RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Rnf20Q5DTM8 973 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Znf526Q8BI66 675 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Q7TT23 1179 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Anapc15-psA0A140T8L6 141 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 TnmdQ9EP64 317 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Kri1Q8VDQ9 704 aaKnown RBP9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Stk3Q9JI10 497 aa9.66□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Otud6bQ8K2H2 294 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ccar2Q8VDP4 922 aaKnown RBP9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Tmco3Q8BH01 678 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Cyp46a1Q9WVK8 500 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Samm50Q8BGH2 469 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 ItpripQ3TNL8 555 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Spag5Q7TME2 1165 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 AppP12023 770 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ccdc102aQ3TMW1 549 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Ncbp3Q8BZR9 615 aaKnown RBP9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Vps53Q8CCB4 832 aa9.65□□□□□ -0.86
Scn8a-204ENSMUST00000108909 Chaf1aQ9QWF0 911 aa9.65□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Ints3Q7TPD0 1041 aaKnown RBP9.65□□□□□ -0.87
Scn8a-204ENSMUST00000108909 A0A1L1SQF0 893 aa9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 HmmrQ00547 794 aaKnown RBP9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Dctn1O08788 1281 aa9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Nap1l1P28656 391 aaKnown RBP9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 L3mbtl2P59178 703 aa9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Trim25Q61510 634 aaKnown RBP9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Kif18aQ91WD7 886 aa9.64□□□□□ -0.87
Scn8a-204ENSMUST00000108909 SelenooQ9DBC0 667 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Vps8Q0P5W1 1427 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 NefhP19246 1090 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Mcm4P49717 862 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Usp16Q99LG0 825 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cfap65Q3V0B4 1847 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cplx2P84086 134 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Noc3lQ8VI84 807 aaKnown RBP9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cux2P70298 1426 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Hdgfl1Q2VPR5 283 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Kif3cO35066 796 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Evc2Q8K1G2 1220 aa9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 AnlnQ8K298 1121 aaKnown RBP9.63□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Bag1Q60739 355 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Neurod6P48986 337 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cnnm3Q32NY4 713 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Tfip11Q9ERA6 838 aaKnown RBP9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Carmil1Q6EDY6 1374 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Utp14aQ640M1 767 aaKnown RBP9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Fnbp4Q6ZQ03 1031 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Paf1Q8K2T8 535 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Plcd3Q8K2J0 785 aa9.62□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Mctp1E9PV86 951 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 OptnQ8K3K8 584 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cfap99A0A140LIX9 648 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Kcnj4P52189 445 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Ppp2r1aQ76MZ3 589 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Rbm25B2RY56 838 aaKnown RBP9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Rcan3Q9JKK0 239 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Gm42641I6L9G2 585 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 AtripQ8BMG1 785 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 PhaxQ9JJT9 385 aaKnown RBP9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Pmfbp1Q9WVQ0 1022 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Erc2Q6PH08 957 aa9.61□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Fam184aE9PW83 1143 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Gtf2f1Q3THK3 508 aaKnown RBP9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Tspyl2Q7TQI8 677 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Odf2A3KGV1 830 aaKnown RBP9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Rnf187Q8BFX1 236 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Gse1Q3U3C9 1213 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Nup88Q8CEC0 753 aaKnown RBP9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cchcr1Q8K2I2 770 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 MicalclQ9D5U9 680 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Cpa2Q504N0 417 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Usp40Q8BWR4 1235 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Med4Q9CQA5 270 aa9.6□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Mink1Q9JM52 1308 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Mcm2P97310 904 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Ccdc83Q9D4V3 305 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Mex3cQ05A36 652 aaKnown RBP9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 CftrP26361 1476 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 NexnQ7TPW1 607 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Myh10Q61879 1976 aaKnown RBP9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Ccdc181Q80ZU5 509 aa9.59□□□□□ -0.87
Scn8a-204ENSMUST00000108909 Dhx29Q6PGC1 1365 aaKnown RBP9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Liat1Q810M6 228 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Stk38Q91VJ4 465 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 ImpactO55091 318 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Slu7Q8BHJ9 585 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Gnl2Q99LH1 728 aaKnown RBP9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Sycp1Q62209 993 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Secisbp2lQ6A098 1086 aaKnown RBP9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Atp2b2Q9R0K7 1198 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Kif3bQ61771 747 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Necab1Q8BG18 352 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Hvcn1Q3U2S8 269 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Sass6Q80UK7 654 aa9.58□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Arid3cA6PWV5 409 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Serpina10Q8R121 448 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Jakmip1Q8BVL9 626 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Psme1P97371 249 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Ccdc171E9Q1U1 1324 aa9.57□□□□□ -0.88
Scn8a-204ENSMUST00000108909 Cecr2E9Q2Z1 1453 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms