RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Slc13a4Q8BZ82 625 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Ifit1bl1D3Z6F0 470 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Eif3j1Q3UGC7 261 aaKnown RBP21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Eif3j2Q66JS6 263 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Tex35Q14BK3 207 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Paxip1Q6NZQ4 1056 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Mad1l1Q9WTX8 717 aaKnown RBP21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Mipol1Q9D9F8 279 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Phactr2B1AVP0 632 aa21.8■■□□□ 1.08
Trim71-201ENSMUST00000111816 Syap1Q9D5V6 365 aa21.79■■□□□ 1.08
Trim71-201ENSMUST00000111816 Ccdc112A0AUP1 442 aa21.78■■□□□ 1.08
Trim71-201ENSMUST00000111816 Map2k1P31938 393 aa21.78■■□□□ 1.08
Trim71-201ENSMUST00000111816 SltmQ8CH25 1031 aaKnown RBP21.78■■□□□ 1.08
Trim71-201ENSMUST00000111816 Cfap57Q9D180 1249 aa21.78■■□□□ 1.08
Trim71-201ENSMUST00000111816 Dnaaf4Q8R368 420 aa21.77■■□□□ 1.08
Trim71-201ENSMUST00000111816 Erlin1Q91X78 346 aa21.77■■□□□ 1.08
Trim71-201ENSMUST00000111816 Ubap1lG3UW59 384 aa21.77■■□□□ 1.08
Trim71-201ENSMUST00000111816 Nap1l2P51860 460 aa21.77■■□□□ 1.08
Trim71-201ENSMUST00000111816 Fam184aE9PW83 1143 aa21.77■■□□□ 1.07
Trim71-201ENSMUST00000111816 Me1P06801 572 aa21.77■■□□□ 1.07
Trim71-201ENSMUST00000111816 Ift57Q8BXG3 429 aa21.76■■□□□ 1.07
Trim71-201ENSMUST00000111816 Eif2s2Q99L45 331 aaKnown RBP21.76■■□□□ 1.07
Trim71-201ENSMUST00000111816 Ercc6lQ8BHK9 1240 aa21.76■■□□□ 1.07
Trim71-201ENSMUST00000111816 Rsf1E9PWW9 1441 aaKnown RBP21.76■■□□□ 1.07
Trim71-201ENSMUST00000111816 Cdr1E9Q0B4 517 aa21.75■■□□□ 1.07
Trim71-201ENSMUST00000111816 CenphQ9QYM8 241 aa21.75■■□□□ 1.07
Trim71-201ENSMUST00000111816 Pibf1E9Q6K3 756 aa21.75■■□□□ 1.07
Trim71-201ENSMUST00000111816 Gigyf2Q6Y7W8 1291 aaKnown RBP21.75■■□□□ 1.07
Trim71-201ENSMUST00000111816 Cfap58B2RW38 873 aa21.74■■□□□ 1.07
Trim71-201ENSMUST00000111816 Cetn4Q8K4K1 168 aa21.74■■□□□ 1.07
Trim71-201ENSMUST00000111816 Stk26Q99JT2 416 aa21.74■■□□□ 1.07
Trim71-201ENSMUST00000111816 Cpsf2O35218 782 aaKnown RBP21.74■■□□□ 1.07
Trim71-201ENSMUST00000111816 Arhgap35Q91YM2 1499 aa21.74■■□□□ 1.07
Trim71-201ENSMUST00000111816 Dnajc2P54103 621 aaKnown RBP21.73■■□□□ 1.07
Trim71-201ENSMUST00000111816 Pdia4P08003 638 aaKnown RBP21.73■■□□□ 1.07
Trim71-201ENSMUST00000111816 Cfap53Q9D439 514 aa21.73■■□□□ 1.07
Trim71-201ENSMUST00000111816 Arhgap27A2AB59 869 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Atl3Q91YH5 541 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Pdcl2Q78Y63 240 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Gm18336A0A140LIU8 765 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Gm44503E9PYU5 387 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Mterf4Q8BVN4 346 aa21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Rnf214Q8BFU3 668 aaKnown RBP21.72■■□□□ 1.07
Trim71-201ENSMUST00000111816 Smc1bQ920F6 1248 aa21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Stk31Q99MW1 1018 aa21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Clul1Q3ZRW6 464 aa21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Plekhd1B2RPU2 505 aa21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Hspa5P20029 655 aaKnown RBP21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Rock1P70335 1354 aa21.71■■□□□ 1.07
Trim71-201ENSMUST00000111816 Pkd2O35245 966 aa21.7■■□□□ 1.07
Trim71-201ENSMUST00000111816 Exoc8Q6PGF7 716 aa21.7■■□□□ 1.07
Trim71-201ENSMUST00000111816 Shtn1Q8K2Q9 631 aa21.7■■□□□ 1.06
Trim71-201ENSMUST00000111816 Smg6P61406 1418 aaKnown RBP21.7■■□□□ 1.06
Trim71-201ENSMUST00000111816 Usp48Q3V0C5 1052 aa21.7■■□□□ 1.06
Trim71-201ENSMUST00000111816 Skor1Q8BX46 964 aa21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Abcd1P48410 736 aa21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Ints3Q7TPD0 1041 aaKnown RBP21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 AnlnQ8K298 1121 aaKnown RBP21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Smc1aQ9CU62 1233 aaKnown RBP21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Psme1P97371 249 aa21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Fnbp4Q6ZQ03 1031 aa21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Ccdc60Q8C4J0 545 aa21.69■■□□□ 1.06
Trim71-201ENSMUST00000111816 Gtf2f1Q3THK3 508 aaKnown RBP21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Suds3Q8BR65 328 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Als2cr12Q8BVM7 383 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Tmem132aQ922P8 1018 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Bbof1Q3V079 533 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 NmiO35309 314 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Larp1Q6ZQ58 1072 aaKnown RBP21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 Ap3b2Q9JME5 1082 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 CenpjQ569L8 1344 aa21.68■■□□□ 1.06
Trim71-201ENSMUST00000111816 ZfxP17012 799 aa21.67■■□□□ 1.06
Trim71-201ENSMUST00000111816 IqcgQ80W32 419 aa21.67■■□□□ 1.06
Trim71-201ENSMUST00000111816 Erc1Q99MI1 1120 aa21.67■■□□□ 1.06
Trim71-201ENSMUST00000111816 Map4P27546 1125 aaKnown RBP21.66■■□□□ 1.06
Trim71-201ENSMUST00000111816 Cbx1P83917 185 aaKnown RBP21.66■■□□□ 1.06
Trim71-201ENSMUST00000111816 Fmnl2A2APV2 1086 aa21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 Ssr1Q9CY50 286 aaKnown RBP21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 PogkQ80TC5 607 aa21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 Cetn2Q9R1K9 172 aa21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 Znf704Q9ERQ3 566 aa21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 NexnQ7TPW1 607 aa21.65■■□□□ 1.06
Trim71-201ENSMUST00000111816 Tubb6Q922F4 447 aa21.64■■□□□ 1.06
Trim71-201ENSMUST00000111816 Med4Q9CQA5 270 aa21.64■■□□□ 1.06
Trim71-201ENSMUST00000111816 Srcin1Q9QWI6 1250 aa21.64■■□□□ 1.06
Trim71-201ENSMUST00000111816 Ciz1Q8VEH2 845 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Tspyl3Q3UYP3 334 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Ankrd24Q80VM7 985 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Apol7cQ8C6E1 369 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Sept7O55131 436 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Abcc8B2RUS7 1588 aa21.64■■□□□ 1.05
Trim71-201ENSMUST00000111816 Sept14Q9DA97 430 aa21.63■■□□□ 1.05
Trim71-201ENSMUST00000111816 Golga3P55937 1487 aa21.63■■□□□ 1.05
Trim71-201ENSMUST00000111816 Ercc6F8VPZ5 1481 aa21.63■■□□□ 1.05
Trim71-201ENSMUST00000111816 Rsph10bE9PYQ0 876 aa21.63■■□□□ 1.05
Trim71-201ENSMUST00000111816 Nol7Q9D7Z3 254 aaKnown RBP21.63■■□□□ 1.05
Trim71-201ENSMUST00000111816 Trim58Q5NCC9 485 aa21.62■■□□□ 1.05
Trim71-201ENSMUST00000111816 Tsen2Q6P7W5 460 aa21.62■■□□□ 1.05
Trim71-201ENSMUST00000111816 G3bp1P97855 465 aaKnown RBP21.61■■□□□ 1.05
Trim71-201ENSMUST00000111816 Kif3bQ61771 747 aa21.6■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms