RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
GAPDH-201ENST00000229239 SLIT1O75093 1534 aa22.59■■□□□ 1.21
GAPDH-201ENST00000229239 VGFO15240 615 aaPredicted RBP22.58■■□□□ 1.21
GAPDH-201ENST00000229239 PDE3BQ13370 1112 aa22.58■■□□□ 1.21
GAPDH-201ENST00000229239 TMEM2Q9UHN6 1383 aa22.58■■□□□ 1.21
GAPDH-201ENST00000229239 NEXMIFQ5QGS0 1516 aa22.58■■□□□ 1.2
GAPDH-201ENST00000229239 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
GAPDH-201ENST00000229239 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
GAPDH-201ENST00000229239 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
GAPDH-201ENST00000229239 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
GAPDH-201ENST00000229239 TSHZ2Q9NRE2 1034 aa22.54■■□□□ 1.2
GAPDH-201ENST00000229239 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
GAPDH-201ENST00000229239 PPP2R1AP30153 589 aa22.51■■□□□ 1.19
GAPDH-201ENST00000229239 CPS1P31327 1500 aa22.51■■□□□ 1.19
GAPDH-201ENST00000229239 STRCP1A6NGW2 1772 aa22.5■■□□□ 1.19
GAPDH-201ENST00000229239 QRICH2Q9H0J4 1663 aa22.49■■□□□ 1.19
GAPDH-201ENST00000229239 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
GAPDH-201ENST00000229239 MYO5BQ9ULV0 1848 aa22.48■■□□□ 1.19
GAPDH-201ENST00000229239 TMEM131LA2VDJ0 1609 aa22.47■■□□□ 1.19
GAPDH-201ENST00000229239 HDGFP51858 240 aaKnown RBP22.47■■□□□ 1.19
GAPDH-201ENST00000229239 TRAK1Q9UPV9 953 aa22.45■■□□□ 1.19
GAPDH-201ENST00000229239 ARHGEF28Q8N1W1 1705 aaKnown RBP22.42■■□□□ 1.18
GAPDH-201ENST00000229239 RIMS2Q9UQ26 1411 aa22.42■■□□□ 1.18
GAPDH-201ENST00000229239 WDR43Q15061 677 aaKnown RBP eCLIP22.41■■□□□ 1.18
GAPDH-201ENST00000229239 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.41■■□□□ 1.18
GAPDH-201ENST00000229239 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
GAPDH-201ENST00000229239 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
GAPDH-201ENST00000229239 TMEM132EQ6IEE7 984 aa22.39■■□□□ 1.18
GAPDH-201ENST00000229239 CARD14Q9BXL6 1004 aa22.39■■□□□ 1.18
GAPDH-201ENST00000229239 EVC2Q86UK5 1308 aa22.39■■□□□ 1.18
GAPDH-201ENST00000229239 NUTM2DQ5VT03 806 aaPredicted RBP22.38■■□□□ 1.17
GAPDH-201ENST00000229239 SENP3Q9H4L4 574 aaPredicted RBP22.38■■□□□ 1.17
GAPDH-201ENST00000229239 UBAP1LF5GYI3 381 aa22.37■■□□□ 1.17
GAPDH-201ENST00000229239 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
GAPDH-201ENST00000229239 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
GAPDH-201ENST00000229239 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
GAPDH-201ENST00000229239 NINLQ9Y2I6 1382 aa22.37■■□□□ 1.17
GAPDH-201ENST00000229239 NGEFQ8N5V2 710 aa22.34■■□□□ 1.17
GAPDH-201ENST00000229239 ALKQ9UM73 1620 aa22.34■■□□□ 1.17
GAPDH-201ENST00000229239 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
GAPDH-201ENST00000229239 TULP4Q9NRJ4 1543 aa22.34■■□□□ 1.17
GAPDH-201ENST00000229239 NSD3Q9BZ95 1437 aa22.34■■□□□ 1.17
GAPDH-201ENST00000229239 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.17
GAPDH-201ENST00000229239 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
GAPDH-201ENST00000229239 NSD2O96028 1365 aa22.32■■□□□ 1.16
GAPDH-201ENST00000229239 KCNA6P17658 529 aa22.32■■□□□ 1.16
GAPDH-201ENST00000229239 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
GAPDH-201ENST00000229239 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
GAPDH-201ENST00000229239 ANKRD36BQ8N2N9 1353 aa22.3■■□□□ 1.16
GAPDH-201ENST00000229239 TOM1O60784 492 aa22.3■■□□□ 1.16
GAPDH-201ENST00000229239 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
GAPDH-201ENST00000229239 SLC12A5Q9H2X9 1139 aa22.28■■□□□ 1.16
GAPDH-201ENST00000229239 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
GAPDH-201ENST00000229239 YTHDC2Q9H6S0 1430 aaKnown RBP22.28■■□□□ 1.16
GAPDH-201ENST00000229239 CGNL1Q0VF96 1302 aa22.28■■□□□ 1.16
GAPDH-201ENST00000229239 NWD1Q149M9 1564 aa22.27■■□□□ 1.16
GAPDH-201ENST00000229239 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
GAPDH-201ENST00000229239 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
GAPDH-201ENST00000229239 ATAD2Q6PL18 1390 aa22.25■■□□□ 1.15
GAPDH-201ENST00000229239 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
GAPDH-201ENST00000229239 MORC1Q86VD1 984 aa22.25■■□□□ 1.15
GAPDH-201ENST00000229239 CDCA7LQ96GN5 454 aa22.25■■□□□ 1.15
GAPDH-201ENST00000229239 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
GAPDH-201ENST00000229239 DLC1Q96QB1 1528 aa22.25■■□□□ 1.15
GAPDH-201ENST00000229239 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
GAPDH-201ENST00000229239 PIP4K2BP78356 416 aa22.23■■□□□ 1.15
GAPDH-201ENST00000229239 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
GAPDH-201ENST00000229239 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
GAPDH-201ENST00000229239 PLEKHH1Q9ULM0 1364 aa22.22■■□□□ 1.15
GAPDH-201ENST00000229239 GOLGA2Q08379 1002 aa22.21■■□□□ 1.15
GAPDH-201ENST00000229239 CCDC136Q96JN2 1154 aa22.21■■□□□ 1.15
GAPDH-201ENST00000229239 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
GAPDH-201ENST00000229239 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
GAPDH-201ENST00000229239 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
GAPDH-201ENST00000229239 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
GAPDH-201ENST00000229239 POGKQ9P215 609 aa22.18■■□□□ 1.14
GAPDH-201ENST00000229239 STK26Q9P289 416 aa22.18■■□□□ 1.14
GAPDH-201ENST00000229239 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
GAPDH-201ENST00000229239 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
GAPDH-201ENST00000229239 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
GAPDH-201ENST00000229239 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
GAPDH-201ENST00000229239 DUSP27Q5VZP5 1158 aa22.16■■□□□ 1.14
GAPDH-201ENST00000229239 CFAP53Q96M91 514 aa22.16■■□□□ 1.14
GAPDH-201ENST00000229239 SRPK2P78362 688 aaKnown RBP22.15■■□□□ 1.14
GAPDH-201ENST00000229239 TERF2IPQ9NYB0 399 aa22.15■■□□□ 1.14
GAPDH-201ENST00000229239 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
GAPDH-201ENST00000229239 SETD1AO15047 1707 aaKnown RBP22.15■■□□□ 1.14
GAPDH-201ENST00000229239 HSPA1LP34931 641 aa22.15■■□□□ 1.14
GAPDH-201ENST00000229239 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
GAPDH-201ENST00000229239 SHPRHQ149N8 1683 aa22.14■■□□□ 1.14
GAPDH-201ENST00000229239 SLFN5Q08AF3 891 aa22.14■■□□□ 1.13
GAPDH-201ENST00000229239 NCBP3Q53F19 620 aaKnown RBP22.13■■□□□ 1.13
GAPDH-201ENST00000229239 A0A1W2PP64 1363 aa22.13■■□□□ 1.13
GAPDH-201ENST00000229239 APAF1O14727 1248 aa22.12■■□□□ 1.13
GAPDH-201ENST00000229239 METP08581 1390 aa22.12■■□□□ 1.13
GAPDH-201ENST00000229239 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
GAPDH-201ENST00000229239 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
GAPDH-201ENST00000229239 E9PSI1 815 aa22.11■■□□□ 1.13
GAPDH-201ENST00000229239 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
GAPDH-201ENST00000229239 CCDC146Q8IYE0 955 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms