RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Cpsf1Q9EPU4 1441 aaKnown RBP14.42□□□□□ -0.1
Ssh1-201ENSMUST00000077689 MsnP26041 577 aaKnown RBP14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Kdm2aP59997 1161 aa14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Gzf1Q4VBD9 706 aa14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Smc5Q8CG46 1101 aaKnown RBP14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Asxl1P59598 1514 aa14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Dot1lQ6XZL8 1540 aa14.41□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Gm32742A0A1B0GT42 1604 aa14.4□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Cald1E9QA15 768 aaKnown RBP14.4□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Isy1Q69ZQ2 285 aaKnown RBP14.4□□□□□ -0.1
Ssh1-201ENSMUST00000077689 Cfap74Q3UY96 1578 aa14.39□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Kcnj4P52189 445 aa14.39□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Rnf17Q99MV7 1640 aa14.39□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Dcaf11Q91VU6 549 aa14.39□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Pdcl2Q78Y63 240 aa14.38□□□□□ -0.11
Ssh1-201ENSMUST00000077689 AI481877A2ALV5 1481 aa14.38□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Bms1Q6PGF5 1284 aaKnown RBP14.38□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Tmc1Q8R4P5 757 aa14.38□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Kif3bQ61771 747 aa14.38□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Plin1Q8CGN5 517 aa14.37□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Mapk8ip3Q9ESN9 1337 aa14.37□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Catsper2A2ARP9 588 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Ercc6lQ8BHK9 1240 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Q8BT18 775 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 FanciQ8K368 1330 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Pank2Q3U4S0 443 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Mak16Q8BGS0 296 aaKnown RBP14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Pank3Q8R2W9 370 aa14.36□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Znf608Q56A10 1511 aa14.35□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Atp2b3Q0VF55 1220 aa14.35□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Rpgrip1lQ8CG73 1264 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Lemd3Q9WU40 921 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Igf1rQ60751 1373 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Mast1Q9R1L5 1570 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 NhsB1AV60 1647 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Tarbp1E9Q368 1579 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Prdm4Q80V63 803 aa14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Mrvi1Q9WUX5 899 aaKnown RBP14.34□□□□□ -0.11
Ssh1-201ENSMUST00000077689 Nsd2Q8BVE8 1365 aa14.33□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Ythdc2B2RR83 1445 aaKnown RBP14.33□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Kank4Q6P9J5 1016 aa14.33□□□□□ -0.12
Ssh1-201ENSMUST00000077689 PtmaP26350 111 aa14.32□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Stk24Q99KH8 431 aa14.32□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Rabep1O35551 862 aa14.32□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Fez1Q8K0X8 392 aa14.32□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Inpp5dQ9ES52 1191 aa14.32□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Mkrn3Q60764 544 aa14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Rps6ka5Q8C050 863 aa14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Abcc3B2RX12 1523 aa14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Sall3Q62255 1320 aa14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 KarsQ99MN1 595 aaKnown RBP14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Rwdd1Q9CQK7 243 aa14.31□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Arhgap4B1AUY3 965 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Wdr78E9PYY5 807 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Sh3bp1P55194 680 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Zscan21Q07231 555 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Pnma3Q8JZW8 466 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Srcin1Q9QWI6 1250 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Gtpbp4Q99ME9 634 aaKnown RBP14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Chd1P40201 1711 aa14.3□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Gm20521D3Z5F7 333 aa14.29□□□□□ -0.12
Ssh1-201ENSMUST00000077689 NcapgE9PWG6 1004 aa14.29□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Neurl4Q5NCX5 1563 aa14.29□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Iqgap1Q9JKF1 1657 aaKnown RBP14.29□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Cdc42bpbQ7TT50 1713 aa14.28□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Edc4Q3UJB9 1406 aaKnown RBP14.28□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Abca8bQ8K440 1620 aa14.28□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Tmf1B9EKI3 1091 aa14.28□□□□□ -0.12
Ssh1-201ENSMUST00000077689 PrxO55103 1391 aa14.27□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Ppip5k1A2ARP1 1436 aa14.27□□□□□ -0.12
Ssh1-201ENSMUST00000077689 Kiaa1210E9Q0C6 1637 aa14.27□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Slc4a1apE9PX68 744 aa14.27□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Pdcd11Q6NS46 1862 aaKnown RBP14.27□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Hecw1Q8K4P8 1604 aa14.26□□□□□ -0.13
Ssh1-201ENSMUST00000077689 1700017N19RikA0A087WPJ1 469 aa14.26□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Zmynd15Q8C0R7 736 aa14.26□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Zscan10Q3URR7 782 aa14.26□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Terf2O35144 541 aa14.25□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Usp54Q8BL06 1588 aaKnown RBP14.25□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Srpk2O54781 681 aaKnown RBP14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Rfx1P48377 963 aa14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 MycnP03966 462 aaKnown RBP14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Ddit3P35639 168 aa14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Prdm10Q3UTQ7 1184 aa14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 IqubQ8CDK3 788 aa14.24□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Erich4Q3UNU4 136 aa14.23□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Grpel1Q99LP6 217 aa14.23□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Mfap1aC0HKD8 439 aaKnown RBP14.23□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Mfap1bC0HKD9 439 aaKnown RBP14.23□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Chrm1P12657 460 aa14.22□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Ylpm1Q9R0I7 1386 aaKnown RBP14.22□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Fan1Q69ZT1 1020 aa14.22□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Tspyl2Q7TQI8 677 aa14.22□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Ttc21bQ0HA38 1315 aa14.22□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Adamts13Q769J6 1426 aa14.21□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Cep170Q6A065 1588 aa14.21□□□□□ -0.13
Ssh1-201ENSMUST00000077689 U2af2P26369 475 aaKnown RBP14.21□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Zfp251Q6PCX8 632 aa14.21□□□□□ -0.13
Ssh1-201ENSMUST00000077689 ErbinQ80TH2 1402 aa14.21□□□□□ -0.13
Ssh1-201ENSMUST00000077689 Kif1bQ60575 1816 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms