RNA–Protein interactions for RNA: ENSMUST00000000767.5

Rpa1-201, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpa1, Length 2,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-201ENSMUST00000000767 Cdk5rap2Q8K389 1822 aa12.6□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Map4k4P97820 1233 aaKnown RBP12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Mre11Q61216 706 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Abca8aQ8K442 1620 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Ythdc2B2RR83 1445 aaKnown RBP12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Abca9Q8K449 1623 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Ipo8Q7TMY7 1010 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Atxn3Q9CVD2 355 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 GsdmaQ9EST1 446 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Talpid3E9PV87 1520 aa12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Myom1Q62234 1667 aaKnown RBP12.59□□□□□ -0.39
Rpa1-201ENSMUST00000000767 Hsp90ab1P11499 724 aaKnown RBP12.58□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Eif2s2Q99L45 331 aaKnown RBP12.58□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Trim58Q5NCC9 485 aa12.58□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Irx3P81067 507 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 P2rx7Q9Z1M0 595 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 IbtkQ6ZPR6 1352 aaKnown RBP12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Adgrb3Q80ZF8 1522 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Trim26Q99PN3 545 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Armcx1Q9CX83 456 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Prex1Q69ZK0 1650 aa12.56□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Efcab6Q6P1E8 1516 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Ccdc183A2AJB1 534 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 DnmbpQ6TXD4 1580 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Myom2Q14BI5 1463 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Duxf3A0A0N4SV92 674 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 IqubQ8CDK3 788 aa12.55□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Uggt1Q6P5E4 1551 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Scaf11E9PZM7 1456 aaKnown RBP12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Znf521Q6KAS7 1311 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Cald1E9QA15 768 aaKnown RBP12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Gtf3c3Q3TMP1 882 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Apaf1O88879 1249 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Rlbp1Q9Z275 317 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Ehbp1l1Q99MS7 1716 aa12.54□□□□□ -0.4
Rpa1-201ENSMUST00000000767 Ksr2Q3UVC0 959 aa12.53□□□□□ -0.4
Rpa1-201ENSMUST00000000767 AU022751B1B0V2 589 aa12.53□□□□□ -0.4
Rpa1-201ENSMUST00000000767 ArxO35085 564 aa12.52□□□□□ -0.4
Rpa1-201ENSMUST00000000767 U2af1Q9D883 239 aaKnown RBP12.52□□□□□ -0.4
Rpa1-201ENSMUST00000000767 KdrP35918 1367 aa12.52□□□□□ -0.41
Rpa1-201ENSMUST00000000767 PtprtQ99M80 1454 aa12.52□□□□□ -0.41
Rpa1-201ENSMUST00000000767 PalldQ9ET54 1408 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Topbp1Q6ZQF0 1515 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Tsen2Q6P7W5 460 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 InsrP15208 1372 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 OvosQ3UU35 1456 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Sipa1l1Q8C0T5 1782 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Trpm1Q2TV84 1622 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Iqsec2Q5DU25 1478 aa12.51□□□□□ -0.41
Rpa1-201ENSMUST00000000767 CenpjQ569L8 1344 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Plppr3Q7TPB0 716 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Tmc1Q8R4P5 757 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Skint5A7XUY5 1461 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Lrrc7Q80TE7 1490 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Gli2Q0VGT2 1544 aa12.5□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Ppp1r9bQ6R891 817 aaKnown RBP12.49□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Exosc9Q9JHI7 438 aaKnown RBP12.49□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Fam135bQ9DAI6 1403 aa12.49□□□□□ -0.41
Rpa1-201ENSMUST00000000767 CatipB9EKE5 520 aa12.49□□□□□ -0.41
Rpa1-201ENSMUST00000000767 KarsQ99MN1 595 aaKnown RBP12.49□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Depdc5P61460 1591 aa12.48□□□□□ -0.41
Rpa1-201ENSMUST00000000767 AampJ3QN89 436 aa12.48□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Ccar1Q8CH18 1146 aaKnown RBP12.48□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Stk26Q99JT2 416 aa12.48□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Ppp2r3aB2RXC8 1150 aa12.48□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Ptch1Q61115 1434 aa12.47□□□□□ -0.41
Rpa1-201ENSMUST00000000767 MaddQ80U28 1577 aa12.47□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Gm6268A2A3U9 297 aa12.47□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Atp1b4Q99ME6 356 aa12.46□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Slc52a2Q9D8F3 450 aa12.46□□□□□ -0.41
Rpa1-201ENSMUST00000000767 Hfm1D3Z4R1 1434 aa12.46□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Dusp27Q148W8 1138 aa12.45□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Zranb1Q7M760 708 aa12.45□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Tecpr2Q3UH45 1423 aa12.45□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Cluap1Q8R3P7 413 aa12.45□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Eif2ak4Q9QZ05 1648 aa12.45□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Plxnc1Q9QZC2 1574 aa12.44□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Ppp1r3fQ9JIG4 799 aa12.44□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Rangap1P46061 589 aaKnown RBP12.44□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Prdm2A2A7B5 1709 aaKnown RBP12.43□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Adgrl3Q80TS3 1537 aa12.43□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Akap12Q9WTQ5 1684 aa12.43□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Ino80Q6ZPV2 1559 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Atl3Q91YH5 541 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Atp10aO54827 1508 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Sptbn5F6UCX4 1208 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Pnmal2G3X9N3 661 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Adgrl1Q80TR1 1466 aa12.42□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Htatsf1Q8BGC0 757 aa12.41□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Pdlim2Q8R1G6 349 aa12.41□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Tnpo1Q8BFY9 898 aaKnown RBP12.41□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Ncbp3Q8BZR9 615 aaKnown RBP12.41□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Shq1Q7TMX5 569 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Ift172Q6VH22 1749 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Ttc37F8VPK0 1563 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Mroh1E0CZ22 1640 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Rabep1O35551 862 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Znf330Q922H9 316 aa12.4□□□□□ -0.42
Rpa1-201ENSMUST00000000767 Plcd4Q8K3R3 807 aa12.39□□□□□ -0.43
Rpa1-201ENSMUST00000000767 Kiaa0556Q8C753 1610 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms