RNA–Protein interactions for RNA: ENSMUST00000176216.8

Cux1-207, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-207ENSMUST00000176216 Abca6Q8K441 1624 aa13.37□□□□□ -0.27
Cux1-207ENSMUST00000176216 Nphp4P59240 1425 aa13.37□□□□□ -0.27
Cux1-207ENSMUST00000176216 Myom1Q62234 1667 aaKnown RBP13.36□□□□□ -0.27
Cux1-207ENSMUST00000176216 Znf521Q6KAS7 1311 aa13.36□□□□□ -0.27
Cux1-207ENSMUST00000176216 Pnmal2G3X9N3 661 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Ppp1r3fQ9JIG4 799 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Nos1Q9Z0J4 1429 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Gprasp1Q5U4C1 1347 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Zmym3Q9JLM4 1370 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Lemd3Q9WU40 921 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Stag3O70576 1240 aa13.35□□□□□ -0.27
Cux1-207ENSMUST00000176216 Trim58Q5NCC9 485 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Zranb1Q7M760 708 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 KarsQ99MN1 595 aaKnown RBP13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 GsdmaQ9EST1 446 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Fndc1E9Q043 1732 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Rims1Q99NE5 1463 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Gm6268A2A3U9 297 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Iqgap3F8VQ29 1632 aa13.34□□□□□ -0.27
Cux1-207ENSMUST00000176216 Cdk5rap2Q8K389 1822 aa13.33□□□□□ -0.27
Cux1-207ENSMUST00000176216 Cep152A2AUM9 1736 aaKnown RBP13.33□□□□□ -0.27
Cux1-207ENSMUST00000176216 Stard8Q8K031 1019 aa13.33□□□□□ -0.28
Cux1-207ENSMUST00000176216 IbtkQ6ZPR6 1352 aaKnown RBP13.33□□□□□ -0.28
Cux1-207ENSMUST00000176216 Ecm2Q5FW85 670 aa13.33□□□□□ -0.28
Cux1-207ENSMUST00000176216 Ppp1r9bQ6R891 817 aaKnown RBP13.33□□□□□ -0.28
Cux1-207ENSMUST00000176216 Tmem131lQ3U3D7 1597 aa13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 Map4k4P97820 1233 aaKnown RBP13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 Ksr2Q3UVC0 959 aa13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 AU022751B1B0V2 589 aa13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 Rangap1P46061 589 aaKnown RBP13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 Talpid3E9PV87 1520 aa13.32□□□□□ -0.28
Cux1-207ENSMUST00000176216 Scaf11E9PZM7 1456 aaKnown RBP13.31□□□□□ -0.28
Cux1-207ENSMUST00000176216 Zfyve16Q80U44 1528 aa13.31□□□□□ -0.28
Cux1-207ENSMUST00000176216 Cald1E9QA15 768 aaKnown RBP13.31□□□□□ -0.28
Cux1-207ENSMUST00000176216 Abca8aQ8K442 1620 aa13.3□□□□□ -0.28
Cux1-207ENSMUST00000176216 U2af1Q9D883 239 aaKnown RBP13.3□□□□□ -0.28
Cux1-207ENSMUST00000176216 Abca9Q8K449 1623 aa13.3□□□□□ -0.28
Cux1-207ENSMUST00000176216 Cluap1Q8R3P7 413 aa13.3□□□□□ -0.28
Cux1-207ENSMUST00000176216 Znf518aB2RRF6 1478 aaKnown RBP13.29□□□□□ -0.28
Cux1-207ENSMUST00000176216 Ythdc2B2RR83 1445 aaKnown RBP13.29□□□□□ -0.28
Cux1-207ENSMUST00000176216 Myom2Q14BI5 1463 aa13.28□□□□□ -0.28
Cux1-207ENSMUST00000176216 Iqsec2Q5DU25 1478 aa13.28□□□□□ -0.28
Cux1-207ENSMUST00000176216 Igf1rQ60751 1373 aa13.28□□□□□ -0.28
Cux1-207ENSMUST00000176216 Tsen2Q6P7W5 460 aa13.28□□□□□ -0.28
Cux1-207ENSMUST00000176216 Pdlim2Q8R1G6 349 aa13.28□□□□□ -0.28
Cux1-207ENSMUST00000176216 Efcab6Q6P1E8 1516 aa13.27□□□□□ -0.28
Cux1-207ENSMUST00000176216 Prex1Q69ZK0 1650 aa13.27□□□□□ -0.28
Cux1-207ENSMUST00000176216 Adgrb3Q80ZF8 1522 aa13.27□□□□□ -0.29
Cux1-207ENSMUST00000176216 Stk26Q99JT2 416 aa13.26□□□□□ -0.29
Cux1-207ENSMUST00000176216 Ppp2r3aB2RXC8 1150 aa13.26□□□□□ -0.29
Cux1-207ENSMUST00000176216 DnmbpQ6TXD4 1580 aa13.25□□□□□ -0.29
Cux1-207ENSMUST00000176216 Tnpo1Q8BFY9 898 aaKnown RBP13.25□□□□□ -0.29
Cux1-207ENSMUST00000176216 Dusp27Q148W8 1138 aa13.25□□□□□ -0.29
Cux1-207ENSMUST00000176216 Tmc1Q8R4P5 757 aa13.25□□□□□ -0.29
Cux1-207ENSMUST00000176216 Spryd3E9Q9B3 442 aa13.24□□□□□ -0.29
Cux1-207ENSMUST00000176216 Znf330Q922H9 316 aa13.24□□□□□ -0.29
Cux1-207ENSMUST00000176216 PtprtQ99M80 1454 aa13.24□□□□□ -0.29
Cux1-207ENSMUST00000176216 Fam135bQ9DAI6 1403 aa13.23□□□□□ -0.29
Cux1-207ENSMUST00000176216 InsrP15208 1372 aa13.23□□□□□ -0.29
Cux1-207ENSMUST00000176216 Sptbn5F6UCX4 1208 aa13.23□□□□□ -0.29
Cux1-207ENSMUST00000176216 Ehbp1l1Q99MS7 1716 aa13.23□□□□□ -0.29
Cux1-207ENSMUST00000176216 AU019823E9PUQ3 292 aa13.22□□□□□ -0.29
Cux1-207ENSMUST00000176216 Amer1Q7TS75 1132 aa13.22□□□□□ -0.29
Cux1-207ENSMUST00000176216 Sipa1l1Q8C0T5 1782 aa13.22□□□□□ -0.29
Cux1-207ENSMUST00000176216 Uggt1Q6P5E4 1551 aa13.22□□□□□ -0.29
Cux1-207ENSMUST00000176216 KdrP35918 1367 aa13.22□□□□□ -0.29
Cux1-207ENSMUST00000176216 IqubQ8CDK3 788 aa13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Lrrc7Q80TE7 1490 aa13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 PalldQ9ET54 1408 aa13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Ccar1Q8CH18 1146 aaKnown RBP13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Exosc9Q9JHI7 438 aaKnown RBP13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Ptch1Q61115 1434 aa13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Trpm1Q2TV84 1622 aa13.21□□□□□ -0.29
Cux1-207ENSMUST00000176216 Mfap1aC0HKD8 439 aaKnown RBP13.2□□□□□ -0.3
Cux1-207ENSMUST00000176216 Mfap1bC0HKD9 439 aaKnown RBP13.2□□□□□ -0.3
Cux1-207ENSMUST00000176216 Nutm1Q8BHP2 1126 aa13.19□□□□□ -0.3
Cux1-207ENSMUST00000176216 Senp3Q9EP97 568 aaKnown RBP13.19□□□□□ -0.3
Cux1-207ENSMUST00000176216 Tbc1d32Q3URV1 1296 aa13.19□□□□□ -0.3
Cux1-207ENSMUST00000176216 Atp1b4Q99ME6 356 aa13.19□□□□□ -0.3
Cux1-207ENSMUST00000176216 CenpjQ569L8 1344 aa13.19□□□□□ -0.3
Cux1-207ENSMUST00000176216 Aplp1Q03157 653 aa13.18□□□□□ -0.3
Cux1-207ENSMUST00000176216 Topbp1Q6ZQF0 1515 aa13.18□□□□□ -0.3
Cux1-207ENSMUST00000176216 Gli2Q0VGT2 1544 aa13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 Skint5A7XUY5 1461 aa13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 Maco1Q7TQE6 664 aaKnown RBP13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 Rabep1O35551 862 aa13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 CastP51125 788 aa13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 Kif2cQ922S8 721 aa13.17□□□□□ -0.3
Cux1-207ENSMUST00000176216 Ccdc60Q8C4J0 545 aa13.16□□□□□ -0.3
Cux1-207ENSMUST00000176216 MaddQ80U28 1577 aa13.16□□□□□ -0.3
Cux1-207ENSMUST00000176216 OvosQ3UU35 1456 aa13.16□□□□□ -0.3
Cux1-207ENSMUST00000176216 Adgrl1Q80TR1 1466 aa13.16□□□□□ -0.3
Cux1-207ENSMUST00000176216 Catsper2A2ARP9 588 aa13.15□□□□□ -0.3
Cux1-207ENSMUST00000176216 Nectin2P32507 530 aa13.15□□□□□ -0.3
Cux1-207ENSMUST00000176216 Htatsf1Q8BGC0 757 aa13.15□□□□□ -0.3
Cux1-207ENSMUST00000176216 Antxr1Q9CZ52 562 aa13.15□□□□□ -0.3
Cux1-207ENSMUST00000176216 Kiaa0556Q8C753 1610 aa13.14□□□□□ -0.31
Cux1-207ENSMUST00000176216 Hfm1D3Z4R1 1434 aa13.14□□□□□ -0.31
Cux1-207ENSMUST00000176216 Atl3Q91YH5 541 aa13.14□□□□□ -0.31
Cux1-207ENSMUST00000176216 Phlpp2Q8BXA7 1320 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms