RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.33
IFT43-201ENST00000238628 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
IFT43-201ENST00000238628 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
IFT43-201ENST00000238628 MYOM2P54296 1465 aa12.96□□□□□ -0.34
IFT43-201ENST00000238628 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.34
IFT43-201ENST00000238628 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.34
IFT43-201ENST00000238628 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
IFT43-201ENST00000238628 A0A0G2JS52 829 aa12.95□□□□□ -0.34
IFT43-201ENST00000238628 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
IFT43-201ENST00000238628 MYT1Q01538 1121 aa12.95□□□□□ -0.34
IFT43-201ENST00000238628 RPRD2Q5VT52 1461 aaKnown RBP12.94□□□□□ -0.34
IFT43-201ENST00000238628 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
IFT43-201ENST00000238628 LAMC1P11047 1609 aa12.92□□□□□ -0.34
IFT43-201ENST00000238628 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
IFT43-201ENST00000238628 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.92□□□□□ -0.34
IFT43-201ENST00000238628 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
IFT43-201ENST00000238628 ADRA2BP18089 450 aa12.91□□□□□ -0.34
IFT43-201ENST00000238628 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
IFT43-201ENST00000238628 SLIT2O94813 1529 aa12.91□□□□□ -0.34
IFT43-201ENST00000238628 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
IFT43-201ENST00000238628 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
IFT43-201ENST00000238628 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
IFT43-201ENST00000238628 VPS72Q15906 364 aa12.9□□□□□ -0.34
IFT43-201ENST00000238628 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
IFT43-201ENST00000238628 METP08581 1390 aa12.89□□□□□ -0.35
IFT43-201ENST00000238628 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
IFT43-201ENST00000238628 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
IFT43-201ENST00000238628 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
IFT43-201ENST00000238628 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
IFT43-201ENST00000238628 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
IFT43-201ENST00000238628 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
IFT43-201ENST00000238628 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
IFT43-201ENST00000238628 FOXO3O43524 673 aa12.86□□□□□ -0.35
IFT43-201ENST00000238628 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
IFT43-201ENST00000238628 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
IFT43-201ENST00000238628 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
IFT43-201ENST00000238628 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
IFT43-201ENST00000238628 CAMKK2Q96RR4 588 aa12.84□□□□□ -0.35
IFT43-201ENST00000238628 RGPD1P0DJD0 1748 aa12.84□□□□□ -0.35
IFT43-201ENST00000238628 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
IFT43-201ENST00000238628 KCNQ2O43526 872 aa12.83□□□□□ -0.36
IFT43-201ENST00000238628 PXDNQ92626 1479 aa12.82□□□□□ -0.36
IFT43-201ENST00000238628 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
IFT43-201ENST00000238628 NRXN3Q9Y4C0 1643 aa12.81□□□□□ -0.36
IFT43-201ENST00000238628 E9PCH4 1651 aa12.81□□□□□ -0.36
IFT43-201ENST00000238628 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
IFT43-201ENST00000238628 APBA3O96018 575 aa12.81□□□□□ -0.36
IFT43-201ENST00000238628 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
IFT43-201ENST00000238628 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
IFT43-201ENST00000238628 TRIM37O94972 964 aa12.8□□□□□ -0.36
IFT43-201ENST00000238628 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
IFT43-201ENST00000238628 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
IFT43-201ENST00000238628 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
IFT43-201ENST00000238628 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
IFT43-201ENST00000238628 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
IFT43-201ENST00000238628 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
IFT43-201ENST00000238628 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
IFT43-201ENST00000238628 NUP155O75694 1391 aa12.76□□□□□ -0.37
IFT43-201ENST00000238628 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
IFT43-201ENST00000238628 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
IFT43-201ENST00000238628 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
IFT43-201ENST00000238628 TNS1Q9HBL0 1735 aaKnown RBP12.75□□□□□ -0.37
IFT43-201ENST00000238628 NWD2Q9ULI1 1742 aa12.74□□□□□ -0.37
IFT43-201ENST00000238628 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
IFT43-201ENST00000238628 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
IFT43-201ENST00000238628 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
IFT43-201ENST00000238628 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
IFT43-201ENST00000238628 ITGAEP38570 1179 aa12.73□□□□□ -0.37
IFT43-201ENST00000238628 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
IFT43-201ENST00000238628 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
IFT43-201ENST00000238628 CHD4Q14839 1912 aa12.72□□□□□ -0.37
IFT43-201ENST00000238628 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
IFT43-201ENST00000238628 CCDC144AA2RUR9 1427 aa12.7□□□□□ -0.38
IFT43-201ENST00000238628 PSME1Q06323 249 aa12.69□□□□□ -0.38
IFT43-201ENST00000238628 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
IFT43-201ENST00000238628 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
IFT43-201ENST00000238628 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
IFT43-201ENST00000238628 SYT17Q9BSW7 474 aa12.67□□□□□ -0.38
IFT43-201ENST00000238628 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
IFT43-201ENST00000238628 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
IFT43-201ENST00000238628 RREB1Q92766 1687 aa12.67□□□□□ -0.38
IFT43-201ENST00000238628 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
IFT43-201ENST00000238628 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
IFT43-201ENST00000238628 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
IFT43-201ENST00000238628 KIF1BO60333 1816 aa12.65□□□□□ -0.38
IFT43-201ENST00000238628 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
IFT43-201ENST00000238628 NAIPQ13075 1403 aa12.64□□□□□ -0.39
IFT43-201ENST00000238628 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
IFT43-201ENST00000238628 CEP350Q5VT06 3117 aa12.64□□□□□ -0.39
IFT43-201ENST00000238628 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
IFT43-201ENST00000238628 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
IFT43-201ENST00000238628 PTGER2P43116 358 aa12.63□□□□□ -0.39
IFT43-201ENST00000238628 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
IFT43-201ENST00000238628 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
IFT43-201ENST00000238628 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
IFT43-201ENST00000238628 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
IFT43-201ENST00000238628 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
IFT43-201ENST00000238628 GPR162Q16538 588 aa12.62□□□□□ -0.39
IFT43-201ENST00000238628 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
IFT43-201ENST00000238628 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms