RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPTLC2-201ENST00000216484 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
SPTLC2-201ENST00000216484 PLIN1O60240 522 aa17.51■□□□□ 0.39
SPTLC2-201ENST00000216484 NUCB2P80303 420 aa17.51■□□□□ 0.39
SPTLC2-201ENST00000216484 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
SPTLC2-201ENST00000216484 USP8P40818 1118 aa17.5■□□□□ 0.39
SPTLC2-201ENST00000216484 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
SPTLC2-201ENST00000216484 ZNHIT6Q9NWK9 470 aaKnown RBP17.49■□□□□ 0.39
SPTLC2-201ENST00000216484 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
SPTLC2-201ENST00000216484 RBM33Q96EV2 1170 aaKnown RBP17.49■□□□□ 0.39
SPTLC2-201ENST00000216484 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
SPTLC2-201ENST00000216484 KINO60870 393 aaKnown RBP17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 PPM1FP49593 454 aaPredicted RBP17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 RABEP1Q15276 862 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 ERICH4A6NGS2 130 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 TXLNAP40222 546 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 HSP90AB4PQ58FF6 505 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 PDCL3Q9H2J4 239 aa17.48■□□□□ 0.39
SPTLC2-201ENST00000216484 KRT18P05783 430 aaKnown RBP17.47■□□□□ 0.39
SPTLC2-201ENST00000216484 LRRCC1Q9C099 1032 aa17.47■□□□□ 0.39
SPTLC2-201ENST00000216484 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 LUC7LQ9NQ29 371 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 EIF3JO75822 258 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 CCDC112Q8NEF3 446 aa17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 TEFQ10587 303 aa17.46■□□□□ 0.39
SPTLC2-201ENST00000216484 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
SPTLC2-201ENST00000216484 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
SPTLC2-201ENST00000216484 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 NEBLO76041 1014 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
SPTLC2-201ENST00000216484 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
SPTLC2-201ENST00000216484 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
SPTLC2-201ENST00000216484 MAP2K1Q02750 393 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-201ENST00000216484 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
SPTLC2-201ENST00000216484 SERPINC1P01008 464 aa17.42■□□□□ 0.38
SPTLC2-201ENST00000216484 PKD2Q13563 968 aa17.42■□□□□ 0.38
SPTLC2-201ENST00000216484 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-201ENST00000216484 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
SPTLC2-201ENST00000216484 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
SPTLC2-201ENST00000216484 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 ATP2B1P20020 1258 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 STAMBPO95630 424 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 TANGO6Q9C0B7 1094 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 COG6Q9Y2V7 657 aa17.41■□□□□ 0.38
SPTLC2-201ENST00000216484 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 TSPY26PQ9H489 355 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 ERC2O15083 957 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
SPTLC2-201ENST00000216484 IQCEQ6IPM2 695 aa17.39■□□□□ 0.38
SPTLC2-201ENST00000216484 DDX23Q9BUQ8 820 aaKnown RBP17.39■□□□□ 0.38
SPTLC2-201ENST00000216484 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPTLC2-201ENST00000216484 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
SPTLC2-201ENST00000216484 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-201ENST00000216484 IBSPP21815 317 aaPredicted RBP17.39■□□□□ 0.37
SPTLC2-201ENST00000216484 DESP17661 470 aa17.39■□□□□ 0.37
SPTLC2-201ENST00000216484 TXLNBQ8N3L3 684 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 CCDC102AQ96A19 550 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 MRE11P49959 708 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 ERLIN1O75477 346 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 PSMA5P28066 241 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 STIM1Q13586 685 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 NLRP13Q86W25 1043 aa17.38■□□□□ 0.37
SPTLC2-201ENST00000216484 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
SPTLC2-201ENST00000216484 SSR1P43307 286 aaKnown RBP17.37■□□□□ 0.37
SPTLC2-201ENST00000216484 EEA1Q15075 1411 aa17.37■□□□□ 0.37
SPTLC2-201ENST00000216484 ANAPC15P60006 121 aa17.37■□□□□ 0.37
SPTLC2-201ENST00000216484 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
SPTLC2-201ENST00000216484 PUS7Q96PZ0 661 aaKnown RBP17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 CCDC113Q9H0I3 377 aa17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
SPTLC2-201ENST00000216484 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 GRIPAP1Q4V328 841 aa17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 E9PSI1 815 aa17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
SPTLC2-201ENST00000216484 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
SPTLC2-201ENST00000216484 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
SPTLC2-201ENST00000216484 SPATA24Q86W54 205 aa17.34■□□□□ 0.37
SPTLC2-201ENST00000216484 KIF3BO15066 747 aa17.33■□□□□ 0.37
SPTLC2-201ENST00000216484 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.37
SPTLC2-201ENST00000216484 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms