RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
VSIG1-201ENST00000217957 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
VSIG1-201ENST00000217957 PPP1R15BQ5SWA1 713 aa11.82□□□□□ -0.52
VSIG1-201ENST00000217957 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
VSIG1-201ENST00000217957 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
VSIG1-201ENST00000217957 NAP1L5Q96NT1 182 aaPredicted RBP11.81□□□□□ -0.52
VSIG1-201ENST00000217957 WIZO95785 1651 aa11.8□□□□□ -0.52
VSIG1-201ENST00000217957 HIC1Q14526 733 aa11.8□□□□□ -0.52
VSIG1-201ENST00000217957 GORABQ5T7V8 394 aa11.79□□□□□ -0.52
VSIG1-201ENST00000217957 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
VSIG1-201ENST00000217957 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
VSIG1-201ENST00000217957 BIN2Q9UBW5 565 aaPredicted RBP11.78□□□□□ -0.52
VSIG1-201ENST00000217957 GNEQ9Y223 722 aaKnown RBP11.78□□□□□ -0.52
VSIG1-201ENST00000217957 ERCC5P28715 1186 aaPredicted RBP11.77□□□□□ -0.52
VSIG1-201ENST00000217957 NPAS4Q8IUM7 802 aa11.77□□□□□ -0.53
VSIG1-201ENST00000217957 NLRP6P59044 892 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 ANAPC15P60006 121 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 TMEM164Q5U3C3 297 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 NLGN1Q8N2Q7 840 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
VSIG1-201ENST00000217957 QPCTQ16769 361 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 PIF1Q9H611 641 aa11.76□□□□□ -0.53
VSIG1-201ENST00000217957 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
VSIG1-201ENST00000217957 OSBPP22059 807 aa11.75□□□□□ -0.53
VSIG1-201ENST00000217957 PDE6BP35913 854 aa11.74□□□□□ -0.53
VSIG1-201ENST00000217957 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
VSIG1-201ENST00000217957 ZMIZ1Q9ULJ6 1067 aa11.74□□□□□ -0.53
VSIG1-201ENST00000217957 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
VSIG1-201ENST00000217957 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
VSIG1-201ENST00000217957 LAS1LQ9Y4W2 734 aaKnown RBP11.73□□□□□ -0.53
VSIG1-201ENST00000217957 ABCC10Q5T3U5 1492 aa11.73□□□□□ -0.53
VSIG1-201ENST00000217957 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
VSIG1-201ENST00000217957 C7P10643 843 aa11.72□□□□□ -0.53
VSIG1-201ENST00000217957 GPR37L1O60883 481 aa11.72□□□□□ -0.53
VSIG1-201ENST00000217957 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
VSIG1-201ENST00000217957 LARGE2Q8N3Y3 721 aa11.72□□□□□ -0.53
VSIG1-201ENST00000217957 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
VSIG1-201ENST00000217957 PLCD4Q9BRC7 762 aa11.71□□□□□ -0.53
VSIG1-201ENST00000217957 G3BP2Q9UN86 482 aaKnown RBP11.71□□□□□ -0.53
VSIG1-201ENST00000217957 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
VSIG1-201ENST00000217957 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.54
VSIG1-201ENST00000217957 AP1G2O75843 785 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 DSG2Q14126 1118 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 CCDC144BQ3MJ40 725 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 PMFBP1Q8TBY8 1022 aa11.7□□□□□ -0.54
VSIG1-201ENST00000217957 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
VSIG1-201ENST00000217957 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
VSIG1-201ENST00000217957 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
VSIG1-201ENST00000217957 FCHSD2O94868 740 aa11.69□□□□□ -0.54
VSIG1-201ENST00000217957 PTGDRQ13258 359 aa11.68□□□□□ -0.54
VSIG1-201ENST00000217957 SF3A1Q15459 793 aaKnown RBP11.68□□□□□ -0.54
VSIG1-201ENST00000217957 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
VSIG1-201ENST00000217957 CDHR5Q9HBB8 845 aa11.68□□□□□ -0.54
VSIG1-201ENST00000217957 TMUB1Q9BVT8 246 aa11.68□□□□□ -0.54
VSIG1-201ENST00000217957 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
VSIG1-201ENST00000217957 CLCN1P35523 988 aa11.67□□□□□ -0.54
VSIG1-201ENST00000217957 hCG_2014768A0A024R1R8 64 aa11.67□□□□□ -0.54
VSIG1-201ENST00000217957 PAX3P23760 479 aa11.67□□□□□ -0.54
VSIG1-201ENST00000217957 TNNI2P48788 182 aa11.67□□□□□ -0.54
VSIG1-201ENST00000217957 TBC1D9Q6ZT07 1266 aa11.66□□□□□ -0.54
VSIG1-201ENST00000217957 DMGDHQ9UI17 866 aaKnown RBP11.66□□□□□ -0.54
VSIG1-201ENST00000217957 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
VSIG1-201ENST00000217957 PMM1Q92871 262 aa11.66□□□□□ -0.54
VSIG1-201ENST00000217957 PSME1Q06323 249 aa11.65□□□□□ -0.54
VSIG1-201ENST00000217957 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
VSIG1-201ENST00000217957 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
VSIG1-201ENST00000217957 TMA7Q9Y2S6 64 aaKnown RBP11.65□□□□□ -0.54
VSIG1-201ENST00000217957 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
VSIG1-201ENST00000217957 TCEAL1Q15170 157 aa11.65□□□□□ -0.54
VSIG1-201ENST00000217957 TMTC2Q8N394 836 aa11.65□□□□□ -0.54
VSIG1-201ENST00000217957 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
VSIG1-201ENST00000217957 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
VSIG1-201ENST00000217957 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
VSIG1-201ENST00000217957 HSP90AB4PQ58FF6 505 aa11.64□□□□□ -0.55
VSIG1-201ENST00000217957 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
VSIG1-201ENST00000217957 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
VSIG1-201ENST00000217957 SOWAHDA6NJG2 315 aa11.63□□□□□ -0.55
VSIG1-201ENST00000217957 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
VSIG1-201ENST00000217957 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
VSIG1-201ENST00000217957 ATG7O95352 703 aa11.62□□□□□ -0.55
VSIG1-201ENST00000217957 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
VSIG1-201ENST00000217957 PIK3R5Q8WYR1 880 aa11.61□□□□□ -0.55
VSIG1-201ENST00000217957 PRKAG2Q9UGJ0 569 aa11.61□□□□□ -0.55
VSIG1-201ENST00000217957 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
VSIG1-201ENST00000217957 PTPROQ16827 1216 aa11.61□□□□□ -0.55
VSIG1-201ENST00000217957 ZSWIM4Q9H7M6 989 aa11.61□□□□□ -0.55
VSIG1-201ENST00000217957 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
VSIG1-201ENST00000217957 PPRC1Q5VV67 1664 aaKnown RBP11.6□□□□□ -0.55
VSIG1-201ENST00000217957 DNAJA1P31689 397 aaKnown RBP11.6□□□□□ -0.55
VSIG1-201ENST00000217957 ZNF211Q13398 564 aaPredicted RBP11.6□□□□□ -0.55
VSIG1-201ENST00000217957 GJD4Q96KN9 370 aaPredicted RBP11.6□□□□□ -0.55
VSIG1-201ENST00000217957 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
VSIG1-201ENST00000217957 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
VSIG1-201ENST00000217957 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
VSIG1-201ENST00000217957 JAZF1Q86VZ6 243 aa11.59□□□□□ -0.55
VSIG1-201ENST00000217957 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms