RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 LNPKQ9C0E8 428 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 NLRP6P59044 892 aa16.52■□□□□ 0.23
LAMB1-201ENST00000222399 ANKRD20A12PQ8NF67 263 aa16.52■□□□□ 0.23
LAMB1-201ENST00000222399 GPRASP1Q5JY77 1395 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 MTHFSP49914 203 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 BICD2Q8TD16 824 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
LAMB1-201ENST00000222399 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 CDC45O75419 566 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 ADAMTS8Q9UP79 889 aa16.51■□□□□ 0.23
LAMB1-201ENST00000222399 RAD21O60216 631 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
LAMB1-201ENST00000222399 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 PANK1Q8TE04 598 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
LAMB1-201ENST00000222399 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
LAMB1-201ENST00000222399 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
LAMB1-201ENST00000222399 CCDC70Q6NSX1 233 aa16.49■□□□□ 0.23
LAMB1-201ENST00000222399 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
LAMB1-201ENST00000222399 CFTRP13569 1480 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
LAMB1-201ENST00000222399 GNAI3P08754 354 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 NUTM2GQ5VZR2 741 aa16.48■□□□□ 0.23
LAMB1-201ENST00000222399 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
LAMB1-201ENST00000222399 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
LAMB1-201ENST00000222399 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
LAMB1-201ENST00000222399 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
LAMB1-201ENST00000222399 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 PRM3Q9NNZ6 103 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
LAMB1-201ENST00000222399 PCMTD1Q96MG8 357 aaPredicted RBP16.46■□□□□ 0.23
LAMB1-201ENST00000222399 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
LAMB1-201ENST00000222399 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
LAMB1-201ENST00000222399 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
LAMB1-201ENST00000222399 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.23
LAMB1-201ENST00000222399 TNNT3P45378 269 aaPredicted RBP16.46■□□□□ 0.23
LAMB1-201ENST00000222399 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
LAMB1-201ENST00000222399 PSMA5P28066 241 aa16.45■□□□□ 0.22
LAMB1-201ENST00000222399 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
LAMB1-201ENST00000222399 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
LAMB1-201ENST00000222399 CCAR2Q8N163 923 aaKnown RBP16.45■□□□□ 0.22
LAMB1-201ENST00000222399 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
LAMB1-201ENST00000222399 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
LAMB1-201ENST00000222399 TXNDC2Q86VQ3 553 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 CCDC73Q6ZRK6 1079 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 GPS2Q13227 327 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 PRAM1Q96QH2 718 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
LAMB1-201ENST00000222399 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
LAMB1-201ENST00000222399 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
LAMB1-201ENST00000222399 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
LAMB1-201ENST00000222399 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
LAMB1-201ENST00000222399 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
LAMB1-201ENST00000222399 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
LAMB1-201ENST00000222399 BRMS1Q9HCU9 246 aa16.41■□□□□ 0.22
LAMB1-201ENST00000222399 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
LAMB1-201ENST00000222399 HIP1O00291 1037 aa16.41■□□□□ 0.22
LAMB1-201ENST00000222399 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
LAMB1-201ENST00000222399 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
LAMB1-201ENST00000222399 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 ZNF592Q92610 1267 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
LAMB1-201ENST00000222399 XBP1P17861 261 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
LAMB1-201ENST00000222399 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
LAMB1-201ENST00000222399 PDE3AQ14432 1141 aa16.39■□□□□ 0.21
LAMB1-201ENST00000222399 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
LAMB1-201ENST00000222399 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
LAMB1-201ENST00000222399 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
LAMB1-201ENST00000222399 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
LAMB1-201ENST00000222399 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
LAMB1-201ENST00000222399 THEMISQ8N1K5 641 aaPredicted RBP16.38■□□□□ 0.21
LAMB1-201ENST00000222399 TOP2BQ02880 1626 aa16.38■□□□□ 0.21
LAMB1-201ENST00000222399 FOSBP53539 338 aa16.38■□□□□ 0.21
LAMB1-201ENST00000222399 HSP90AA2PQ14568 343 aaPredicted RBP16.38■□□□□ 0.21
LAMB1-201ENST00000222399 CDCA7LQ96GN5 454 aa16.38■□□□□ 0.21
LAMB1-201ENST00000222399 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
LAMB1-201ENST00000222399 GNAI2P04899 355 aa16.37■□□□□ 0.21
LAMB1-201ENST00000222399 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
LAMB1-201ENST00000222399 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
LAMB1-201ENST00000222399 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
LAMB1-201ENST00000222399 SART3Q15020 963 aaKnown RBP16.37■□□□□ 0.21
LAMB1-201ENST00000222399 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
LAMB1-201ENST00000222399 MCM2P49736 904 aa16.36■□□□□ 0.21
LAMB1-201ENST00000222399 NAT10Q9H0A0 1025 aaKnown RBP16.36■□□□□ 0.21
LAMB1-201ENST00000222399 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms