RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W XRN1P22147 1528 aaKnown RBP-1.28□□□□□ -2.61
VAM3YOR106W YDR182W-AQ3E796 67 aa-1.29□□□□□ -2.62
VAM3YOR106W SWR1Q05471 1514 aa-1.3□□□□□ -2.62
VAM3YOR106W YIL156W-BQ2V2P4 73 aa-1.3□□□□□ -2.62
VAM3YOR106W NUM1Q00402 2748 aa-1.34□□□□□ -2.62
VAM3YOR106W YKL018C-AQ3E7A7 99 aa-1.34□□□□□ -2.62
VAM3YOR106W YOR008C-AQ3E7B9 74 aa-1.34□□□□□ -2.62
VAM3YOR106W CSF1Q12150 2958 aa-1.35□□□□□ -2.62
VAM3YOR106W SIP18P50263 79 aa-1.36□□□□□ -2.63
VAM3YOR106W SPO14P36126 1683 aa-1.36□□□□□ -2.63
VAM3YOR106W YOR105WQ08504 108 aa-1.37□□□□□ -2.63
VAM3YOR106W YCL001W-BQ96VH2 84 aa-1.37□□□□□ -2.63
VAM3YOR106W TY1B-NL2Q99337 1749 aaKnown RBP-1.39□□□□□ -2.63
VAM3YOR106W YOR343CQ12484 108 aa-1.39□□□□□ -2.63
VAM3YOR106W VTH1P40438 1549 aa-1.4□□□□□ -2.63
VAM3YOR106W VTH2P40890 1549 aa-1.4□□□□□ -2.63
VAM3YOR106W ZEO1Q08245 113 aa-1.4□□□□□ -2.63
VAM3YOR106W PDR10P51533 1564 aa-1.41□□□□□ -2.63
VAM3YOR106W APC1P53886 1748 aa-1.41□□□□□ -2.64
VAM3YOR106W SMC4Q12267 1418 aa-1.41□□□□□ -2.64
VAM3YOR106W TOS6P48560 102 aa-1.42□□□□□ -2.64
VAM3YOR106W TRA1P38811 3744 aa-1.42□□□□□ -2.64
VAM3YOR106W RPS27AP35997 82 aaKnown RBP-1.43□□□□□ -2.64
VAM3YOR106W OLI1P61829 76 aa-1.43□□□□□ -2.64
VAM3YOR106W YLR146W-AQ2V2P1 62 aa-1.45□□□□□ -2.64
VAM3YOR106W YDL022C-AP0C5L6 82 aa-1.46□□□□□ -2.64
VAM3YOR106W IRA2P19158 3079 aa-1.47□□□□□ -2.64
VAM3YOR106W YMR082CQ04276 118 aa-1.47□□□□□ -2.64
VAM3YOR106W POC4Q12245 148 aaPredicted RBP-1.47□□□□□ -2.64
VAM3YOR106W YLL006W-AQ3E814 58 aa-1.47□□□□□ -2.64
VAM3YOR106W YMR175W-AQ3E766 64 aa-1.48□□□□□ -2.65
VAM3YOR106W CUP1-1P0CX80 61 aa-1.49□□□□□ -2.65
VAM3YOR106W CUP1-2P0CX81 61 aa-1.49□□□□□ -2.65
VAM3YOR106W IRA1P18963 3092 aa-1.5□□□□□ -2.65
VAM3YOR106W IRC20Q06554 1556 aa-1.5□□□□□ -2.65
VAM3YOR106W YPL225WQ08971 146 aaKnown RBP-1.5□□□□□ -2.65
VAM3YOR106W YCR075W-AQ3E830 75 aa-1.5□□□□□ -2.65
VAM3YOR106W LSM2P38203 95 aaKnown RBP-1.51□□□□□ -2.65
VAM3YOR106W SIN3P22579 1536 aa-1.51□□□□□ -2.65
VAM3YOR106W YPR145C-AQ2V2P0 78 aa-1.53□□□□□ -2.65
VAM3YOR106W YKL065W-AQ2V2P2 73 aa-1.54□□□□□ -2.66
VAM3YOR106W YGL258W-AQ3E740 77 aa-1.54□□□□□ -2.66
VAM3YOR106W YOR394C-AQ8TGJ0 55 aa-1.55□□□□□ -2.66
VAM3YOR106W YOR314WQ12506 109 aa-1.56□□□□□ -2.66
VAM3YOR106W YBR200W-AQ3E755 54 aa-1.56□□□□□ -2.66
VAM3YOR106W ATP17Q06405 101 aa-1.57□□□□□ -2.66
VAM3YOR106W YOR072W-BQ3E832 53 aa-1.57□□□□□ -2.66
VAM3YOR106W KOG1P38873 1557 aa-1.57□□□□□ -2.66
VAM3YOR106W YDR119W-AQ2V2P9 66 aa-1.58□□□□□ -2.66
VAM3YOR106W YDR524C-BQ3E6R4 66 aa-1.6□□□□□ -2.67
VAM3YOR106W RPS27BP38711 82 aa-1.61□□□□□ -2.67
VAM3YOR106W CWP2P43497 92 aa-1.62□□□□□ -2.67
VAM3YOR106W Q0017Q9ZZX8 53 aa-1.62□□□□□ -2.67
VAM3YOR106W COA2Q3E823 68 aa-1.63□□□□□ -2.67
VAM3YOR106W YBL039W-BP0C268 59 aa-1.64□□□□□ -2.67
VAM3YOR106W YOR011W-AQ3E807 68 aa-1.64□□□□□ -2.67
VAM3YOR106W YGL194C-AQ2V2P6 80 aa-1.65□□□□□ -2.67
VAM3YOR106W YOR032W-AQ8TGS1 66 aa-1.65□□□□□ -2.67
VAM3YOR106W YGR146C-AQ8TGT9 53 aa-1.65□□□□□ -2.67
VAM3YOR106W MLP1Q02455 1875 aaKnown RBP-1.65□□□□□ -2.67
VAM3YOR106W QCR9P22289 66 aa-1.66□□□□□ -2.68
VAM3YOR106W TY3B-GQ99315 1547 aa-1.66□□□□□ -2.68
VAM3YOR106W YGR121W-AQ3E816 71 aa-1.68□□□□□ -2.68
VAM3YOR106W VPS13Q07878 3144 aa-1.69□□□□□ -2.68
VAM3YOR106W MMS22Q06164 1454 aa-1.69□□□□□ -2.68
VAM3YOR106W YOR192C-CQ3E736 78 aa-1.71□□□□□ -2.68
VAM3YOR106W VPS15P22219 1454 aa-1.71□□□□□ -2.68
VAM3YOR106W SWM2P40342 146 aa-1.72□□□□□ -2.68
VAM3YOR106W HAP1P0CE41 1502 aa-1.72□□□□□ -2.69
VAM3YOR106W FIG2P25653 1609 aa-1.73□□□□□ -2.69
VAM3YOR106W YGR035W-AQ45U48 73 aa-1.73□□□□□ -2.69
VAM3YOR106W LTE1P07866 1435 aa-1.74□□□□□ -2.69
VAM3YOR106W YSP2Q06681 1438 aa-1.74□□□□□ -2.69
VAM3YOR106W YML054C-AQ3E809 52 aa-1.75□□□□□ -2.69
VAM3YOR106W ESC1Q03661 1658 aaKnown RBP-1.75□□□□□ -2.69
VAM3YOR106W SPI1P40092 148 aa-1.76□□□□□ -2.69
VAM3YOR106W PAU7P39545 55 aa-1.78□□□□□ -2.69
VAM3YOR106W YBR230W-AQ3E762 66 aa-1.79□□□□□ -2.7
VAM3YOR106W TIM12P32830 109 aa-1.8□□□□□ -2.7
VAM3YOR106W SSS1P35179 80 aa-1.8□□□□□ -2.7
VAM3YOR106W FKS3Q04952 1785 aa-1.82□□□□□ -2.7
VAM3YOR106W THO2P53552 1597 aaKnown RBP-1.82□□□□□ -2.7
VAM3YOR106W RPL29P05747 59 aaPredicted RBP-1.83□□□□□ -2.7
VAM3YOR106W YDR034C-AP0C289 58 aa-1.85□□□□□ -2.71
VAM3YOR106W HUB1Q6Q546 73 aa-1.87□□□□□ -2.71
VAM3YOR106W RPS30AP0CX33 63 aaKnown RBP-1.88□□□□□ -2.71
VAM3YOR106W RPS30BP0CX34 63 aaKnown RBP-1.88□□□□□ -2.71
VAM3YOR106W YMR105W-AQ8TGS8 64 aa-1.89□□□□□ -2.71
VAM3YOR106W SNQ2P32568 1501 aaKnown RBP-1.91□□□□□ -2.71
VAM3YOR106W YLR157W-DP0CE99 70 aa-1.91□□□□□ -2.72
VAM3YOR106W DNF1P32660 1571 aa-1.91□□□□□ -2.72
VAM3YOR106W ESP1Q03018 1630 aa-1.92□□□□□ -2.72
VAM3YOR106W ERI1P62651 68 aaKnown RBP-1.93□□□□□ -2.72
VAM3YOR106W YOL131WQ08270 108 aa-1.94□□□□□ -2.72
VAM3YOR106W YOR316C-AQ3E806 69 aa-1.94□□□□□ -2.72
VAM3YOR106W YHR073W-AP0C5N7 58 aa-1.97□□□□□ -2.72
VAM3YOR106W PDR15Q04182 1529 aaKnown RBP-1.97□□□□□ -2.73
VAM3YOR106W RPO31P04051 1460 aa-1.98□□□□□ -2.73
VAM3YOR106W FLO1P32768 1537 aa-1.98□□□□□ -2.73
VAM3YOR106W YOR093CQ12275 1648 aa-1.99□□□□□ -2.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms