RNA–Protein interactions for RNA: YKR008W

RSC4, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC4, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC4YKR008W YHR007C-AQ07074 71 aa5.62□□□□□ -1.51
RSC4YKR008W RPL33AP05744 107 aaKnown RBP5.61□□□□□ -1.51
RSC4YKR008W RPS30AP0CX33 63 aaKnown RBP5.61□□□□□ -1.51
RSC4YKR008W RPS30BP0CX34 63 aaKnown RBP5.61□□□□□ -1.51
RSC4YKR008W YNL042W-BQ3E7Z2 85 aa5.61□□□□□ -1.51
RSC4YKR008W RPS11AP0CX47 156 aaKnown RBP5.6□□□□□ -1.51
RSC4YKR008W RPS11BP0CX48 156 aaKnown RBP5.6□□□□□ -1.51
RSC4YKR008W YOR192C-CQ3E736 78 aa5.6□□□□□ -1.51
RSC4YKR008W LCL2Q08045 131 aa5.6□□□□□ -1.51
RSC4YKR008W YGL041C-BQ3E750 60 aa5.6□□□□□ -1.51
RSC4YKR008W YDR210WQ03482 75 aa5.58□□□□□ -1.52
RSC4YKR008W YDR114CQ04597 100 aa5.58□□□□□ -1.52
RSC4YKR008W YSF3P0C074 85 aaPredicted RBP5.57□□□□□ -1.52
RSC4YKR008W HUB1Q6Q546 73 aa5.57□□□□□ -1.52
RSC4YKR008W YOR034C-AQ3E735 80 aa5.56□□□□□ -1.52
RSC4YKR008W AGA2P32781 87 aa5.55□□□□□ -1.52
RSC4YKR008W YOL166W-AQ8TGJ1 51 aa5.54□□□□□ -1.52
RSC4YKR008W YBR219CP38317 127 aa5.54□□□□□ -1.52
RSC4YKR008W ATP17Q06405 101 aa5.53□□□□□ -1.52
RSC4YKR008W CCW12Q12127 133 aa5.53□□□□□ -1.52
RSC4YKR008W VAM10Q08474 114 aa5.52□□□□□ -1.53
RSC4YKR008W YCR001WP25347 104 aa5.51□□□□□ -1.53
RSC4YKR008W YNL190WP53872 204 aa5.5□□□□□ -1.53
RSC4YKR008W MRPS12P53732 153 aa5.49□□□□□ -1.53
RSC4YKR008W YJR146WP47174 117 aa5.49□□□□□ -1.53
RSC4YKR008W TAR1Q8TGM6 124 aa5.49□□□□□ -1.53
RSC4YKR008W YPR096CO13587 100 aa5.47□□□□□ -1.53
RSC4YKR008W BPH1P25356 2167 aa5.46□□□□□ -1.54
RSC4YKR008W CDC39P25655 2108 aaKnown RBP5.45□□□□□ -1.54
RSC4YKR008W YNL122CP53921 115 aaPredicted RBP5.45□□□□□ -1.54
RSC4YKR008W SGF11Q03067 99 aa5.45□□□□□ -1.54
RSC4YKR008W YGR240C-AQ3E786 66 aa5.43□□□□□ -1.54
RSC4YKR008W YMR122W-AQ3E842 84 aa5.42□□□□□ -1.54
RSC4YKR008W AQY2P0CD90 149 aa5.4□□□□□ -1.55
RSC4YKR008W RDS3Q06835 107 aaPredicted RBP5.39□□□□□ -1.55
RSC4YKR008W YBR201C-AQ2V2Q3 67 aa5.33□□□□□ -1.56
RSC4YKR008W YLR255CO13574 117 aa5.32□□□□□ -1.56
RSC4YKR008W MGR2Q02889 113 aa5.32□□□□□ -1.56
RSC4YKR008W YMR007WQ03675 126 aa5.32□□□□□ -1.56
RSC4YKR008W YOL097W-AQ3E7Y9 61 aa5.32□□□□□ -1.56
RSC4YKR008W YEL008WP40001 126 aa5.31□□□□□ -1.56
RSC4YKR008W ATP18P81450 59 aa5.3□□□□□ -1.56
RSC4YKR008W SDH6Q3E785 79 aa5.29□□□□□ -1.56
RSC4YKR008W YMR001C-AQ8TGS9 76 aa5.29□□□□□ -1.56
RSC4YKR008W SHU1P38751 150 aa5.28□□□□□ -1.56
RSC4YKR008W YLR157W-DP0CE99 70 aa5.27□□□□□ -1.57
RSC4YKR008W COA2Q3E823 68 aa5.27□□□□□ -1.57
RSC4YKR008W Q0032Q9ZZX7 96 aa5.27□□□□□ -1.57
RSC4YKR008W FIG2P25653 1609 aa5.27□□□□□ -1.57
RSC4YKR008W BRR2P32639 2163 aaKnown RBP5.26□□□□□ -1.57
RSC4YKR008W YJR107C-AP0CT86 78 aa5.26□□□□□ -1.57
RSC4YKR008W YIL086CP40503 102 aa5.26□□□□□ -1.57
RSC4YKR008W COX9P07255 59 aa5.24□□□□□ -1.57
RSC4YKR008W MVB12P42939 101 aa5.23□□□□□ -1.57
RSC4YKR008W YMR141CP40211 102 aa5.22□□□□□ -1.57
RSC4YKR008W YJL009WP47078 108 aa5.22□□□□□ -1.57
RSC4YKR008W YIL102CP40488 101 aa5.21□□□□□ -1.58
RSC4YKR008W RPL38P49167 78 aaKnown RBP5.2□□□□□ -1.58
RSC4YKR008W TOS6P48560 102 aa5.17□□□□□ -1.58
RSC4YKR008W YCL042WP25572 119 aa5.16□□□□□ -1.58
RSC4YKR008W HKR1P41809 1802 aa5.16□□□□□ -1.58
RSC4YKR008W YBL039W-BP0C268 59 aa5.14□□□□□ -1.59
RSC4YKR008W LCL1Q02786 101 aa5.14□□□□□ -1.59
RSC4YKR008W COX7P10174 60 aa5.13□□□□□ -1.59
RSC4YKR008W YNL146C-AQ3E7Z1 64 aa5.12□□□□□ -1.59
RSC4YKR008W YDL012CQ12489 107 aa5.11□□□□□ -1.59
RSC4YKR008W ACC1Q00955 2233 aaKnown RBP5.1□□□□□ -1.59
RSC4YKR008W YPR010C-AA5Z2X5 72 aa5.09□□□□□ -1.6
RSC4YKR008W YPR108W-AQ3E7B3 70 aa5.09□□□□□ -1.6
RSC4YKR008W YOR072WQ08486 104 aa5.05□□□□□ -1.6
RSC4YKR008W YOR011W-AQ3E807 68 aa5.05□□□□□ -1.6
RSC4YKR008W BLM10P43583 2143 aa5.04□□□□□ -1.6
RSC4YKR008W YBR200W-AQ3E755 54 aa5.03□□□□□ -1.6
RSC4YKR008W YOL013W-AP0C272 63 aaPredicted RBP5.02□□□□□ -1.61
RSC4YKR008W YGR025WP53216 100 aa5□□□□□ -1.61
RSC4YKR008W YFR009W-AP0C5M9 85 aa4.98□□□□□ -1.61
RSC4YKR008W YJR128WP47162 119 aa4.96□□□□□ -1.62
RSC4YKR008W HUG1Q6Q5K6 68 aa4.93□□□□□ -1.62
RSC4YKR008W YOR008C-AQ3E7B9 74 aa4.92□□□□□ -1.62
RSC4YKR008W TOM7P53507 60 aa4.9□□□□□ -1.62
RSC4YKR008W HUA1P40325 198 aa4.88□□□□□ -1.63
RSC4YKR008W YOR394C-AQ8TGJ0 55 aa4.88□□□□□ -1.63
RSC4YKR008W FAB1P34756 2278 aa4.87□□□□□ -1.63
RSC4YKR008W YBR230W-AQ3E762 66 aa4.84□□□□□ -1.63
RSC4YKR008W GIS2P53849 153 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
RSC4YKR008W YHR086W-AQ3E746 53 aa4.82□□□□□ -1.64
RSC4YKR008W YLR342W-AQ3E810 57 aa4.81□□□□□ -1.64
RSC4YKR008W OLI1P61829 76 aa4.81□□□□□ -1.64
RSC4YKR008W AUA1P32450 94 aa4.8□□□□□ -1.64
RSC4YKR008W YAR064WP39563 99 aa4.8□□□□□ -1.64
RSC4YKR008W BEM2P39960 2167 aaKnown RBP4.8□□□□□ -1.64
RSC4YKR008W RPC10P40422 70 aa4.79□□□□□ -1.64
RSC4YKR008W SEC16P48415 2195 aaKnown RBP4.77□□□□□ -1.65
RSC4YKR008W YHR212W-AP0CX91 67 aa4.77□□□□□ -1.65
RSC4YKR008W POL2P21951 2222 aaKnown RBP4.75□□□□□ -1.65
RSC4YKR008W SIP18P50263 79 aa4.73□□□□□ -1.65
RSC4YKR008W RPS27AP35997 82 aaKnown RBP4.71□□□□□ -1.66
RSC4YKR008W HHY1P39982 102 aa4.71□□□□□ -1.66
RSC4YKR008W YHR213W-BQ8TGK1 99 aa4.71□□□□□ -1.66
RSC4YKR008W YBR072C-AQ3E794 53 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms