RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 MVPQ14764 893 aaKnown RBP21.08■□□□□ 0.97
RAB35-201ENST00000229340 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.96
RAB35-201ENST00000229340 PRDM10Q9NQV6 1147 aa21.08■□□□□ 0.96
RAB35-201ENST00000229340 LAMC1P11047 1609 aa21.07■□□□□ 0.96
RAB35-201ENST00000229340 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.07■□□□□ 0.96
RAB35-201ENST00000229340 PPP1R9BQ96SB3 815 aa21.07■□□□□ 0.96
RAB35-201ENST00000229340 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
RAB35-201ENST00000229340 DDX49Q9Y6V7 483 aaKnown RBP21.07■□□□□ 0.96
RAB35-201ENST00000229340 AK9Q5TCS8 1911 aa21.06■□□□□ 0.96
RAB35-201ENST00000229340 NCLP19338 710 aaKnown RBP21.06■□□□□ 0.96
RAB35-201ENST00000229340 SKOR2Q2VWA4 1001 aaPredicted RBP21.06■□□□□ 0.96
RAB35-201ENST00000229340 RBM42Q9BTD8 480 aaKnown RBP21.06■□□□□ 0.96
RAB35-201ENST00000229340 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
RAB35-201ENST00000229340 NCOA3Q9Y6Q9 1424 aa21.06■□□□□ 0.96
RAB35-201ENST00000229340 ZMYM3Q14202 1370 aa21.05■□□□□ 0.96
RAB35-201ENST00000229340 ZBTB7CA1YPR0 619 aa21.05■□□□□ 0.96
RAB35-201ENST00000229340 CDCA8Q53HL2 280 aa21.05■□□□□ 0.96
RAB35-201ENST00000229340 CARD14Q9BXL6 1004 aa21.05■□□□□ 0.96
RAB35-201ENST00000229340 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
RAB35-201ENST00000229340 UQCRHLA0A096LP55 91 aa21.03■□□□□ 0.96
RAB35-201ENST00000229340 UQCRHP07919 91 aa21.03■□□□□ 0.96
RAB35-201ENST00000229340 DZIP1LQ8IYY4 767 aaKnown RBP21.03■□□□□ 0.96
RAB35-201ENST00000229340 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
RAB35-201ENST00000229340 LNPKQ9C0E8 428 aa21.03■□□□□ 0.96
RAB35-201ENST00000229340 EIF2AK4Q9P2K8 1649 aaKnown RBP21.02■□□□□ 0.96
RAB35-201ENST00000229340 PLXNC1O60486 1568 aa21.02■□□□□ 0.96
RAB35-201ENST00000229340 AAMPQ13685 434 aa21.02■□□□□ 0.96
RAB35-201ENST00000229340 ZHX1Q9UKY1 873 aaPredicted RBP21.02■□□□□ 0.96
RAB35-201ENST00000229340 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
RAB35-201ENST00000229340 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
RAB35-201ENST00000229340 SNX21Q969T3 373 aa21.01■□□□□ 0.95
RAB35-201ENST00000229340 SYNMO15061 1565 aa21■□□□□ 0.95
RAB35-201ENST00000229340 RBM25P49756 843 aaKnown RBP21■□□□□ 0.95
RAB35-201ENST00000229340 CIZ1Q9ULV3 898 aaPredicted RBP21■□□□□ 0.95
RAB35-201ENST00000229340 CAVIN1Q6NZI2 390 aaKnown RBP20.99■□□□□ 0.95
RAB35-201ENST00000229340 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
RAB35-201ENST00000229340 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
RAB35-201ENST00000229340 NGEFQ8N5V2 710 aa20.98■□□□□ 0.95
RAB35-201ENST00000229340 KIF2CQ99661 725 aa20.98■□□□□ 0.95
RAB35-201ENST00000229340 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
RAB35-201ENST00000229340 NUP160Q12769 1436 aa20.97■□□□□ 0.95
RAB35-201ENST00000229340 GOLGA6L22H0YM25 854 aa20.97■□□□□ 0.95
RAB35-201ENST00000229340 MCTP1Q6DN14 999 aa20.97■□□□□ 0.95
RAB35-201ENST00000229340 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.97■□□□□ 0.95
RAB35-201ENST00000229340 BAG4O95429 457 aaKnown RBP20.96■□□□□ 0.95
RAB35-201ENST00000229340 TRIM27P14373 513 aa20.96■□□□□ 0.95
RAB35-201ENST00000229340 MYOM1P52179 1685 aa20.96■□□□□ 0.95
RAB35-201ENST00000229340 RBSNQ9H1K0 784 aa20.96■□□□□ 0.95
RAB35-201ENST00000229340 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
RAB35-201ENST00000229340 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
RAB35-201ENST00000229340 KLHL40Q2TBA0 621 aa20.95■□□□□ 0.94
RAB35-201ENST00000229340 K7ELQ4 463 aaPredicted RBP20.94■□□□□ 0.94
RAB35-201ENST00000229340 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
RAB35-201ENST00000229340 RNF17Q9BXT8 1623 aaKnown RBP20.94■□□□□ 0.94
RAB35-201ENST00000229340 MORC1Q86VD1 984 aa20.93■□□□□ 0.94
RAB35-201ENST00000229340 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
RAB35-201ENST00000229340 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
RAB35-201ENST00000229340 MAP7D2Q96T17 732 aa20.93■□□□□ 0.94
RAB35-201ENST00000229340 NOL7Q9UMY1 257 aaKnown RBP20.92■□□□□ 0.94
RAB35-201ENST00000229340 WDR63Q8IWG1 891 aa20.92■□□□□ 0.94
RAB35-201ENST00000229340 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
RAB35-201ENST00000229340 ZSCAN23Q3MJ62 389 aa20.91■□□□□ 0.94
RAB35-201ENST00000229340 PTMSP20962 102 aa20.91■□□□□ 0.94
RAB35-201ENST00000229340 PRIM1P49642 420 aaKnown RBP20.91■□□□□ 0.94
RAB35-201ENST00000229340 EXOSC9Q06265 439 aaKnown RBP20.91■□□□□ 0.94
RAB35-201ENST00000229340 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
RAB35-201ENST00000229340 TERF1P54274 439 aa20.91■□□□□ 0.94
RAB35-201ENST00000229340 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
RAB35-201ENST00000229340 CHAMP1Q96JM3 812 aa20.91■□□□□ 0.94
RAB35-201ENST00000229340 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
RAB35-201ENST00000229340 SSH1Q8WYL5 1049 aa20.9■□□□□ 0.94
RAB35-201ENST00000229340 PKP1Q13835 747 aa20.9■□□□□ 0.94
RAB35-201ENST00000229340 POLR3AO14802 1390 aaPredicted RBP20.89■□□□□ 0.94
RAB35-201ENST00000229340 NOB1Q9ULX3 412 aaKnown RBP20.89■□□□□ 0.93
RAB35-201ENST00000229340 DDX19BQ9UMR2 479 aa20.89■□□□□ 0.93
RAB35-201ENST00000229340 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
RAB35-201ENST00000229340 ZNF500O60304 480 aaPredicted RBP20.88■□□□□ 0.93
RAB35-201ENST00000229340 TSC1Q92574 1164 aa20.88■□□□□ 0.93
RAB35-201ENST00000229340 MTHFSP49914 203 aa20.88■□□□□ 0.93
RAB35-201ENST00000229340 MPNDQ8N594 471 aa20.87■□□□□ 0.93
RAB35-201ENST00000229340 NUCB1Q02818 461 aa20.87■□□□□ 0.93
RAB35-201ENST00000229340 U2AF1L5P0DN76 240 aaPredicted RBP20.86■□□□□ 0.93
RAB35-201ENST00000229340 U2AF1Q01081 240 aaKnown RBP eCLIP20.86■□□□□ 0.93
RAB35-201ENST00000229340 ANKRD45Q5TZF3 282 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 CHD1LQ86WJ1 897 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 SMAP1Q8IYB5 467 aaPredicted RBP20.86■□□□□ 0.93
RAB35-201ENST00000229340 ATP10BO94823 1461 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 ZNF445P59923 1031 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 ATF7IPQ6VMQ6 1270 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 ZKSCAN5Q9Y2L8 839 aa20.86■□□□□ 0.93
RAB35-201ENST00000229340 RNF214Q8ND24 703 aa20.85■□□□□ 0.93
RAB35-201ENST00000229340 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
RAB35-201ENST00000229340 PRPF40AO75400 957 aaKnown RBP20.84■□□□□ 0.93
RAB35-201ENST00000229340 ARHGEF5Q12774 1597 aa20.84■□□□□ 0.93
RAB35-201ENST00000229340 SAMD9LQ8IVG5 1584 aa20.84■□□□□ 0.93
RAB35-201ENST00000229340 KDM5AP29375 1690 aaKnown RBP20.84■□□□□ 0.93
RAB35-201ENST00000229340 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
RAB35-201ENST00000229340 DYNC1I1O14576 645 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms