RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Inpp5dQ9ES52 1191 aa14.03□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 Trpm1Q2TV84 1622 aa14.03□□□□□ -0.16
Prpf40b-202ENSMUST00000118287 PrxO55103 1391 aa14.02□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Iqgap3F8VQ29 1632 aa14.02□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 ErbinQ80TH2 1402 aa14.01□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Kcna4Q61423 654 aa14.01□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Ppip5k1A2ARP1 1436 aa14.01□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Kdm2aP59997 1161 aa14.01□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Setd1aE9PYH6 1716 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Adamts13Q769J6 1426 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Chmp5Q9D7S9 219 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Abcc6Q9R1S7 1498 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Tubgcp6G5E8P0 1769 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Nkx1-2P42580 305 aa14□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Zfp91Q62511 572 aa13.99□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Kiaa1211Q5PR69 1207 aa13.99□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 BbxQ8VBW5 907 aa13.99□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Tulp4Q9JIL5 1547 aa13.98□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Zscan10Q3URR7 782 aa13.98□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Mink1Q9JM52 1308 aa13.98□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Dnai1Q8C0M8 701 aa13.98□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Gtf3c6Q9D8P7 227 aa13.98□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Tmf1B9EKI3 1091 aa13.97□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Os9Q8K2C7 672 aa13.96□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 AatkQ80YE4 1365 aa13.96□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Zmym4A2A791 1549 aaKnown RBP13.96□□□□□ -0.17
Prpf40b-202ENSMUST00000118287 Neurod2Q62414 383 aa13.96□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 EspnQ9ET47 871 aa13.96□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 CltcQ68FD5 1675 aaKnown RBP13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Trim30dE9PWL0 497 aa13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Rwdd1Q9CQK7 243 aa13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 NudcO35685 332 aaKnown RBP13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Prdm10Q3UTQ7 1184 aa13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Stard8Q8K031 1019 aa13.95□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Prdm2A2A7B5 1709 aaKnown RBP13.94□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Talpid3E9PV87 1520 aa13.94□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Knl1Q66JQ7 1612 aa13.94□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Abca8aQ8K442 1620 aa13.94□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Akap12Q9WTQ5 1684 aa13.94□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Srcin1Q9QWI6 1250 aa13.93□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Arid4bA2CG63 1314 aaKnown RBP13.93□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Adgrb3Q80ZF8 1522 aa13.92□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Kif16bB1AVY7 1312 aa13.92□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Safb2Q80YR5 991 aaKnown RBP13.92□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Eif2s2Q99L45 331 aaKnown RBP13.92□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Ino80Q6ZPV2 1559 aa13.91□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Hfm1D3Z4R1 1434 aa13.91□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Ehbp1l1Q99MS7 1716 aa13.91□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Adamts7Q68SA9 1657 aa13.9□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Ppp2r1aQ76MZ3 589 aa13.9□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 4933402E13RikQ9D4D2 429 aa13.9□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Tex14Q7M6U3 1450 aa13.9□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Fan1Q69ZT1 1020 aa13.9□□□□□ -0.18
Prpf40b-202ENSMUST00000118287 Skint5A7XUY5 1461 aa13.9□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Sox12Q04890 314 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Speer4f1Q9D5Q6 258 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 TnikP83510 1323 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Gm20521D3Z5F7 333 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Fam184bQ0KK56 942 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Ppm1gQ61074 542 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Adamtsl3G3UXC7 1706 aa13.89□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 AU022751B1B0V2 589 aa13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Mbd3Q9Z2D8 285 aaKnown RBP13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Sbno1Q689Z5 1390 aa13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Mre11Q61216 706 aa13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Dcaf11Q91VU6 549 aa13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Arid4aF8VPQ2 1261 aaKnown RBP13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Hsp90ab1P11499 724 aaKnown RBP13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Tecpr2Q3UH45 1423 aa13.88□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Myom2Q14BI5 1463 aa13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Efcab6Q6P1E8 1516 aa13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Srpk2O54781 681 aaKnown RBP13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Pdcl3Q8BVF2 240 aa13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Myo3aQ8K3H5 1613 aa13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Kdm2bQ6P1G2 1309 aa13.87□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Fam43aQ8BUP8 424 aa13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Atp1b4Q99ME6 356 aa13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Ahdc1Q6PAL7 1594 aaKnown RBP13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Spryd3E9Q9B3 442 aa13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Igsf3Q6ZQA6 1194 aa13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Ak7Q9D2H2 614 aa13.86□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Arhgap23Q69ZH9 1483 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Ercc6l2Q9JIM3 1537 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Rab3gap2Q8BMG7 1366 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 RictorQ6QI06 1708 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Tspyl2Q7TQI8 677 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Gm16486A0A1D5RMD1 1434 aa13.85□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Nlrp6Q91WS2 869 aa13.84□□□□□ -0.19
Prpf40b-202ENSMUST00000118287 Prrc2bQ7TPM1 1486 aaKnown RBP13.83□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Rims1Q99NE5 1463 aa13.83□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Mroh1E0CZ22 1640 aa13.83□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Ttc41Q692V3 1318 aa13.83□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Ppp6r1Q7TSI3 856 aa13.82□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Plcd3Q8K2J0 785 aa13.82□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Kif13aQ9EQW7 1749 aa13.82□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Gm6268A2A3U9 297 aa13.82□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Ipo8Q7TMY7 1010 aa13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Smc5Q8CG46 1101 aaKnown RBP13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Polr3glQ8R0C0 218 aa13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 PtprmP28828 1452 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms