RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Pcmtd1P59913 357 aa15.15■□□□□ 0.02
Pcdh1-202ENSMUST00000159405 Fan1Q69ZT1 1020 aa15.15■□□□□ 0.02
Pcdh1-202ENSMUST00000159405 Nek4Q9Z1J2 792 aa15.15■□□□□ 0.02
Pcdh1-202ENSMUST00000159405 Mindy4Q3UQI9 744 aa15.14■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Rps6ka5Q8C050 863 aa15.14■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Nutm1Q8BHP2 1126 aa15.14■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Olfml1Q8BSH2 233 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 IqubQ8CDK3 788 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Kif2cQ922S8 721 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Grpel1Q99LP6 217 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Srcin1Q9QWI6 1250 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Abcc5Q9R1X5 1436 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Cdk13Q69ZA1 1511 aaKnown RBP15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 SynmQ70IV5 1561 aa15.13■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Jph4Q80WT0 628 aa15.12■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Grin2bQ01097 1482 aa15.12■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Zfp251Q6PCX8 632 aa15.12■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Zscan25B2RX31 543 aa15.12■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Ubap1lG3UW59 384 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 SkilQ60665 675 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Tmco5bQ80X59 307 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Atp2b3Q0VF55 1220 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Pnma3Q8JZW8 466 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Gm10093D3YYI8 482 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Hdac1O09106 482 aaKnown RBP15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 ImpactO55091 318 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 U2af2P26369 475 aaKnown RBP15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Kif4P33174 1231 aa15.11■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 AU019823E9PUQ3 292 aa15.1■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Ppp1r3fQ9JIG4 799 aa15.1■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Cul9Q80TT8 1865 aa15.1■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Zkscan1Q8BGS3 561 aaKnown RBP15.1■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Ccar1Q8CH18 1146 aaKnown RBP15.1■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Sox12Q04890 314 aa15.09■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Chd1lQ9CXF7 900 aa15.09■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Duox2A2AQ99 1517 aa15.09■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Lmo7E9PYF4 1699 aaKnown RBP15.09■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Urb2E9Q7L1 1524 aaKnown RBP15.08■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Mrvi1Q9WUX5 899 aaKnown RBP15.08■□□□□ 0.01
Pcdh1-202ENSMUST00000159405 Apaf1O88879 1249 aa15.08■□□□□ 0
Pcdh1-202ENSMUST00000159405 Atp2b2Q9R0K7 1198 aa15.08■□□□□ 0
Pcdh1-202ENSMUST00000159405 CadpsQ80TJ1 1355 aa15.08■□□□□ 0
Pcdh1-202ENSMUST00000159405 RalgapbQ8BQZ4 1484 aa15.08■□□□□ 0
Pcdh1-202ENSMUST00000159405 Abca5Q8K448 1642 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Rfx7F8VPJ6 1459 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Sh3bp1P55194 680 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Camsap1A2AHC3 1581 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Adam1bQ8R534 806 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Gm973E9Q295 1059 aa15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 U2af1Q9D883 239 aaKnown RBP15.07■□□□□ 0
Pcdh1-202ENSMUST00000159405 Sass6Q80UK7 654 aa15.06■□□□□ 0
Pcdh1-202ENSMUST00000159405 Rbm25B2RY56 838 aaKnown RBP15.06■□□□□ 0
Pcdh1-202ENSMUST00000159405 Gadd45bP22339 160 aa15.06■□□□□ 0
Pcdh1-202ENSMUST00000159405 Nol12Q8BG17 217 aa15.06■□□□□ 0
Pcdh1-202ENSMUST00000159405 Ptgs1P22437 602 aa15.05■□□□□ 0
Pcdh1-202ENSMUST00000159405 Rbm42Q91V81 474 aaKnown RBP15.05■□□□□ 0
Pcdh1-202ENSMUST00000159405 Map7d2A2AG50 781 aa15.05■□□□□ -0
Pcdh1-202ENSMUST00000159405 Gm9992B2RWK3 458 aa15.05■□□□□ -0
Pcdh1-202ENSMUST00000159405 Unc93aQ710D3 458 aa15.05■□□□□ -0
Pcdh1-202ENSMUST00000159405 Ccdc60Q8C4J0 545 aa15.05■□□□□ -0
Pcdh1-202ENSMUST00000159405 Utp3Q9JI13 469 aaKnown RBP15.05■□□□□ -0
Pcdh1-202ENSMUST00000159405 Tpd52l1O54818 204 aa15.04■□□□□ -0
Pcdh1-202ENSMUST00000159405 Uspl1Q3ULM6 1089 aa15.04■□□□□ -0
Pcdh1-202ENSMUST00000159405 Birc3O08863 600 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 1700010I14RikQ7TPG0 532 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Ercc6lQ8BHK9 1240 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 ScaperF8VQ70 1398 aaKnown RBP15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Setd1bQ8CFT2 1985 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Tbc1d9Q3UYK3 1264 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Gtf2e1Q9D0D5 440 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 PtmsQ9D0J8 101 aaKnown RBP15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 NexmifQ5DTT1 1515 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Bms1Q6PGF5 1284 aaKnown RBP15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 MlecQ6ZQI3 291 aaKnown RBP15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Frmd3Q8BHD4 595 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Polr3aB2RXC6 1390 aa15.03■□□□□ -0
Pcdh1-202ENSMUST00000159405 Kif21bQ9QXL1 1668 aa15.02■□□□□ -0
Pcdh1-202ENSMUST00000159405 Ccdc173A0JLY1 547 aa15.02■□□□□ -0
Pcdh1-202ENSMUST00000159405 Tomm22Q9CPQ3 142 aa15.02□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Gtpbp4Q99ME9 634 aaKnown RBP15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Maco1Q7TQE6 664 aaKnown RBP15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Peg3Q3URU2 1571 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 TnnQ80Z71 1560 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Anp32cQ64G17 123 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Kank4Q6P9J5 1016 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Fhod3Q76LL6 1578 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Tex14Q7M6U3 1450 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Wdr7Q920I9 1489 aa15.01□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Taf3Q5HZG4 932 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Txndc2Q6P902 515 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 GsdmaQ9EST1 446 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Cc2d2bA0A286YDU8 1405 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Map3k5O35099 1380 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Znf521Q6KAS7 1311 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Asxl1P59598 1514 aa15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Cald1E9QA15 768 aaKnown RBP15□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Hvcn1Q3U2S8 269 aa14.99□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 Kdm4aQ8BW72 1064 aa14.99□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 KdrP35918 1367 aa14.99□□□□□ -0.01
Pcdh1-202ENSMUST00000159405 RdxP26043 583 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 84.8 ms