RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Hmox1P14901 289 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Pank1Q8K4K6 548 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 KarsQ99MN1 595 aaKnown RBP17.79■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Lrrcc1Q69ZB0 1026 aa17.79■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Necab1Q8BG18 352 aa17.79■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Ppp2r1aQ76MZ3 589 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Map3k1P53349 1493 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Wdr78E9PYY5 807 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Znhit6Q3UFB2 460 aaKnown RBP17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 AnlnQ8K298 1121 aaKnown RBP17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 TatQ8QZR1 454 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Nek4Q9Z1J2 792 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Neurod6P48986 337 aa17.78■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 HypkQ9CR41 129 aa17.77■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Gcom1E9PZ54 550 aa17.77■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 MyzapQ3UIJ9 466 aa17.77■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Ttll13A4Q9F6 804 aa17.77■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Znf710Q3U288 666 aa17.77■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Polr3gQ6NXY9 223 aa17.77■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 OptnQ8K3K8 584 aa17.77■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 PdcQ9QW08 244 aa17.77■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Chmp4cQ9D7F7 232 aa17.76■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Tubb6Q922F4 447 aa17.76■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Dhx8A2A4P0 1244 aaKnown RBP17.76■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Ccp110Q7TSH4 1004 aa17.76■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Gcc1Q9D4H2 778 aa17.76■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Plekhg5Q66T02 1073 aa17.75■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Kif3cO35066 796 aa17.75■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Fbxo2Q80UW2 297 aa17.75■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Ccdc43Q9CR29 222 aaKnown RBP17.74■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Drc7Q6V3W6 876 aa17.74■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Me1P06801 572 aa17.74■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Smc2Q8CG48 1191 aaKnown RBP17.74■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Arhgap31A6X8Z5 1425 aa17.73■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 PsapQ61207 557 aaKnown RBP17.73■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Arhgef5E9Q7D5 1581 aa17.73■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Arhgap5P97393 1501 aa17.72■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 PogkQ80TC5 607 aa17.72■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Mad1l1Q9WTX8 717 aaKnown RBP17.72■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Noc3lQ8VI84 807 aaKnown RBP17.72■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 Dixdc1Q80Y83 711 aa17.71■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 ScribQ80U72 1612 aa17.71■□□□□ 0.43
Pcdh20-201ENSMUST00000061628 March6Q6ZQ89 909 aa17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Nectin2P32507 530 aa17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Il16O54824 1322 aa17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Mphosph10Q810V0 681 aaKnown RBP17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Q9D9H8 365 aa17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Zfp444Q3TDV8 331 aaKnown RBP17.7■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Zkscan1Q8BGS3 561 aaKnown RBP17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Rufy1Q8BIJ7 712 aa17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Gnai2P08752 355 aaKnown RBP17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Zpr1Q62384 459 aa17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Atf3Q60765 181 aa17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Odf2lQ9D478 642 aa17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Hnrnpul1Q8VDM6 859 aaKnown RBP17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 TefQ9JLC6 301 aa17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Eif3aP23116 1344 aaKnown RBP17.69■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Fam163aQ8CAA5 168 aa17.68■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Slc4a2P13808 1237 aaKnown RBP17.68■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Sirt1Q923E4 737 aa17.68■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Duox2A2AQ99 1517 aa17.67■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Fchsd2Q3USJ8 740 aa17.67■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Nphp1Q9QY53 687 aa17.67■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Rad54l2Q99NG0 1466 aa17.67■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Ncapd3Q6ZQK0 1506 aa17.67■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Pdcl3Q8BVF2 240 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Dusp9Q7TNL7 452 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Gm7298A0A0N4SVU1 1476 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Anp32eP97822 260 aaKnown RBP17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Q7TT23 1179 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Gm10471E9Q1C7 252 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Taok2Q6ZQ29 1240 aa17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Urb2E9Q7L1 1524 aaKnown RBP17.66■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Zfp644E9QA22 1323 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Eva1cP58659 440 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Q9D9S1 216 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Prl7d1P04769 244 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Usp48Q3V0C5 1052 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Rhot2Q8JZN7 620 aa17.65■□□□□ 0.42
Pcdh20-201ENSMUST00000061628 Fgd6Q69ZL1 1399 aa17.64■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Gimap6Q8K349 305 aa17.64■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Nutm1Q8BHP2 1126 aa17.64■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Fmnl2A2APV2 1086 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 HmmrQ00547 794 aaKnown RBP17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Mns1Q61884 491 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Tnpo1Q8BFY9 898 aaKnown RBP17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Map3k5O35099 1380 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Cdkn1cP49919 348 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Nop14Q8R3N1 860 aaKnown RBP17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Stard3nlQ9DCI3 235 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Pip4k2aO70172 405 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Ppp4r3bQ922R5 820 aa17.63■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Rbm28Q8CGC6 750 aaKnown RBP17.62■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Ppm1fQ8CGA0 452 aa17.62■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Chaf1aQ9QWF0 911 aa17.61■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Arap1Q4LDD4 1452 aa17.6■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Washc2Q6PGL7 1334 aa17.6■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 IbtkQ6ZPR6 1352 aaKnown RBP17.59■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Slc52a2Q9D8F3 450 aa17.59■□□□□ 0.41
Pcdh20-201ENSMUST00000061628 Agtpbp1Q641K1 1218 aa17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms