EIF3JO75822 258 aaKnown RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 EZRP15311 586 aaKnown RBP8.05□□□□□ -1.12
CSMD2-201ENST00000241312 FGD6Q6ZV73 1430 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 ANKRD18AQ8IVF6 992 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 RNF214Q8ND24 703 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 PKNOX2Q96KN3 472 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 FILIP1LQ4L180 1135 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 LNPKQ9C0E8 428 aa8.05□□□□□ -1.12
CSMD2-201ENST00000241312 RBM10P98175 930 aaKnown RBP8.04□□□□□ -1.12
CSMD2-201ENST00000241312 CCDC112Q8NEF3 446 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 FSD1Q9BTV5 496 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 KRI1Q8N9T8 703 aaKnown RBP8.04□□□□□ -1.12
CSMD2-201ENST00000241312 KDM4AO75164 1064 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 STIM1Q13586 685 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 USP8P40818 1118 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
CSMD2-201ENST00000241312 CDK5RAP3Q96JB5 506 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms