RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Plcg2Q8CIH5 1265 aa12.81□□□□□ -0.36
Ccdc54-201ENSMUST00000062439 Mmp16Q9WTR0 607 aa12.8□□□□□ -0.36
Ccdc54-201ENSMUST00000062439 Myt1lP97500 1187 aa12.79□□□□□ -0.36
Ccdc54-201ENSMUST00000062439 SowahcQ8C0J6 512 aa12.79□□□□□ -0.36
Ccdc54-201ENSMUST00000062439 Gm10563F6WIE4 79 aa12.78□□□□□ -0.36
Ccdc54-201ENSMUST00000062439 Cul4bA2A432 970 aaKnown RBP12.77□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Ccr5P51682 354 aa12.77□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Brd2Q7JJ13 798 aaKnown RBP12.77□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Rint1Q8BZ36 792 aa12.77□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Map3k14Q9WUL6 942 aa12.76□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Tmub1Q9JMG3 245 aa12.74□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Setdb1O88974 1307 aa12.73□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Gm17324Q8C6J8 137 aa12.73□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 SnrkQ8VDU5 748 aa12.73□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 SpidrQ8BGX7 933 aa12.71□□□□□ -0.37
Ccdc54-201ENSMUST00000062439 Pacs2Q3V3Q7 862 aa12.7□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Q8C6G1 249 aa12.7□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Hmx2P43687 273 aa12.69□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Washc4Q3UMB9 1173 aa12.69□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Adgrf1Q8VEC3 908 aa12.69□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Phf12Q5SPL2 1003 aa12.67□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Eva1bQ8K2Y3 164 aa12.67□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 AdarQ99MU3 1178 aaKnown RBP12.67□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Ube3bQ9ES34 1070 aa12.67□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 TraipQ8VIG6 470 aa12.66□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Chmp3Q9CQ10 224 aa12.66□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Rasa1E9PYG6 1038 aa12.65□□□□□ -0.38
Ccdc54-201ENSMUST00000062439 Fhdc1Q3ULZ2 1149 aa12.64□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Eif4g2Q62448 906 aaKnown RBP12.64□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Pcdhb22Q91XZ8 794 aa12.64□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Cfap70D3YVL2 1141 aa12.63□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Hoxb3P09026 433 aa12.63□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Rnf166Q3U9F6 237 aa12.63□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Scube2Q9JJS0 997 aa12.63□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 PtgdrP70263 357 aa12.62□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Plcd3Q8K2J0 785 aa12.62□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Fcf1Q9CTH6 198 aa12.62□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Ppp1r3fQ9JIG4 799 aa12.62□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Emp3O35912 163 aa12.61□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Bms1Q6PGF5 1284 aaKnown RBP12.61□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Klhl34A2AI76 644 aa12.6□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Hoxb4P10284 250 aa12.6□□□□□ -0.39
Ccdc54-201ENSMUST00000062439 Tbc1d2bQ3U0J8 965 aa12.58□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Prpf40aQ9R1C7 953 aaKnown RBP12.58□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Ncbp3Q8BZR9 615 aaKnown RBP12.57□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Sec1P97353 368 aa12.56□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Tmem52Q9D702 196 aa12.55□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Prss12O08762 761 aa12.54□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Spire2Q8K1S6 718 aa12.54□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Kdm2bQ6P1G2 1309 aa12.54□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 MafbP54841 323 aa12.53□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Fbxo45Q8K3B1 286 aa12.53□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 F11Q91Y47 624 aa12.53□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Lgr5Q9Z1P4 907 aa12.53□□□□□ -0.4
Ccdc54-201ENSMUST00000062439 Il13ra1O09030 424 aa12.52□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Pou3f3P31361 497 aa12.52□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 SympkQ80X82 1284 aa12.52□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Znf467Q8JZL0 594 aa12.52□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 A0A1L1SQF0 893 aa12.51□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 FechP22315 420 aaKnown RBP12.51□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Fhod1Q6P9Q4 1197 aa12.51□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Fgd1P52734 960 aa12.5□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Spink5Q148R4 1017 aa12.5□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Cyp7a1Q64505 503 aa12.5□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Hps4Q99KG7 671 aa12.5□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Spata31d1aE9QA35 1336 aa12.5□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Apex1P28352 317 aaKnown RBP12.49□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Usp48Q3V0C5 1052 aa12.49□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Rc3h1Q4VGL6 1130 aaKnown RBP12.49□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Zfp617Q91WM0 559 aa12.49□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Znf511Q6P0X2 227 aa12.48□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Znf428Q8C1M2 176 aa12.47□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Sp7Q8VI67 428 aa12.47□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Cts7Q91ZF2 331 aa12.47□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Ms4a4bQ9ES61 226 aa12.47□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Supt5hO55201 1082 aaKnown RBP12.46□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Hsd3b3P26150 373 aa12.46□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Wfs1P56695 890 aa12.46□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Vars2Q3U2A8 1060 aa12.46□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Pcdhb7Q8CDY9 829 aa12.46□□□□□ -0.41
Ccdc54-201ENSMUST00000062439 Sema3fO88632 785 aa12.45□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Man1a2P39098 641 aa12.45□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Plcd4Q8K3R3 807 aa12.45□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Tmem134Q8R0J4 195 aa12.45□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Duxf3A0A0N4SV92 674 aa12.44□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Fam212aQ9CX62 282 aa12.44□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Pcdhgc3Q91XX1 934 aa12.42□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Mxra7Q9CZH7 178 aa12.42□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Fzd6Q61089 709 aa12.41□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Mrgprb8Q7TN51 330 aa12.41□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Map10Q8BJS7 891 aa12.41□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Emilin2Q8K482 1074 aa12.41□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Nek10Q3UGM2 1111 aa12.4□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Ufsp1Q9CZP0 217 aa12.4□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Chic2Q9D9G3 165 aa12.4□□□□□ -0.42
Ccdc54-201ENSMUST00000062439 Sik2Q8CFH6 931 aa12.39□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Pik3r2O08908 722 aa12.38□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Msx1P13297 303 aa12.38□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 Sox18P43680 377 aa12.38□□□□□ -0.43
Ccdc54-201ENSMUST00000062439 4930567H17RikQ3V0K5 233 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms