RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Grpel1Q99LP6 217 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Tarbp1E9Q368 1579 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Gm9992B2RWK3 458 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Rbm25B2RY56 838 aaKnown RBP9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Ralbp1Q62172 648 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Unc93aQ710D3 458 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Nup155Q99P88 1391 aaKnown RBP9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Kdm6bQ5NCY0 1641 aa9.43□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Syce3B5KM66 88 aa9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Gpatch8A2A6A1 1505 aa9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Ifit1bl1D3Z6F0 470 aa9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Atf7ipQ7TT18 1306 aa9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Atad2bE9Q166 1460 aaKnown RBP9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Kdm3bQ6ZPY7 1562 aa9.42□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Casq1O09165 405 aa9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Map4P27546 1125 aaKnown RBP9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Bms1Q6PGF5 1284 aaKnown RBP9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 ScaperF8VQ70 1398 aaKnown RBP9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Rbm42Q91V81 474 aaKnown RBP9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Polr1aO35134 1717 aaKnown RBP9.41□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Samd9lQ69Z37 1561 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Arhgap31A6X8Z5 1425 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Igf1rQ60751 1373 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Kif7B7ZNG0 1348 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 ImpactO55091 318 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Kcnj4P52189 445 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Fam184bQ0KK56 942 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Uspl1Q3ULM6 1089 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Zfp251Q6PCX8 632 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Cavin1O54724 392 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 U2af2P26369 475 aaKnown RBP9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Ksr2Q3UVC0 959 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Npm1Q61937 292 aaKnown RBP9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Znf330Q922H9 316 aa9.4□□□□□ -0.9
Bdnf-209ENSMUST00000111050 Unc13aQ4KUS2 1712 aa9.4□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ptgs1P22437 602 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Kif3aP28741 701 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Gpatch11Q3UFS4 262 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Il16O54824 1322 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ercc6lQ8BHK9 1240 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Znf326O88291 580 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ncbp1Q3UYV9 790 aaKnown RBP9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Q4VA45 678 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Rad54l2Q99NG0 1466 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Sh3bp1P55194 680 aa9.39□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Chd1lQ9CXF7 900 aa9.38□□□□□ -0.91
Bdnf-209ENSMUST00000111050 KnstrnQ9D9Z1 312 aaKnown RBP9.38□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Fam135bQ9DAI6 1403 aa9.38□□□□□ -0.91
Bdnf-209ENSMUST00000111050 FanciQ8K368 1330 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Anp32cQ64G17 123 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Fkbp15Q6P9Q6 1216 aaKnown RBP9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Kiaa0754Q69ZZ9 979 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 E4f1Q8CCE9 783 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Kdm4cQ8VCD7 1054 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Duox2A2AQ99 1517 aa9.37□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Setd1aE9PYH6 1716 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 AcrbpQ3V140 540 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Mkrn3Q60764 544 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Inpp5bQ8K337 993 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Gm16486A0A1D5RMD1 1434 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ccdc146E9Q9F7 977 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Gadd45bP22339 160 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 SkilQ60665 675 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Olfml1Q8BSH2 233 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Kdm4aQ8BW72 1064 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Nek4Q9Z1J2 792 aa9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Iqgap1Q9JKF1 1657 aaKnown RBP9.36□□□□□ -0.91
Bdnf-209ENSMUST00000111050 DroshaQ5HZJ0 1373 aaKnown RBP9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Tbc1d9Q3UYK3 1264 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Prdm4Q80V63 803 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Gripap1Q8VD04 806 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 KdrP35918 1367 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ncapd2Q8K2Z4 1392 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Rrbp1Q99PL5 1605 aaKnown RBP9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Nfatc2ipO09130 412 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Ncoa3O09000 1398 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Kiaa1107Q80TK0 1369 aa9.35□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Brd1E9PZ26 1189 aaKnown RBP9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Cald1E9QA15 768 aaKnown RBP9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Zkscan1Q8BGS3 561 aaKnown RBP9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Bach2P97303 839 aa9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Gtpbp4Q99ME9 634 aaKnown RBP9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Dot1lQ6XZL8 1540 aa9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Nxf2Q4ZGD8 691 aa9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Nutm1Q8BHP2 1126 aa9.34□□□□□ -0.91
Bdnf-209ENSMUST00000111050 Trim30aP15533 496 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Sass6Q80UK7 654 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Atp2b2Q9R0K7 1198 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Kdm2aP59997 1161 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Zmynd15Q8C0R7 736 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Srcin1Q9QWI6 1250 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Tbc1d31Q6NXY1 996 aa9.33□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Kif4P33174 1231 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Maco1Q7TQE6 664 aaKnown RBP9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Gdpd2Q9ESM6 539 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Samd1D3YXK1 519 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Wdr62Q3U3T8 1523 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Myom2Q14BI5 1463 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 Apaf1O88879 1249 aa9.32□□□□□ -0.92
Bdnf-209ENSMUST00000111050 1700010I14RikQ7TPG0 532 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms