RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 LTKP29376 864 aa21.2■□□□□ 0.99
LAPTM4A-201ENST00000175091 SAFB2Q14151 953 aaKnown RBP eCLIP21.2■□□□□ 0.99
LAPTM4A-201ENST00000175091 NINLQ9Y2I6 1382 aa21.2■□□□□ 0.98
LAPTM4A-201ENST00000175091 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
LAPTM4A-201ENST00000175091 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
LAPTM4A-201ENST00000175091 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
LAPTM4A-201ENST00000175091 POGKQ9P215 609 aa21.19■□□□□ 0.98
LAPTM4A-201ENST00000175091 HNRNPUQ00839 825 aaKnown RBP eCLIP21.18■□□□□ 0.98
LAPTM4A-201ENST00000175091 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
LAPTM4A-201ENST00000175091 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
LAPTM4A-201ENST00000175091 PLEKHH1Q9ULM0 1364 aa21.17■□□□□ 0.98
LAPTM4A-201ENST00000175091 CARD14Q9BXL6 1004 aa21.17■□□□□ 0.98
LAPTM4A-201ENST00000175091 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
LAPTM4A-201ENST00000175091 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 SETD1BQ9UPS6 1966 aaKnown RBP21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 NSD3Q9BZ95 1437 aa21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 TXNDC2Q86VQ3 553 aa21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 THEMISQ8N1K5 641 aaPredicted RBP21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 PNISRQ8TF01 805 aaKnown RBP21.16■□□□□ 0.98
LAPTM4A-201ENST00000175091 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
LAPTM4A-201ENST00000175091 ADGRB2O60241 1585 aa21.15■□□□□ 0.98
LAPTM4A-201ENST00000175091 CABP2Q9NPB3 220 aa21.15■□□□□ 0.98
LAPTM4A-201ENST00000175091 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
LAPTM4A-201ENST00000175091 SIRT1Q96EB6 747 aa21.13■□□□□ 0.97
LAPTM4A-201ENST00000175091 GTF3C3Q9Y5Q9 886 aa21.13■□□□□ 0.97
LAPTM4A-201ENST00000175091 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
LAPTM4A-201ENST00000175091 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
LAPTM4A-201ENST00000175091 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
LAPTM4A-201ENST00000175091 WAPLQ7Z5K2 1190 aa21.11■□□□□ 0.97
LAPTM4A-201ENST00000175091 BCANQ96GW7 911 aa21.11■□□□□ 0.97
LAPTM4A-201ENST00000175091 PTPRUQ92729 1446 aa21.1■□□□□ 0.97
LAPTM4A-201ENST00000175091 ANKRD26Q9UPS8 1709 aa21.1■□□□□ 0.97
LAPTM4A-201ENST00000175091 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
LAPTM4A-201ENST00000175091 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
LAPTM4A-201ENST00000175091 ROBO2Q9HCK4 1378 aa21.09■□□□□ 0.97
LAPTM4A-201ENST00000175091 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.09■□□□□ 0.97
LAPTM4A-201ENST00000175091 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
LAPTM4A-201ENST00000175091 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
LAPTM4A-201ENST00000175091 CDK19Q9BWU1 502 aa21.08■□□□□ 0.96
LAPTM4A-201ENST00000175091 INSRP06213 1382 aa21.07■□□□□ 0.96
LAPTM4A-201ENST00000175091 ATP7BP35670 1465 aa21.07■□□□□ 0.96
LAPTM4A-201ENST00000175091 NSD2O96028 1365 aa21.06■□□□□ 0.96
LAPTM4A-201ENST00000175091 TBX22Q9Y458 520 aa21.06■□□□□ 0.96
LAPTM4A-201ENST00000175091 KIF20BQ96Q89 1820 aa21.06■□□□□ 0.96
LAPTM4A-201ENST00000175091 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
LAPTM4A-201ENST00000175091 TOPAZ1Q8N9V7 1692 aa21.05■□□□□ 0.96
LAPTM4A-201ENST00000175091 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
LAPTM4A-201ENST00000175091 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
LAPTM4A-201ENST00000175091 MON2Q7Z3U7 1717 aa21.02■□□□□ 0.96
LAPTM4A-201ENST00000175091 WASLO00401 505 aaPredicted RBP21.02■□□□□ 0.96
LAPTM4A-201ENST00000175091 AKAP12Q02952 1782 aa21.02■□□□□ 0.95
LAPTM4A-201ENST00000175091 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.95
LAPTM4A-201ENST00000175091 PIK3R4Q99570 1358 aa21.01■□□□□ 0.95
LAPTM4A-201ENST00000175091 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
LAPTM4A-201ENST00000175091 CHD2O14647 1828 aaKnown RBP21■□□□□ 0.95
LAPTM4A-201ENST00000175091 TERF2IPQ9NYB0 399 aa21■□□□□ 0.95
LAPTM4A-201ENST00000175091 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
LAPTM4A-201ENST00000175091 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
LAPTM4A-201ENST00000175091 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
LAPTM4A-201ENST00000175091 CPSF1Q10570 1443 aaKnown RBP20.96■□□□□ 0.95
LAPTM4A-201ENST00000175091 ANKLE2Q86XL3 938 aa20.96■□□□□ 0.95
LAPTM4A-201ENST00000175091 CABP1Q9NZU7 370 aa20.96■□□□□ 0.95
LAPTM4A-201ENST00000175091 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
LAPTM4A-201ENST00000175091 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
LAPTM4A-201ENST00000175091 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
LAPTM4A-201ENST00000175091 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
LAPTM4A-201ENST00000175091 NUDT16Q96DE0 195 aaKnown RBP20.92■□□□□ 0.94
LAPTM4A-201ENST00000175091 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
LAPTM4A-201ENST00000175091 EDC4Q6P2E9 1401 aaKnown RBP20.91■□□□□ 0.94
LAPTM4A-201ENST00000175091 NALCNQ8IZF0 1738 aa20.91■□□□□ 0.94
LAPTM4A-201ENST00000175091 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
LAPTM4A-201ENST00000175091 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
LAPTM4A-201ENST00000175091 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
LAPTM4A-201ENST00000175091 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
LAPTM4A-201ENST00000175091 NWD1Q149M9 1564 aa20.89■□□□□ 0.94
LAPTM4A-201ENST00000175091 WDR43Q15061 677 aaKnown RBP eCLIP20.88■□□□□ 0.93
LAPTM4A-201ENST00000175091 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
LAPTM4A-201ENST00000175091 FYB1O15117 783 aa20.87■□□□□ 0.93
LAPTM4A-201ENST00000175091 ADAMTS8Q9UP79 889 aa20.87■□□□□ 0.93
LAPTM4A-201ENST00000175091 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
LAPTM4A-201ENST00000175091 KCNA6P17658 529 aa20.87■□□□□ 0.93
LAPTM4A-201ENST00000175091 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
LAPTM4A-201ENST00000175091 GGNBP2Q9H3C7 697 aa20.85■□□□□ 0.93
LAPTM4A-201ENST00000175091 TNNT2P45379 298 aaPredicted RBP20.85■□□□□ 0.93
LAPTM4A-201ENST00000175091 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
LAPTM4A-201ENST00000175091 ANKARQ7Z5J8 1434 aa20.83■□□□□ 0.93
LAPTM4A-201ENST00000175091 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
LAPTM4A-201ENST00000175091 MTHFSP49914 203 aa20.81■□□□□ 0.92
LAPTM4A-201ENST00000175091 PLEKHG3A1L390 1219 aa20.8■□□□□ 0.92
LAPTM4A-201ENST00000175091 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
LAPTM4A-201ENST00000175091 USP6P35125 1406 aa20.79■□□□□ 0.92
LAPTM4A-201ENST00000175091 ZNF692Q9BU19 519 aaPredicted RBP20.79■□□□□ 0.92
LAPTM4A-201ENST00000175091 MAP2P11137 1827 aaKnown RBP20.78■□□□□ 0.92
LAPTM4A-201ENST00000175091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.92
LAPTM4A-201ENST00000175091 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
LAPTM4A-201ENST00000175091 ADGRL3Q9HAR2 1447 aa20.78■□□□□ 0.92
LAPTM4A-201ENST00000175091 CFAP53Q96M91 514 aa20.77■□□□□ 0.92
LAPTM4A-201ENST00000175091 ACEP12821 1306 aa20.76■□□□□ 0.91
LAPTM4A-201ENST00000175091 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
LAPTM4A-201ENST00000175091 SSH2Q76I76 1423 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms