RNA–Protein interactions for RNA: ENST00000157812.6

PSMC4-201, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-201ENST00000157812 TBX22Q9Y458 520 aa18■□□□□ 0.47
PSMC4-201ENST00000157812 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
PSMC4-201ENST00000157812 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
PSMC4-201ENST00000157812 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
PSMC4-201ENST00000157812 DISP3Q9P2K9 1392 aa17.98■□□□□ 0.47
PSMC4-201ENST00000157812 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
PSMC4-201ENST00000157812 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
PSMC4-201ENST00000157812 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
PSMC4-201ENST00000157812 METP08581 1390 aa17.96■□□□□ 0.47
PSMC4-201ENST00000157812 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
PSMC4-201ENST00000157812 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
PSMC4-201ENST00000157812 STK26Q9P289 416 aa17.94■□□□□ 0.46
PSMC4-201ENST00000157812 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
PSMC4-201ENST00000157812 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
PSMC4-201ENST00000157812 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
PSMC4-201ENST00000157812 QRICH2Q9H0J4 1663 aa17.91■□□□□ 0.46
PSMC4-201ENST00000157812 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
PSMC4-201ENST00000157812 XRN1Q8IZH2 1706 aaKnown RBP17.91■□□□□ 0.46
PSMC4-201ENST00000157812 TSHZ2Q9NRE2 1034 aa17.91■□□□□ 0.46
PSMC4-201ENST00000157812 ABCC11Q96J66 1382 aa17.9■□□□□ 0.46
PSMC4-201ENST00000157812 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
PSMC4-201ENST00000157812 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
PSMC4-201ENST00000157812 CPS1P31327 1500 aa17.9■□□□□ 0.46
PSMC4-201ENST00000157812 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
PSMC4-201ENST00000157812 TECPR2O15040 1411 aa17.88■□□□□ 0.45
PSMC4-201ENST00000157812 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
PSMC4-201ENST00000157812 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
PSMC4-201ENST00000157812 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
PSMC4-201ENST00000157812 PANK3Q9H999 370 aa17.87■□□□□ 0.45
PSMC4-201ENST00000157812 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
PSMC4-201ENST00000157812 POGKQ9P215 609 aa17.87■□□□□ 0.45
PSMC4-201ENST00000157812 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
PSMC4-201ENST00000157812 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
PSMC4-201ENST00000157812 KCNA6P17658 529 aa17.85■□□□□ 0.45
PSMC4-201ENST00000157812 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
PSMC4-201ENST00000157812 PRAM1Q96QH2 718 aa17.85■□□□□ 0.45
PSMC4-201ENST00000157812 PTCH1Q13635 1447 aa17.85■□□□□ 0.45
PSMC4-201ENST00000157812 FAM135BQ49AJ0 1406 aa17.85■□□□□ 0.45
PSMC4-201ENST00000157812 STRCP1A6NGW2 1772 aa17.84■□□□□ 0.45
PSMC4-201ENST00000157812 MYOM1P52179 1685 aa17.84■□□□□ 0.45
PSMC4-201ENST00000157812 KNSTRNQ9Y448 316 aa17.83■□□□□ 0.44
PSMC4-201ENST00000157812 BLMP54132 1417 aaPredicted RBP17.83■□□□□ 0.44
PSMC4-201ENST00000157812 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
PSMC4-201ENST00000157812 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
PSMC4-201ENST00000157812 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.44
PSMC4-201ENST00000157812 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
PSMC4-201ENST00000157812 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
PSMC4-201ENST00000157812 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
PSMC4-201ENST00000157812 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
PSMC4-201ENST00000157812 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.43
PSMC4-201ENST00000157812 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
PSMC4-201ENST00000157812 AMER1Q5JTC6 1135 aaPredicted RBP17.76■□□□□ 0.43
PSMC4-201ENST00000157812 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
PSMC4-201ENST00000157812 PROSER2Q86WR7 435 aaPredicted RBP17.76■□□□□ 0.43
PSMC4-201ENST00000157812 ADGRB2O60241 1585 aa17.75■□□□□ 0.43
PSMC4-201ENST00000157812 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
PSMC4-201ENST00000157812 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
PSMC4-201ENST00000157812 PUS7Q96PZ0 661 aaKnown RBP17.74■□□□□ 0.43
PSMC4-201ENST00000157812 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
PSMC4-201ENST00000157812 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
PSMC4-201ENST00000157812 MYT1Q01538 1121 aa17.73■□□□□ 0.43
PSMC4-201ENST00000157812 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
PSMC4-201ENST00000157812 TULP4Q9NRJ4 1543 aa17.73■□□□□ 0.43
PSMC4-201ENST00000157812 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
PSMC4-201ENST00000157812 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
PSMC4-201ENST00000157812 ADGRL3Q9HAR2 1447 aa17.7■□□□□ 0.42
PSMC4-201ENST00000157812 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
PSMC4-201ENST00000157812 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
PSMC4-201ENST00000157812 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
PSMC4-201ENST00000157812 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
PSMC4-201ENST00000157812 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
PSMC4-201ENST00000157812 RBM33Q96EV2 1170 aaKnown RBP17.69■□□□□ 0.42
PSMC4-201ENST00000157812 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
PSMC4-201ENST00000157812 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
PSMC4-201ENST00000157812 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
PSMC4-201ENST00000157812 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
PSMC4-201ENST00000157812 RGPD8O14715 1765 aaPredicted RBP17.68■□□□□ 0.42
PSMC4-201ENST00000157812 ITSN1Q15811 1721 aa17.68■□□□□ 0.42
PSMC4-201ENST00000157812 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSMC4-201ENST00000157812 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
PSMC4-201ENST00000157812 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
PSMC4-201ENST00000157812 MSH6P52701 1360 aa17.65■□□□□ 0.42
PSMC4-201ENST00000157812 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
PSMC4-201ENST00000157812 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
PSMC4-201ENST00000157812 RCAN3Q9UKA8 241 aa17.65■□□□□ 0.42
PSMC4-201ENST00000157812 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
PSMC4-201ENST00000157812 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
PSMC4-201ENST00000157812 DCCP43146 1447 aa17.63■□□□□ 0.41
PSMC4-201ENST00000157812 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
PSMC4-201ENST00000157812 ATF3P18847 181 aa17.62■□□□□ 0.41
PSMC4-201ENST00000157812 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
PSMC4-201ENST00000157812 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
PSMC4-201ENST00000157812 NSD2O96028 1365 aa17.6■□□□□ 0.41
PSMC4-201ENST00000157812 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
PSMC4-201ENST00000157812 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
PSMC4-201ENST00000157812 ATP7BP35670 1465 aa17.6■□□□□ 0.41
PSMC4-201ENST00000157812 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
PSMC4-201ENST00000157812 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
PSMC4-201ENST00000157812 B4GALNT3Q6L9W6 998 aa17.59■□□□□ 0.41
PSMC4-201ENST00000157812 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms