RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Atp2b2Q9R0K7 1198 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Rab3gap2Q8BMG7 1366 aa6.3□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ift140E9PY46 1464 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Smarca2Q6DIC0 1577 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Tpm3P21107 285 aaKnown RBP6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 NcapgE9PWG6 1004 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Olfml1Q8BSH2 233 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Catsper2A2ARP9 588 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Zkscan2G3X952 960 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Usp48Q3V0C5 1052 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Erc2Q6PH08 957 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Synj1Q8CHC4 1574 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 CastP51125 788 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Taf3Q5HZG4 932 aa6.29□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Gprasp1Q5U4C1 1347 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Vgll3P85442 326 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Ints3Q7TPD0 1041 aaKnown RBP6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Naip5Q9R016 1403 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Polr3aB2RXC6 1390 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Tbc1d9Q3UYK3 1264 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 MvpQ9EQK5 861 aa6.28□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Map7d2A2AG50 781 aa6.27□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Mad1l1Q9WTX8 717 aaKnown RBP6.27□□□□□ -1.4
Ush2a-201ENSMUST00000060479 Gnai2P08752 355 aaKnown RBP6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Gse1Q3U3C9 1213 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Q3UPC7 1272 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cdk19Q8BWD8 501 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Anapc15P60007 132 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Stk3Q9JI10 497 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 PdcQ9QW08 244 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Sall3Q62255 1320 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Phlpp2Q8BXA7 1320 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Myom3A2ABU4 1439 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Aldh1l1Q8R0Y6 902 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cabp2Q9JLK4 216 aa6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Psma5Q9Z2U1 241 aaKnown RBP6.27□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cdc37l1Q9CZP7 335 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Nphp1Q9QY53 687 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 NrkQ9R0G8 1455 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Abcc5Q9R1X5 1436 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Erbb3Q61526 1339 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Samd1D3YXK1 519 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cfdp1O88271 295 aaKnown RBP6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Kdm2bQ6P1G2 1309 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Rnf20Q5DTM8 973 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Hmgn5Q9JL35 406 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Rasa1E9PYG6 1038 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Brd1E9PZ26 1189 aaKnown RBP6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Sh3bgrQ9WUZ7 214 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Pdcl2Q78Y63 240 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Bag4Q8CI61 457 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Bicd2Q921C5 820 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Tceal9Q9DD24 104 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 PalmQ9Z0P4 383 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 NexnQ7TPW1 607 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Smarca5Q91ZW3 1051 aaKnown RBP6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Rcan3Q9JKK0 239 aa6.26□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Ttc21bQ0HA38 1315 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Hnrnpul1Q8VDM6 859 aaKnown RBP6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Ppp1r18Q8BQ30 594 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 DmtnQ9WV69 405 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 4931400O07RikQ9D4M5 137 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cchcr1Q8K2I2 770 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Ankrd44B2RXR6 993 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Q9D9H8 365 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 MpripP97434 1024 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Gas2l2Q5SSG4 860 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 TmpoQ61033 693 aaKnown RBP6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Q8BT18 775 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Slc12a5Q91V14 1138 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Slc52a2Q9D8F3 450 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Wdr63B2RY71 923 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 AppP12023 770 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Ptpdc1Q6NZK8 747 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Nop14Q8R3N1 860 aaKnown RBP6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Q9D9S1 216 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 ErbinQ80TH2 1402 aa6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 AqrQ8CFQ3 1481 aaKnown RBP6.25□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Shroom4Q1W617 1475 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 NaspQ99MD9 773 aaKnown RBP6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Syce3B5KM66 88 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Top2aQ01320 1528 aaKnown RBP6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Aplp1Q03157 653 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Nol10Q5RJG1 687 aaKnown RBP6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cd109Q8R422 1442 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Tomm22Q9CPQ3 142 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Chmp3Q9CQ10 224 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Atf7ipQ7TT18 1306 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Srgap3Q812A2 1099 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Hoxa7P02830 229 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Fmnl2A2APV2 1086 aa6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Pdia3P27773 505 aaKnown RBP6.24□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Anapc15-psA0A140T8L6 141 aa6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Jakmip1Q8BVL9 626 aa6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 3425401B19RikD3Z1D3 1412 aa6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Anp32eP97822 260 aaKnown RBP6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Cdkn1cP49919 348 aa6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Hook1Q8BIL5 728 aa6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 PhaxQ9JJT9 385 aaKnown RBP6.23□□□□□ -1.41
Ush2a-201ENSMUST00000060479 Nsd2Q8BVE8 1365 aa6.23□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms