RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Rad54l2Q99NG0 1466 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Baz1bQ9Z277 1479 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Exoc6Q8R313 802 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Rbm19Q8R3C6 952 aaKnown RBP10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Usp48Q3V0C5 1052 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Cabp4Q8VHC5 271 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Luc7lQ9CYI4 371 aaKnown RBP10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Synj1Q8CHC4 1574 aa10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Chmp7Q8R1T1 451 aa10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Stk31Q99MW1 1018 aa10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Rbm28Q8CGC6 750 aaKnown RBP10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Rock2P70336 1388 aa10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Bcl11bQ99PV8 884 aa10.47□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Polr1aO35134 1717 aaKnown RBP10.46□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Nol12Q8BG17 217 aa10.46□□□□□ -0.73
Polr1a-201ENSMUST00000055296 OptnQ8K3K8 584 aa10.46□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Cdkn1cP49919 348 aa10.46□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Arid3cA6PWV5 409 aa10.46□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rbm5Q91YE7 815 aaKnown RBP10.46□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rnf187Q8BFX1 236 aa10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Ccdc112A0AUP1 442 aa10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Ccdc60Q8C4J0 545 aa10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Kif27Q7M6Z4 1394 aa10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Atad2bE9Q166 1460 aaKnown RBP10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Abcd1P48410 736 aa10.45□□□□□ -0.74
Polr1a-201ENSMUST00000055296 PogkQ80TC5 607 aa10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Map9Q3TRR0 646 aa10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Hmox1P14901 289 aa10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Map2k1P31938 393 aa10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Znf710Q3U288 666 aa10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rrp9Q91WM3 475 aaKnown RBP10.44□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Mia2Q91ZV0 1396 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 NexnQ7TPW1 607 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Fez1Q8K0X8 392 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 4921504E06RikQ8CET2 560 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Dydc1Q9D9T0 175 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Tmc1Q8R4P5 757 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Crybg2B7ZCC2 1516 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Bag1Q60739 355 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Larp1Q6ZQ58 1072 aaKnown RBP10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rnf214Q8BFU3 668 aaKnown RBP10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Tex19.1Q99MV2 351 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 TxlnaQ6PAM1 554 aaKnown RBP10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Fmnl2A2APV2 1086 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Stim1P70302 685 aa10.43□□□□□ -0.74
Polr1a-201ENSMUST00000055296 TchpQ3TVW5 497 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 SltmQ8CH25 1031 aaKnown RBP10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Kdm4aQ8BW72 1064 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Triml2E9PW10 424 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 IncenpQ9WU62 880 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Map4P27546 1125 aaKnown RBP10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Tsen2Q6P7W5 460 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Erc2Q6PH08 957 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Paip2Q9D6V8 124 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Mre11Q61216 706 aa10.42□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Pabpn1Q8CCS6 302 aaKnown RBP10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Agtpbp1Q641K1 1218 aa10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Pip4k2aO70172 405 aa10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Ppm1eQ80TL0 749 aa10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Hspa5P20029 655 aaKnown RBP10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Smc1aQ9CU62 1233 aaKnown RBP10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Cdca7Q9D0M2 382 aa10.41□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Ccdc191J3QQ27 883 aa10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 1700010I14RikQ7TPG0 532 aa10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rab3il1Q8VDV3 383 aa10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Kcnn1Q9EQR3 537 aa10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Eif3aP23116 1344 aaKnown RBP10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 TbcaP48428 108 aaKnown RBP10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Vps41Q5KU39 853 aa10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Rbm10Q99KG3 930 aaKnown RBP10.4□□□□□ -0.74
Polr1a-201ENSMUST00000055296 Lemd3Q9WU40 921 aa10.4□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Golim4Q8BXA1 655 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Frmd3Q8BHD4 595 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Fbf1A2A870 1173 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Tango6Q8C3S2 1079 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Rnf216P58283 853 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Zfp853A0A1D5RM95 733 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Pde1cQ64338 706 aa10.39□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Ehmt1Q5DW34 1296 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Stk3Q9JI10 497 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Ca8P28651 291 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Psma5Q9Z2U1 241 aaKnown RBP10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 CenpqQ9CPQ5 267 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Dhx57Q6P5D3 1388 aaKnown RBP10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Rab11fip3Q8CHD8 1047 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Frat2Q8K025 231 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Phldb2Q8K1N2 1249 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 CenpjQ569L8 1344 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Kcnh8P59111 1102 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Cchcr1Q8K2I2 770 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 AampJ3QN89 436 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Ccdc102aQ3TMW1 549 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Lamb3Q61087 1168 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Prpf4bQ61136 1007 aaKnown RBP10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Q9D2X8 372 aa10.38□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Cbx1P83917 185 aaKnown RBP10.37□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Ppfibp2O35711 882 aa10.37□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Serpina10Q8R121 448 aa10.37□□□□□ -0.75
Polr1a-201ENSMUST00000055296 ClasrpQ8CFC7 668 aa10.37□□□□□ -0.75
Polr1a-201ENSMUST00000055296 Ctage5Q8R311 779 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms