RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 PLEKHH1Q9ULM0 1364 aa32.85■■■□□ 2.85
GSK3A-201ENST00000222330 TMC1Q8TDI8 760 aa32.85■■■□□ 2.85
GSK3A-201ENST00000222330 SLC12A5Q9H2X9 1139 aa32.83■■■□□ 2.85
GSK3A-201ENST00000222330 KNSTRNQ9Y448 316 aa32.82■■■□□ 2.84
GSK3A-201ENST00000222330 KTN1Q86UP2 1357 aaKnown RBP32.82■■■□□ 2.84
GSK3A-201ENST00000222330 ANKLE2Q86XL3 938 aa32.81■■■□□ 2.84
GSK3A-201ENST00000222330 DLC1Q96QB1 1528 aa32.8■■■□□ 2.84
GSK3A-201ENST00000222330 RALBP1Q15311 655 aa32.8■■■□□ 2.84
GSK3A-201ENST00000222330 NCKAP5LQ9HCH0 1330 aa32.79■■■□□ 2.84
GSK3A-201ENST00000222330 LMTK3Q96Q04 1460 aa32.79■■■□□ 2.84
GSK3A-201ENST00000222330 SRPK2P78362 688 aaKnown RBP32.79■■■□□ 2.84
GSK3A-201ENST00000222330 CARD14Q9BXL6 1004 aa32.78■■■□□ 2.84
GSK3A-201ENST00000222330 MED14O60244 1454 aa32.76■■■□□ 2.84
GSK3A-201ENST00000222330 PARD3Q8TEW0 1356 aa32.76■■■□□ 2.83
GSK3A-201ENST00000222330 AMER1Q5JTC6 1135 aaPredicted RBP32.75■■■□□ 2.83
GSK3A-201ENST00000222330 PUS7Q96PZ0 661 aaKnown RBP32.74■■■□□ 2.83
GSK3A-201ENST00000222330 MYBBP1AQ9BQG0 1328 aaKnown RBP32.73■■■□□ 2.83
GSK3A-201ENST00000222330 CDK19Q9BWU1 502 aa32.73■■■□□ 2.83
GSK3A-201ENST00000222330 FAM9BQ8IZU0 186 aa32.73■■■□□ 2.83
GSK3A-201ENST00000222330 TBX22Q9Y458 520 aa32.72■■■□□ 2.83
GSK3A-201ENST00000222330 TECPR2O15040 1411 aa32.71■■■□□ 2.83
GSK3A-201ENST00000222330 PTPRUQ92729 1446 aa32.7■■■□□ 2.83
GSK3A-201ENST00000222330 ROBO2Q9HCK4 1378 aa32.7■■■□□ 2.83
GSK3A-201ENST00000222330 KNDC1Q76NI1 1749 aa32.69■■■□□ 2.82
GSK3A-201ENST00000222330 SIRT1Q96EB6 747 aa32.68■■■□□ 2.82
GSK3A-201ENST00000222330 FAM135BQ49AJ0 1406 aa32.67■■■□□ 2.82
GSK3A-201ENST00000222330 AMOTL2Q9Y2J4 779 aa32.66■■■□□ 2.82
GSK3A-201ENST00000222330 CPS1P31327 1500 aa32.66■■■□□ 2.82
GSK3A-201ENST00000222330 NPHP4O75161 1426 aaPredicted RBP32.63■■■□□ 2.81
GSK3A-201ENST00000222330 NSD3Q9BZ95 1437 aa32.62■■■□□ 2.81
GSK3A-201ENST00000222330 NLRP13Q86W25 1043 aa32.61■■■□□ 2.81
GSK3A-201ENST00000222330 ATAD2Q6PL18 1390 aa32.61■■■□□ 2.81
GSK3A-201ENST00000222330 WASLO00401 505 aaPredicted RBP32.6■■■□□ 2.81
GSK3A-201ENST00000222330 BRD4O60885 1362 aaPredicted RBP32.59■■■□□ 2.81
GSK3A-201ENST00000222330 DIP2AQ14689 1571 aa32.58■■■□□ 2.81
GSK3A-201ENST00000222330 ANKRD36BQ8N2N9 1353 aa32.58■■■□□ 2.81
GSK3A-201ENST00000222330 CABP1Q9NZU7 370 aa32.58■■■□□ 2.81
GSK3A-201ENST00000222330 STRCQ7RTU9 1775 aa32.57■■■□□ 2.81
GSK3A-201ENST00000222330 NPC1L1Q9UHC9 1359 aa32.57■■■□□ 2.8
GSK3A-201ENST00000222330 HNRNPUQ00839 825 aaKnown RBP eCLIP32.57■■■□□ 2.8
GSK3A-201ENST00000222330 PNISRQ8TF01 805 aaKnown RBP32.57■■■□□ 2.8
GSK3A-201ENST00000222330 A0A1W2PP64 1363 aa32.54■■■□□ 2.8
GSK3A-201ENST00000222330 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.54■■■□□ 2.8
GSK3A-201ENST00000222330 PPP2R1AP30153 589 aa32.53■■■□□ 2.8
GSK3A-201ENST00000222330 NINLQ9Y2I6 1382 aa32.53■■■□□ 2.8
GSK3A-201ENST00000222330 KCNA6P17658 529 aa32.52■■■□□ 2.8
GSK3A-201ENST00000222330 CD163L1Q9NR16 1453 aa32.5■■■□□ 2.79
GSK3A-201ENST00000222330 TERF2IPQ9NYB0 399 aa32.49■■■□□ 2.79
GSK3A-201ENST00000222330 NUDT16Q96DE0 195 aaKnown RBP32.48■■■□□ 2.79
GSK3A-201ENST00000222330 CGNL1Q0VF96 1302 aa32.46■■■□□ 2.79
GSK3A-201ENST00000222330 PTCH1Q13635 1447 aa32.46■■■□□ 2.79
GSK3A-201ENST00000222330 NUTM2FA1L443 756 aa32.46■■■□□ 2.79
GSK3A-201ENST00000222330 XRN1Q8IZH2 1706 aaKnown RBP32.46■■■□□ 2.79
GSK3A-201ENST00000222330 PIK3R4Q99570 1358 aa32.45■■■□□ 2.79
GSK3A-201ENST00000222330 CHD2O14647 1828 aaKnown RBP32.45■■■□□ 2.78
GSK3A-201ENST00000222330 PRR36Q9H6K5 1346 aa32.43■■■□□ 2.78
GSK3A-201ENST00000222330 HDGFL2Q7Z4V5 671 aaPredicted RBP32.43■■■□□ 2.78
GSK3A-201ENST00000222330 TNNT2P45379 298 aaPredicted RBP32.43■■■□□ 2.78
GSK3A-201ENST00000222330 MORC1Q86VD1 984 aa32.43■■■□□ 2.78
GSK3A-201ENST00000222330 PPIP5K1Q6PFW1 1433 aa32.42■■■□□ 2.78
GSK3A-201ENST00000222330 RBM33Q96EV2 1170 aaKnown RBP32.42■■■□□ 2.78
GSK3A-201ENST00000222330 SENP3-EIF4A1A0A087X0R7 540 aa32.41■■■□□ 2.78
GSK3A-201ENST00000222330 CCDC61Q9Y6R9 512 aa32.41■■■□□ 2.78
GSK3A-201ENST00000222330 USP32Q8NFA0 1604 aa32.4■■■□□ 2.78
GSK3A-201ENST00000222330 ADGRB2O60241 1585 aa32.39■■■□□ 2.78
GSK3A-201ENST00000222330 ATP7BP35670 1465 aa32.37■■■□□ 2.77
GSK3A-201ENST00000222330 GGNBP2Q9H3C7 697 aa32.36■■■□□ 2.77
GSK3A-201ENST00000222330 AEBP2Q6ZN18 517 aaPredicted RBP32.35■■■□□ 2.77
GSK3A-201ENST00000222330 FYB1O15117 783 aa32.34■■■□□ 2.77
GSK3A-201ENST00000222330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.34■■■□□ 2.77
GSK3A-201ENST00000222330 STRCP1A6NGW2 1772 aa32.32■■■□□ 2.76
GSK3A-201ENST00000222330 NSD2O96028 1365 aa32.3■■■□□ 2.76
GSK3A-201ENST00000222330 CPSF1Q10570 1443 aaKnown RBP32.3■■■□□ 2.76
GSK3A-201ENST00000222330 CDC42BPGQ6DT37 1551 aa32.26■■■□□ 2.75
GSK3A-201ENST00000222330 ADAMTS8Q9UP79 889 aa32.25■■■□□ 2.75
GSK3A-201ENST00000222330 NWD1Q149M9 1564 aa32.25■■■□□ 2.75
GSK3A-201ENST00000222330 ZBED9Q6R2W3 1325 aa32.25■■■□□ 2.75
GSK3A-201ENST00000222330 ZNF335Q9H4Z2 1342 aaPredicted RBP32.25■■■□□ 2.75
GSK3A-201ENST00000222330 RGPD8O14715 1765 aaPredicted RBP32.23■■■□□ 2.75
GSK3A-201ENST00000222330 ACEP12821 1306 aa32.23■■■□□ 2.75
GSK3A-201ENST00000222330 PLEKHG3A1L390 1219 aa32.22■■■□□ 2.75
GSK3A-201ENST00000222330 MTHFSP49914 203 aa32.22■■■□□ 2.75
GSK3A-201ENST00000222330 PMFBP1Q8TBY8 1022 aa32.22■■■□□ 2.75
GSK3A-201ENST00000222330 TOPAZ1Q8N9V7 1692 aa32.22■■■□□ 2.75
GSK3A-201ENST00000222330 WDR43Q15061 677 aaKnown RBP eCLIP32.21■■■□□ 2.75
GSK3A-201ENST00000222330 PROSER2Q86WR7 435 aaPredicted RBP32.21■■■□□ 2.75
GSK3A-201ENST00000222330 EDC4Q6P2E9 1401 aaKnown RBP32.2■■■□□ 2.75
GSK3A-201ENST00000222330 NKTRP30414 1462 aaKnown RBP32.2■■■□□ 2.75
GSK3A-201ENST00000222330 NME9Q86XW9 330 aa32.2■■■□□ 2.75
GSK3A-201ENST00000222330 KIF20BQ96Q89 1820 aa32.2■■■□□ 2.74
GSK3A-201ENST00000222330 ZNF692Q9BU19 519 aaPredicted RBP32.19■■■□□ 2.74
GSK3A-201ENST00000222330 ITSN1Q15811 1721 aa32.19■■■□□ 2.74
GSK3A-201ENST00000222330 AKAP12Q02952 1782 aa32.19■■■□□ 2.74
GSK3A-201ENST00000222330 NALCNQ8IZF0 1738 aa32.19■■■□□ 2.74
GSK3A-201ENST00000222330 ZRANB1Q9UGI0 708 aa32.19■■■□□ 2.74
GSK3A-201ENST00000222330 MON2Q7Z3U7 1717 aa32.17■■■□□ 2.74
GSK3A-201ENST00000222330 DMRT2Q9Y5R5 561 aa32.17■■■□□ 2.74
GSK3A-201ENST00000222330 ANKRD26Q9UPS8 1709 aa32.17■■■□□ 2.74
GSK3A-201ENST00000222330 SALL2Q9Y467 1007 aaPredicted RBP32.17■■■□□ 2.74
GSK3A-201ENST00000222330 POLR3AO14802 1390 aaPredicted RBP32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms