RNA–Protein interactions for RNA: ENSMUST00000005630.10

Msh4-201, Transcript of MutS protein homolog 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh4, Length 3,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-201ENSMUST00000005630 KdrP35918 1367 aa16.81■□□□□ 0.28
Msh4-201ENSMUST00000005630 Cnga1P29974 684 aa16.81■□□□□ 0.28
Msh4-201ENSMUST00000005630 PalldQ9ET54 1408 aa16.81■□□□□ 0.28
Msh4-201ENSMUST00000005630 Rwdd1Q9CQK7 243 aa16.81■□□□□ 0.28
Msh4-201ENSMUST00000005630 Kiaa0556Q8C753 1610 aa16.81■□□□□ 0.28
Msh4-201ENSMUST00000005630 Knl1Q66JQ7 1612 aa16.8■□□□□ 0.28
Msh4-201ENSMUST00000005630 Uspl1Q3ULM6 1089 aa16.8■□□□□ 0.28
Msh4-201ENSMUST00000005630 Mbd3Q9Z2D8 285 aaKnown RBP16.8■□□□□ 0.28
Msh4-201ENSMUST00000005630 Scaf11E9PZM7 1456 aaKnown RBP16.79■□□□□ 0.28
Msh4-201ENSMUST00000005630 Neurod2Q62414 383 aa16.79■□□□□ 0.28
Msh4-201ENSMUST00000005630 Bcl11aQ9QYE3 773 aa16.79■□□□□ 0.28
Msh4-201ENSMUST00000005630 Apbb1Q9QXJ1 710 aa16.79■□□□□ 0.28
Msh4-201ENSMUST00000005630 Skint5A7XUY5 1461 aa16.78■□□□□ 0.28
Msh4-201ENSMUST00000005630 IbtkQ6ZPR6 1352 aaKnown RBP16.78■□□□□ 0.28
Msh4-201ENSMUST00000005630 Adgrl3Q80TS3 1537 aa16.78■□□□□ 0.28
Msh4-201ENSMUST00000005630 Adgrl1Q80TR1 1466 aa16.78■□□□□ 0.28
Msh4-201ENSMUST00000005630 B4galnt3Q6L8S8 986 aa16.77■□□□□ 0.27
Msh4-201ENSMUST00000005630 Nlrp6Q91WS2 869 aa16.77■□□□□ 0.27
Msh4-201ENSMUST00000005630 Prdm10Q3UTQ7 1184 aa16.76■□□□□ 0.27
Msh4-201ENSMUST00000005630 ChgaP26339 463 aaKnown RBP16.76■□□□□ 0.27
Msh4-201ENSMUST00000005630 Golga2Q921M4 999 aa16.76■□□□□ 0.27
Msh4-201ENSMUST00000005630 Adamts7Q68SA9 1657 aa16.75■□□□□ 0.27
Msh4-201ENSMUST00000005630 InsrP15208 1372 aa16.75■□□□□ 0.27
Msh4-201ENSMUST00000005630 Ttc37F8VPK0 1563 aa16.74■□□□□ 0.27
Msh4-201ENSMUST00000005630 Eif2ak4Q9QZ05 1648 aa16.74■□□□□ 0.27
Msh4-201ENSMUST00000005630 Zmym3Q9JLM4 1370 aa16.74■□□□□ 0.27
Msh4-201ENSMUST00000005630 Nrxn1Q9CS84 1514 aa16.74■□□□□ 0.27
Msh4-201ENSMUST00000005630 Tspyl2Q7TQI8 677 aa16.73■□□□□ 0.27
Msh4-201ENSMUST00000005630 Hecw2Q6I6G8 1578 aa16.73■□□□□ 0.27
Msh4-201ENSMUST00000005630 Qser1A2BIE1 1698 aa16.73■□□□□ 0.27
Msh4-201ENSMUST00000005630 Nkx1-2P42580 305 aa16.72■□□□□ 0.27
Msh4-201ENSMUST00000005630 Yeats2Q3TUF7 1407 aa16.72■□□□□ 0.27
Msh4-201ENSMUST00000005630 Atxn3Q9CVD2 355 aa16.72■□□□□ 0.27
Msh4-201ENSMUST00000005630 Smc5Q8CG46 1101 aaKnown RBP16.72■□□□□ 0.27
Msh4-201ENSMUST00000005630 Map4k4P97820 1233 aaKnown RBP16.71■□□□□ 0.27
Msh4-201ENSMUST00000005630 Ccdc27Q3V036 639 aa16.71■□□□□ 0.27
Msh4-201ENSMUST00000005630 Dbr1Q923B1 550 aa16.71■□□□□ 0.27
Msh4-201ENSMUST00000005630 Znf521Q6KAS7 1311 aa16.7■□□□□ 0.26
Msh4-201ENSMUST00000005630 Stag3O70576 1240 aa16.7■□□□□ 0.26
Msh4-201ENSMUST00000005630 Hfm1D3Z4R1 1434 aa16.7■□□□□ 0.26
Msh4-201ENSMUST00000005630 Cfap65Q3V0B4 1847 aa16.7■□□□□ 0.26
Msh4-201ENSMUST00000005630 Cep170bQ80U49 1574 aa16.69■□□□□ 0.26
Msh4-201ENSMUST00000005630 Iqcf3Q9D498 203 aa16.69■□□□□ 0.26
Msh4-201ENSMUST00000005630 Ralbp1Q62172 648 aa16.69■□□□□ 0.26
Msh4-201ENSMUST00000005630 PtprmP28828 1452 aa16.69■□□□□ 0.26
Msh4-201ENSMUST00000005630 Med14A2ABV5 1459 aaKnown RBP16.68■□□□□ 0.26
Msh4-201ENSMUST00000005630 Zranb1Q7M760 708 aa16.68■□□□□ 0.26
Msh4-201ENSMUST00000005630 Ahdc1Q6PAL7 1594 aaKnown RBP16.67■□□□□ 0.26
Msh4-201ENSMUST00000005630 Cald1E9QA15 768 aaKnown RBP16.67■□□□□ 0.26
Msh4-201ENSMUST00000005630 EspnQ9ET47 871 aa16.67■□□□□ 0.26
Msh4-201ENSMUST00000005630 CltcQ68FD5 1675 aaKnown RBP16.66■□□□□ 0.26
Msh4-201ENSMUST00000005630 Kif13aQ9EQW7 1749 aa16.66■□□□□ 0.26
Msh4-201ENSMUST00000005630 Pank1Q8K4K6 548 aa16.65■□□□□ 0.26
Msh4-201ENSMUST00000005630 Slc52a2Q9D8F3 450 aa16.65■□□□□ 0.26
Msh4-201ENSMUST00000005630 GsdmaQ9EST1 446 aa16.65■□□□□ 0.26
Msh4-201ENSMUST00000005630 Chmp5Q9D7S9 219 aa16.65■□□□□ 0.26
Msh4-201ENSMUST00000005630 Arhgef28P97433 1693 aa16.65■□□□□ 0.26
Msh4-201ENSMUST00000005630 Arhgap23Q69ZH9 1483 aa16.64■□□□□ 0.25
Msh4-201ENSMUST00000005630 Prrc2bQ7TPM1 1486 aaKnown RBP16.64■□□□□ 0.25
Msh4-201ENSMUST00000005630 Abca14E9Q8F8 1683 aa16.63■□□□□ 0.25
Msh4-201ENSMUST00000005630 Gm156Q58A37 223 aa16.63■□□□□ 0.25
Msh4-201ENSMUST00000005630 Rlbp1Q9Z275 317 aa16.63■□□□□ 0.25
Msh4-201ENSMUST00000005630 Itsn1Q9Z0R4 1714 aa16.62■□□□□ 0.25
Msh4-201ENSMUST00000005630 Apaf1O88879 1249 aa16.62■□□□□ 0.25
Msh4-201ENSMUST00000005630 CenpjQ569L8 1344 aa16.61■□□□□ 0.25
Msh4-201ENSMUST00000005630 Duxf3A0A0N4SV92 674 aa16.6■□□□□ 0.25
Msh4-201ENSMUST00000005630 NudcO35685 332 aaKnown RBP16.6■□□□□ 0.25
Msh4-201ENSMUST00000005630 Pabpn1Q8CCS6 302 aaKnown RBP16.6■□□□□ 0.25
Msh4-201ENSMUST00000005630 NktrP30415 1453 aa16.59■□□□□ 0.25
Msh4-201ENSMUST00000005630 IqubQ8CDK3 788 aa16.59■□□□□ 0.25
Msh4-201ENSMUST00000005630 Stk26Q99JT2 416 aa16.58■□□□□ 0.25
Msh4-201ENSMUST00000005630 Fam135bQ9DAI6 1403 aa16.58■□□□□ 0.25
Msh4-201ENSMUST00000005630 PplQ9R269 1755 aa16.58■□□□□ 0.24
Msh4-201ENSMUST00000005630 Mapk8ip3Q9ESN9 1337 aa16.56■□□□□ 0.24
Msh4-201ENSMUST00000005630 DiexfQ8BTT6 772 aaKnown RBP16.56■□□□□ 0.24
Msh4-201ENSMUST00000005630 Trim58Q5NCC9 485 aa16.55■□□□□ 0.24
Msh4-201ENSMUST00000005630 Ppp1r3fQ9JIG4 799 aa16.55■□□□□ 0.24
Msh4-201ENSMUST00000005630 Tsen2Q6P7W5 460 aa16.54■□□□□ 0.24
Msh4-201ENSMUST00000005630 Sart3Q9JLI8 962 aaKnown RBP16.53■□□□□ 0.24
Msh4-201ENSMUST00000005630 Usp32F8VPZ3 1604 aa16.53■□□□□ 0.24
Msh4-201ENSMUST00000005630 U2af1Q9D883 239 aaKnown RBP16.53■□□□□ 0.24
Msh4-201ENSMUST00000005630 CanxP35564 591 aaKnown RBP16.53■□□□□ 0.24
Msh4-201ENSMUST00000005630 Shq1Q7TMX5 569 aa16.53■□□□□ 0.24
Msh4-201ENSMUST00000005630 Nwd1A6H603 1563 aa16.52■□□□□ 0.24
Msh4-201ENSMUST00000005630 Ksr2Q3UVC0 959 aa16.51■□□□□ 0.23
Msh4-201ENSMUST00000005630 Exosc9Q9JHI7 438 aaKnown RBP16.51■□□□□ 0.23
Msh4-201ENSMUST00000005630 NinlQ6ZQ12 1394 aa16.51■□□□□ 0.23
Msh4-201ENSMUST00000005630 Dusp27Q148W8 1138 aa16.5■□□□□ 0.23
Msh4-201ENSMUST00000005630 Ak7Q9D2H2 614 aa16.5■□□□□ 0.23
Msh4-201ENSMUST00000005630 Ncbp3Q8BZR9 615 aaKnown RBP16.5■□□□□ 0.23
Msh4-201ENSMUST00000005630 Naip7Q9JIB3 1402 aa16.5■□□□□ 0.23
Msh4-201ENSMUST00000005630 4930567H17RikQ3V0K5 233 aa16.48■□□□□ 0.23
Msh4-201ENSMUST00000005630 Dnai1Q8C0M8 701 aa16.48■□□□□ 0.23
Msh4-201ENSMUST00000005630 Synj2Q9D2G5 1434 aa16.48■□□□□ 0.23
Msh4-201ENSMUST00000005630 Trim26Q99PN3 545 aa16.47■□□□□ 0.23
Msh4-201ENSMUST00000005630 Q9D9H8 365 aa16.47■□□□□ 0.23
Msh4-201ENSMUST00000005630 Uhrf1bp1B2KF50 1429 aa16.47■□□□□ 0.23
Msh4-201ENSMUST00000005630 Ccdc183A2AJB1 534 aa16.47■□□□□ 0.23
Msh4-201ENSMUST00000005630 Pnmal2G3X9N3 661 aa16.47■□□□□ 0.23
Msh4-201ENSMUST00000005630 Znf541Q0GGX2 1363 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms