RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Polr3glQ8R0C0 218 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Armcx1Q9CX83 456 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Znf518aB2RRF6 1478 aaKnown RBP14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Ak7Q9D2H2 614 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Stag3O70576 1240 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Trim26Q99PN3 545 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 AU022751B1B0V2 589 aa14.68□□□□□ -0.06
Vps54-201ENSMUST00000006221 Apaf1O88879 1249 aa14.67□□□□□ -0.06
Vps54-201ENSMUST00000006221 PtprtQ99M80 1454 aa14.67□□□□□ -0.06
Vps54-201ENSMUST00000006221 Talpid3E9PV87 1520 aa14.67□□□□□ -0.06
Vps54-201ENSMUST00000006221 Prex1Q69ZK0 1650 aa14.67□□□□□ -0.06
Vps54-201ENSMUST00000006221 Zranb1Q7M760 708 aa14.66□□□□□ -0.06
Vps54-201ENSMUST00000006221 Mapk8ip3Q9ESN9 1337 aa14.66□□□□□ -0.06
Vps54-201ENSMUST00000006221 IbtkQ6ZPR6 1352 aaKnown RBP14.65□□□□□ -0.06
Vps54-201ENSMUST00000006221 Duxf3A0A0N4SV92 674 aa14.65□□□□□ -0.06
Vps54-201ENSMUST00000006221 GsdmaQ9EST1 446 aa14.65□□□□□ -0.06
Vps54-201ENSMUST00000006221 Adgrb3Q80ZF8 1522 aa14.65□□□□□ -0.06
Vps54-201ENSMUST00000006221 ArxO35085 564 aa14.65□□□□□ -0.06
Vps54-201ENSMUST00000006221 4933416C03RikQ3V063 378 aa14.64□□□□□ -0.07
Vps54-201ENSMUST00000006221 Znf521Q6KAS7 1311 aa14.64□□□□□ -0.07
Vps54-201ENSMUST00000006221 Efcab6Q6P1E8 1516 aa14.64□□□□□ -0.07
Vps54-201ENSMUST00000006221 Map4k4P97820 1233 aaKnown RBP14.63□□□□□ -0.07
Vps54-201ENSMUST00000006221 Scaf11E9PZM7 1456 aaKnown RBP14.63□□□□□ -0.07
Vps54-201ENSMUST00000006221 Zmym3Q9JLM4 1370 aa14.63□□□□□ -0.07
Vps54-201ENSMUST00000006221 DnmbpQ6TXD4 1580 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Cald1E9QA15 768 aaKnown RBP14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ppp1r3fQ9JIG4 799 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ppm1gQ61074 542 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ccdc183A2AJB1 534 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Trim58Q5NCC9 485 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ipo8Q7TMY7 1010 aa14.62□□□□□ -0.07
Vps54-201ENSMUST00000006221 Mre11Q61216 706 aa14.61□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ehbp1l1Q99MS7 1716 aa14.61□□□□□ -0.07
Vps54-201ENSMUST00000006221 Hsp90ab1P11499 724 aaKnown RBP14.61□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ksr2Q3UVC0 959 aa14.61□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ptch1Q61115 1434 aa14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 Myom2Q14BI5 1463 aa14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 U2af1Q9D883 239 aaKnown RBP14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ecm2Q5FW85 670 aa14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 Ccdc9Q8VC31 543 aaKnown RBP14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 Trpm1Q2TV84 1622 aa14.6□□□□□ -0.07
Vps54-201ENSMUST00000006221 Sipa1l1Q8C0T5 1782 aa14.59□□□□□ -0.07
Vps54-201ENSMUST00000006221 Iqsec2Q5DU25 1478 aa14.59□□□□□ -0.07
Vps54-201ENSMUST00000006221 Uggt1Q6P5E4 1551 aa14.59□□□□□ -0.07
Vps54-201ENSMUST00000006221 Pnmal2G3X9N3 661 aa14.59□□□□□ -0.07
Vps54-201ENSMUST00000006221 Stk26Q99JT2 416 aa14.59□□□□□ -0.07
Vps54-201ENSMUST00000006221 KarsQ99MN1 595 aaKnown RBP14.58□□□□□ -0.07
Vps54-201ENSMUST00000006221 Tsen2Q6P7W5 460 aa14.58□□□□□ -0.08
Vps54-201ENSMUST00000006221 Gtf3c3Q3TMP1 882 aa14.58□□□□□ -0.08
Vps54-201ENSMUST00000006221 Topbp1Q6ZQF0 1515 aa14.57□□□□□ -0.08
Vps54-201ENSMUST00000006221 Rangap1P46061 589 aaKnown RBP14.57□□□□□ -0.08
Vps54-201ENSMUST00000006221 PalldQ9ET54 1408 aa14.57□□□□□ -0.08
Vps54-201ENSMUST00000006221 Gli2Q0VGT2 1544 aa14.57□□□□□ -0.08
Vps54-201ENSMUST00000006221 Irx3P81067 507 aa14.57□□□□□ -0.08
Vps54-201ENSMUST00000006221 Lrrc7Q80TE7 1490 aa14.56□□□□□ -0.08
Vps54-201ENSMUST00000006221 InsrP15208 1372 aa14.56□□□□□ -0.08
Vps54-201ENSMUST00000006221 OvosQ3UU35 1456 aa14.55□□□□□ -0.08
Vps54-201ENSMUST00000006221 Ppp1r9bQ6R891 817 aaKnown RBP14.55□□□□□ -0.08
Vps54-201ENSMUST00000006221 IqubQ8CDK3 788 aa14.55□□□□□ -0.08
Vps54-201ENSMUST00000006221 KdrP35918 1367 aa14.55□□□□□ -0.08
Vps54-201ENSMUST00000006221 Gm6268A2A3U9 297 aa14.54□□□□□ -0.08
Vps54-201ENSMUST00000006221 Cluap1Q8R3P7 413 aa14.54□□□□□ -0.08
Vps54-201ENSMUST00000006221 Dusp27Q148W8 1138 aa14.54□□□□□ -0.08
Vps54-201ENSMUST00000006221 Exosc9Q9JHI7 438 aaKnown RBP14.53□□□□□ -0.08
Vps54-201ENSMUST00000006221 Skint5A7XUY5 1461 aa14.53□□□□□ -0.08
Vps54-201ENSMUST00000006221 MaddQ80U28 1577 aa14.52□□□□□ -0.08
Vps54-201ENSMUST00000006221 Atp1b4Q99ME6 356 aa14.52□□□□□ -0.09
Vps54-201ENSMUST00000006221 CenpjQ569L8 1344 aa14.52□□□□□ -0.09
Vps54-201ENSMUST00000006221 Prdm2A2A7B5 1709 aaKnown RBP14.52□□□□□ -0.09
Vps54-201ENSMUST00000006221 Fam135bQ9DAI6 1403 aa14.52□□□□□ -0.09
Vps54-201ENSMUST00000006221 Ppp2r3aB2RXC8 1150 aa14.5□□□□□ -0.09
Vps54-201ENSMUST00000006221 Depdc5P61460 1591 aa14.5□□□□□ -0.09
Vps54-201ENSMUST00000006221 Tecpr2Q3UH45 1423 aa14.5□□□□□ -0.09
Vps54-201ENSMUST00000006221 Znf330Q922H9 316 aa14.5□□□□□ -0.09
Vps54-201ENSMUST00000006221 Ccar1Q8CH18 1146 aaKnown RBP14.49□□□□□ -0.09
Vps54-201ENSMUST00000006221 Tmc1Q8R4P5 757 aa14.49□□□□□ -0.09
Vps54-201ENSMUST00000006221 Adgrl1Q80TR1 1466 aa14.48□□□□□ -0.09
Vps54-201ENSMUST00000006221 Slc52a2Q9D8F3 450 aa14.48□□□□□ -0.09
Vps54-201ENSMUST00000006221 Ino80Q6ZPV2 1559 aa14.48□□□□□ -0.09
Vps54-201ENSMUST00000006221 Plcd4Q8K3R3 807 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Pdlim2Q8R1G6 349 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Hfm1D3Z4R1 1434 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 AU019823E9PUQ3 292 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Shq1Q7TMX5 569 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Tnpo1Q8BFY9 898 aaKnown RBP14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Atp10aO54827 1508 aa14.47□□□□□ -0.09
Vps54-201ENSMUST00000006221 Ift172Q6VH22 1749 aa14.46□□□□□ -0.09
Vps54-201ENSMUST00000006221 Kiaa0556Q8C753 1610 aa14.46□□□□□ -0.09
Vps54-201ENSMUST00000006221 Mroh1E0CZ22 1640 aa14.46□□□□□ -0.1
Vps54-201ENSMUST00000006221 Senp3Q9EP97 568 aaKnown RBP14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Ttc37F8VPK0 1563 aa14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Nrxn1Q9CS84 1514 aa14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Nutm1Q8BHP2 1126 aa14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Plxnc1Q9QZC2 1574 aa14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Sptbn5F6UCX4 1208 aa14.45□□□□□ -0.1
Vps54-201ENSMUST00000006221 Adgrl3Q80TS3 1537 aa14.44□□□□□ -0.1
Vps54-201ENSMUST00000006221 Cfap65Q3V0B4 1847 aa14.44□□□□□ -0.1
Vps54-201ENSMUST00000006221 Cep170bQ80U49 1574 aa14.44□□□□□ -0.1
Vps54-201ENSMUST00000006221 CastP51125 788 aa14.44□□□□□ -0.1
Vps54-201ENSMUST00000006221 Akap12Q9WTQ5 1684 aa14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms