RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
SNAPC1-201ENST00000216294 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
SNAPC1-201ENST00000216294 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
SNAPC1-201ENST00000216294 TRAK1Q9UPV9 953 aa20.65■□□□□ 0.9
SNAPC1-201ENST00000216294 C8orf34Q49A92 452 aa20.65■□□□□ 0.9
SNAPC1-201ENST00000216294 RRP7AQ9Y3A4 280 aaKnown RBP20.65■□□□□ 0.9
SNAPC1-201ENST00000216294 KIF13AQ9H1H9 1805 aa20.64■□□□□ 0.89
SNAPC1-201ENST00000216294 ERVK-7P63135 1459 aa20.64■□□□□ 0.89
SNAPC1-201ENST00000216294 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
SNAPC1-201ENST00000216294 MLECQ14165 292 aa20.63■□□□□ 0.89
SNAPC1-201ENST00000216294 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
SNAPC1-201ENST00000216294 PREX1Q8TCU6 1659 aa20.62■□□□□ 0.89
SNAPC1-201ENST00000216294 ADGRB1O14514 1584 aa20.62■□□□□ 0.89
SNAPC1-201ENST00000216294 IGHDP01880 384 aa20.62■□□□□ 0.89
SNAPC1-201ENST00000216294 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
SNAPC1-201ENST00000216294 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
SNAPC1-201ENST00000216294 MYOM1P52179 1685 aa20.61■□□□□ 0.89
SNAPC1-201ENST00000216294 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
SNAPC1-201ENST00000216294 PANK1Q8TE04 598 aa20.6■□□□□ 0.89
SNAPC1-201ENST00000216294 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
SNAPC1-201ENST00000216294 TNNQ9UQP3 1299 aa20.6■□□□□ 0.89
SNAPC1-201ENST00000216294 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
SNAPC1-201ENST00000216294 NFKBIBQ15653 356 aa20.59■□□□□ 0.89
SNAPC1-201ENST00000216294 ASXL1Q8IXJ9 1541 aa20.59■□□□□ 0.89
SNAPC1-201ENST00000216294 KDM5AP29375 1690 aaKnown RBP20.59■□□□□ 0.89
SNAPC1-201ENST00000216294 AGLP35573 1532 aa20.58■□□□□ 0.89
SNAPC1-201ENST00000216294 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
SNAPC1-201ENST00000216294 FRAT1Q92837 279 aaPredicted RBP20.58■□□□□ 0.88
SNAPC1-201ENST00000216294 FAM161AQ3B820 660 aa20.57■□□□□ 0.88
SNAPC1-201ENST00000216294 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
SNAPC1-201ENST00000216294 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
SNAPC1-201ENST00000216294 SEC24BO95487 1268 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 TMEM131LA2VDJ0 1609 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 ARHGEF40Q8TER5 1519 aa20.55■□□□□ 0.88
SNAPC1-201ENST00000216294 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
SNAPC1-201ENST00000216294 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
SNAPC1-201ENST00000216294 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
SNAPC1-201ENST00000216294 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
SNAPC1-201ENST00000216294 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
SNAPC1-201ENST00000216294 DDRGK1Q96HY6 314 aa20.53■□□□□ 0.88
SNAPC1-201ENST00000216294 INSRP06213 1382 aa20.53■□□□□ 0.88
SNAPC1-201ENST00000216294 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
SNAPC1-201ENST00000216294 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
SNAPC1-201ENST00000216294 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
SNAPC1-201ENST00000216294 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.87
SNAPC1-201ENST00000216294 FRAT2O75474 233 aaPredicted RBP20.51■□□□□ 0.87
SNAPC1-201ENST00000216294 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
SNAPC1-201ENST00000216294 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
SNAPC1-201ENST00000216294 CLUAP1Q96AJ1 413 aa20.5■□□□□ 0.87
SNAPC1-201ENST00000216294 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
SNAPC1-201ENST00000216294 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
SNAPC1-201ENST00000216294 STK26Q9P289 416 aa20.49■□□□□ 0.87
SNAPC1-201ENST00000216294 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNAPC1-201ENST00000216294 WWC1Q8IX03 1113 aa20.49■□□□□ 0.87
SNAPC1-201ENST00000216294 E9PSI1 815 aa20.46■□□□□ 0.87
SNAPC1-201ENST00000216294 USP35Q9P2H5 1018 aa20.46■□□□□ 0.87
SNAPC1-201ENST00000216294 RLBP1P12271 317 aa20.46■□□□□ 0.87
SNAPC1-201ENST00000216294 ARHGEF28Q8N1W1 1705 aaKnown RBP20.45■□□□□ 0.86
SNAPC1-201ENST00000216294 GSE1Q14687 1217 aa20.45■□□□□ 0.86
SNAPC1-201ENST00000216294 SPATA31D1Q6ZQQ2 1576 aa20.45■□□□□ 0.86
SNAPC1-201ENST00000216294 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
SNAPC1-201ENST00000216294 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
SNAPC1-201ENST00000216294 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.43■□□□□ 0.86
SNAPC1-201ENST00000216294 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
SNAPC1-201ENST00000216294 USP19O94966 1318 aa20.42■□□□□ 0.86
SNAPC1-201ENST00000216294 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
SNAPC1-201ENST00000216294 A2ML1A8K2U0 1454 aa20.42■□□□□ 0.86
SNAPC1-201ENST00000216294 TCP11L2Q8N4U5 519 aa20.42■□□□□ 0.86
SNAPC1-201ENST00000216294 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
SNAPC1-201ENST00000216294 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
SNAPC1-201ENST00000216294 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
SNAPC1-201ENST00000216294 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
SNAPC1-201ENST00000216294 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
SNAPC1-201ENST00000216294 CABP2Q9NPB3 220 aa20.4■□□□□ 0.86
SNAPC1-201ENST00000216294 MTHFSP49914 203 aa20.39■□□□□ 0.85
SNAPC1-201ENST00000216294 SPRYD3Q8NCJ5 442 aa20.39■□□□□ 0.85
SNAPC1-201ENST00000216294 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
SNAPC1-201ENST00000216294 YTHDC2Q9H6S0 1430 aaKnown RBP20.38■□□□□ 0.85
SNAPC1-201ENST00000216294 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
SNAPC1-201ENST00000216294 PRAM1Q96QH2 718 aa20.37■□□□□ 0.85
SNAPC1-201ENST00000216294 PTPRMP28827 1452 aa20.37■□□□□ 0.85
SNAPC1-201ENST00000216294 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
SNAPC1-201ENST00000216294 MINK1Q8N4C8 1332 aaPredicted RBP20.35■□□□□ 0.85
SNAPC1-201ENST00000216294 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
SNAPC1-201ENST00000216294 ARXQ96QS3 562 aa20.34■□□□□ 0.85
SNAPC1-201ENST00000216294 POGKQ9P215 609 aa20.34■□□□□ 0.85
SNAPC1-201ENST00000216294 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
SNAPC1-201ENST00000216294 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
SNAPC1-201ENST00000216294 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
SNAPC1-201ENST00000216294 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
SNAPC1-201ENST00000216294 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
SNAPC1-201ENST00000216294 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
SNAPC1-201ENST00000216294 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNAPC1-201ENST00000216294 PDZRN3Q9UPQ7 1066 aa20.3■□□□□ 0.84
SNAPC1-201ENST00000216294 TNRQ92752 1358 aa20.3■□□□□ 0.84
SNAPC1-201ENST00000216294 PUS7Q96PZ0 661 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms