RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Pcdhgb4Q91XX6 912 aa7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 Lgr5Q9Z1P4 907 aa7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 DgkiD3YWQ0 1071 aa7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 Stk11ipQ3TAA7 1072 aa7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 Ints3Q7TPD0 1041 aaKnown RBP7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 TbceQ8CIV8 524 aa7.23□□□□□ -1.25
Clk1-201ENSMUST00000034868 Hap1O35668 628 aa7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 Rangap1P46061 589 aaKnown RBP7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 SympkQ80X82 1284 aa7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 Npas4Q8BGD7 802 aa7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 Mettl16Q9CQG2 553 aaKnown RBP7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 SmapQ9R0P4 181 aaKnown RBP7.22□□□□□ -1.25
Clk1-201ENSMUST00000034868 EgflamQ4VBE4 1017 aa7.21□□□□□ -1.25
Clk1-201ENSMUST00000034868 Cabp4Q8VHC5 271 aa7.21□□□□□ -1.25
Clk1-201ENSMUST00000034868 Mtmr1Q9Z2C4 669 aa7.21□□□□□ -1.25
Clk1-201ENSMUST00000034868 Fhod1Q6P9Q4 1197 aa7.2□□□□□ -1.26
Clk1-201ENSMUST00000034868 Trim33Q99PP7 1142 aa7.2□□□□□ -1.26
Clk1-201ENSMUST00000034868 Flt3Q00342 1000 aa7.2□□□□□ -1.26
Clk1-201ENSMUST00000034868 Gm20503G3UZK1 150 aa7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Usp48Q3V0C5 1052 aa7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 LpoQ5SW46 710 aa7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Rbm26Q6NZN0 1012 aaKnown RBP7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Znf467Q8JZL0 594 aa7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Sall2Q9QX96 1004 aa7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Prpf40aQ9R1C7 953 aaKnown RBP7.19□□□□□ -1.26
Clk1-201ENSMUST00000034868 Atp9bP98195 1146 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Fam13aQ8BGI4 693 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 1700019A02RikA0A087WPV9 146 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Large2Q5XPT3 690 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Tmem164Q6PHN7 296 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Sh3d21Q7TSG5 549 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Morc2bQ8C5W4 1022 aa7.18□□□□□ -1.26
Clk1-201ENSMUST00000034868 Tpp2Q64514 1262 aa7.17□□□□□ -1.26
Clk1-201ENSMUST00000034868 UstQ8BUB6 407 aa7.17□□□□□ -1.26
Clk1-201ENSMUST00000034868 Rbm10Q99KG3 930 aaKnown RBP7.17□□□□□ -1.26
Clk1-201ENSMUST00000034868 Thap8E9Q695 213 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Rhox13F6YCR7 232 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Sema3fO88632 785 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 ElnP54320 860 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Csrnp3P59055 597 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Eif4g2Q62448 906 aaKnown RBP7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Fbxo41Q6NS60 873 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Gimap8Q75N62 688 aa7.16□□□□□ -1.26
Clk1-201ENSMUST00000034868 Vamp1Q62442 118 aa7.15□□□□□ -1.26
Clk1-201ENSMUST00000034868 Wdr44Q6NVE8 915 aa7.15□□□□□ -1.26
Clk1-201ENSMUST00000034868 Brd2Q7JJ13 798 aaKnown RBP7.15□□□□□ -1.26
Clk1-201ENSMUST00000034868 Plpp7Q91WB2 271 aa7.15□□□□□ -1.26
Clk1-201ENSMUST00000034868 DgkhD3YXJ0 1156 aa7.15□□□□□ -1.27
Clk1-201ENSMUST00000034868 Stard8Q8K031 1019 aa7.15□□□□□ -1.27
Clk1-201ENSMUST00000034868 MypopQ8R4U1 393 aa7.15□□□□□ -1.27
Clk1-201ENSMUST00000034868 Tpcn1Q9EQJ0 817 aa7.15□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gpatch11Q3UFS4 262 aa7.14□□□□□ -1.27
Clk1-201ENSMUST00000034868 Tigd5Q499M4 642 aa7.14□□□□□ -1.27
Clk1-201ENSMUST00000034868 Nop9Q8BMC4 636 aaKnown RBP7.14□□□□□ -1.27
Clk1-201ENSMUST00000034868 SrrtQ99MR6 875 aaKnown RBP7.14□□□□□ -1.27
Clk1-201ENSMUST00000034868 4930523C07RikE9Q2T4 99 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Zfp943Q6NZP4 507 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Trak1Q6PD31 939 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rccd1Q8BTU7 377 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Eno4Q8C042 619 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gdpd2Q9ESM6 539 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Hsp90b1P08113 802 aaKnown RBP7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 P4hbP09103 509 aaKnown RBP7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rnf166Q3U9F6 237 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rbm27Q5SFM8 1060 aaKnown RBP7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Pcdhb3Q91XZ7 784 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Q9CQ90 155 aa7.13□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gm21663A0A0G2JE01 267 aa7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 SafbD3YXK2 937 aaKnown RBP7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 5031410I06RikE9Q4E0 267 aa7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gm5862K7N5V5 267 aa7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gm10220K7N660 267 aa7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 Chmp3Q9CQ10 224 aa7.12□□□□□ -1.27
Clk1-201ENSMUST00000034868 Speer4f2E9Q366 295 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Axin1O35625 863 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Sec1P97353 368 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Ttll12Q3UDE2 639 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Bms1Q6PGF5 1284 aaKnown RBP7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rint1Q8BZ36 792 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 CactinQ9CS00 772 aaKnown RBP7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Col17a1Q07563 1470 aa7.11□□□□□ -1.27
Clk1-201ENSMUST00000034868 Wdr66E9Q743 1299 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Mdm2P23804 489 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 FanccP50652 591 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Podxl2Q8CAE9 603 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rab11fip3Q8CHD8 1047 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Ipo4Q8VI75 1082 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Gtf2ird1Q9JI57 1104 aaKnown RBP7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Ccr5P51682 354 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Iqcf4Q6P8Y2 204 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Arid5bQ8BM75 1188 aaKnown RBP7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Sik2Q8CFH6 931 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Cd2apQ9JLQ0 637 aa7.1□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rasa1E9PYG6 1038 aa7.09□□□□□ -1.27
Clk1-201ENSMUST00000034868 Dkk1O54908 272 aa7.09□□□□□ -1.27
Clk1-201ENSMUST00000034868 Ptk2P34152 1090 aa7.09□□□□□ -1.27
Clk1-201ENSMUST00000034868 Best3Q6H1V1 669 aa7.09□□□□□ -1.27
Clk1-201ENSMUST00000034868 Rtn1Q8K0T0 780 aa7.09□□□□□ -1.27
Clk1-201ENSMUST00000034868 AampJ3QN89 436 aa7.08□□□□□ -1.28
Clk1-201ENSMUST00000034868 Znf692Q3U381 531 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms