RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W VTH2P40890 1549 aa1.7□□□□□ -2.14
NDC80YIL144W RPO21P04050 1733 aaKnown RBP1.7□□□□□ -2.14
NDC80YIL144W TY2B-LR1P0C2J3 1770 aa1.69□□□□□ -2.14
NDC80YIL144W TY2B-FP0CX63 1770 aa1.69□□□□□ -2.14
NDC80YIL144W TY2B-GR2P0CX64 1770 aa1.69□□□□□ -2.14
NDC80YIL144W URB1P34241 1764 aaKnown RBP1.69□□□□□ -2.14
NDC80YIL144W TY2B-DR2Q03494 1770 aa1.69□□□□□ -2.14
NDC80YIL144W TY2B-DR3Q07791 1770 aaKnown RBP1.69□□□□□ -2.14
NDC80YIL144W TY2B-OR1Q12113 1770 aa1.69□□□□□ -2.14
NDC80YIL144W TY2B-BQ12491 1770 aa1.69□□□□□ -2.14
NDC80YIL144W TY2B-OR2Q12501 1770 aa1.69□□□□□ -2.14
NDC80YIL144W MMS1Q06211 1407 aa1.69□□□□□ -2.14
NDC80YIL144W ATP18P81450 59 aa1.69□□□□□ -2.14
NDC80YIL144W FKS3Q04952 1785 aa1.69□□□□□ -2.14
NDC80YIL144W CDC25P04821 1589 aa1.68□□□□□ -2.14
NDC80YIL144W HFA1P32874 2273 aa1.68□□□□□ -2.14
NDC80YIL144W TY3B-GQ99315 1547 aa1.68□□□□□ -2.14
NDC80YIL144W TY4B-HP0C2J7 1802 aa1.68□□□□□ -2.14
NDC80YIL144W UTP10P42945 1769 aaKnown RBP1.68□□□□□ -2.14
NDC80YIL144W IML1P47170 1584 aa1.68□□□□□ -2.14
NDC80YIL144W MOT1P32333 1867 aa1.68□□□□□ -2.14
NDC80YIL144W SEC16P48415 2195 aaKnown RBP1.67□□□□□ -2.14
NDC80YIL144W SSK2P53599 1579 aa1.67□□□□□ -2.14
NDC80YIL144W ATP17Q06405 101 aa1.67□□□□□ -2.14
NDC80YIL144W HHY1P39982 102 aa1.67□□□□□ -2.14
NDC80YIL144W DNF2Q12675 1612 aa1.66□□□□□ -2.14
NDC80YIL144W BCK1Q01389 1478 aa1.66□□□□□ -2.14
NDC80YIL144W RPS30AP0CX33 63 aaKnown RBP1.65□□□□□ -2.14
NDC80YIL144W RPS30BP0CX34 63 aaKnown RBP1.65□□□□□ -2.14
NDC80YIL144W YIL102CP40488 101 aa1.65□□□□□ -2.14
NDC80YIL144W EDC1P53080 175 aaPredicted RBP1.65□□□□□ -2.14
NDC80YIL144W YKL023C-AQ2V2P3 75 aa1.65□□□□□ -2.14
NDC80YIL144W COX7P10174 60 aa1.64□□□□□ -2.15
NDC80YIL144W SDH6Q3E785 79 aa1.64□□□□□ -2.15
NDC80YIL144W YDR182W-AQ3E796 67 aa1.64□□□□□ -2.15
NDC80YIL144W POL2P21951 2222 aaKnown RBP1.63□□□□□ -2.15
NDC80YIL144W YOL097W-AQ3E7Y9 61 aa1.63□□□□□ -2.15
NDC80YIL144W DNF3Q12674 1656 aa1.63□□□□□ -2.15
NDC80YIL144W APC1P53886 1748 aa1.63□□□□□ -2.15
NDC80YIL144W ARO1P08566 1588 aaKnown RBP1.62□□□□□ -2.15
NDC80YIL144W RPC10P40422 70 aa1.61□□□□□ -2.15
NDC80YIL144W YOR192C-CQ3E736 78 aa1.61□□□□□ -2.15
NDC80YIL144W HUB1Q6Q546 73 aa1.61□□□□□ -2.15
NDC80YIL144W PEP1P32319 1579 aa1.61□□□□□ -2.15
NDC80YIL144W YMR141CP40211 102 aa1.6□□□□□ -2.15
NDC80YIL144W IRC20Q06554 1556 aa1.6□□□□□ -2.15
NDC80YIL144W AUA1P32450 94 aa1.6□□□□□ -2.15
NDC80YIL144W YPR108W-AQ3E7B3 70 aa1.6□□□□□ -2.15
NDC80YIL144W YOL166W-AQ8TGJ1 51 aa1.6□□□□□ -2.15
NDC80YIL144W YHR213W-BQ8TGK1 99 aa1.6□□□□□ -2.15
NDC80YIL144W BLM10P43583 2143 aa1.59□□□□□ -2.15
NDC80YIL144W RIM15P43565 1770 aa1.59□□□□□ -2.16
NDC80YIL144W HUA1P40325 198 aa1.59□□□□□ -2.16
NDC80YIL144W SPO14P36126 1683 aa1.58□□□□□ -2.16
NDC80YIL144W RPL38P49167 78 aaKnown RBP1.57□□□□□ -2.16
NDC80YIL144W YBR072C-AQ3E794 53 aa1.57□□□□□ -2.16
NDC80YIL144W YLR146W-AQ2V2P1 62 aa1.57□□□□□ -2.16
NDC80YIL144W YJR107C-AP0CT86 78 aa1.55□□□□□ -2.16
NDC80YIL144W ULS1Q08562 1619 aa1.55□□□□□ -2.16
NDC80YIL144W URA2P07259 2214 aaKnown RBP1.55□□□□□ -2.16
NDC80YIL144W YBT1P32386 1661 aa1.54□□□□□ -2.16
NDC80YIL144W YOR093CQ12275 1648 aa1.54□□□□□ -2.16
NDC80YIL144W YBL039W-BP0C268 59 aa1.53□□□□□ -2.16
NDC80YIL144W YBR032WP38223 100 aa1.53□□□□□ -2.16
NDC80YIL144W YBR200W-AQ3E755 54 aa1.52□□□□□ -2.17
NDC80YIL144W YMR001C-AQ8TGS9 76 aa1.52□□□□□ -2.17
NDC80YIL144W VMR1P38735 1592 aa1.51□□□□□ -2.17
NDC80YIL144W PDR15Q04182 1529 aaKnown RBP1.51□□□□□ -2.17
NDC80YIL144W YLR157W-DP0CE99 70 aa1.5□□□□□ -2.17
NDC80YIL144W NUP188P52593 1655 aaKnown RBP1.49□□□□□ -2.17
NDC80YIL144W STU1P38198 1513 aa1.49□□□□□ -2.17
NDC80YIL144W RPL43AP0CX25 92 aaKnown RBP1.49□□□□□ -2.17
NDC80YIL144W RPL43BP0CX26 92 aa1.49□□□□□ -2.17
NDC80YIL144W YOR011W-AQ3E807 68 aa1.48□□□□□ -2.17
NDC80YIL144W NUP170P38181 1502 aa1.48□□□□□ -2.17
NDC80YIL144W YOR394C-AQ8TGJ0 55 aa1.46□□□□□ -2.18
NDC80YIL144W USO1P25386 1790 aa1.45□□□□□ -2.18
NDC80YIL144W RPS27AP35997 82 aaKnown RBP1.44□□□□□ -2.18
NDC80YIL144W YLR307C-AQ3E825 87 aa1.44□□□□□ -2.18
NDC80YIL144W YLR157W-EP0CF00 54 aa1.44□□□□□ -2.18
NDC80YIL144W SMX2P40204 77 aaKnown RBP1.44□□□□□ -2.18
NDC80YIL144W YOL164W-AQ3E7A5 60 aa1.44□□□□□ -2.18
NDC80YIL144W THO2P53552 1597 aaKnown RBP1.44□□□□□ -2.18
NDC80YIL144W RPL37AP49166 88 aaKnown RBP1.43□□□□□ -2.18
NDC80YIL144W SNF2P22082 1703 aa1.42□□□□□ -2.18
NDC80YIL144W KOG1P38873 1557 aa1.41□□□□□ -2.18
NDC80YIL144W HKR1P41809 1802 aa1.4□□□□□ -2.19
NDC80YIL144W OLI1P61829 76 aa1.39□□□□□ -2.19
NDC80YIL144W RKR1Q04781 1562 aa1.39□□□□□ -2.19
NDC80YIL144W YGR025WP53216 100 aa1.38□□□□□ -2.19
NDC80YIL144W NUP192P47054 1683 aa1.37□□□□□ -2.19
NDC80YIL144W YFR009W-AP0C5M9 85 aa1.36□□□□□ -2.19
NDC80YIL144W YBR016WP38216 128 aa1.36□□□□□ -2.19
NDC80YIL144W YPR010C-AA5Z2X5 72 aa1.35□□□□□ -2.19
NDC80YIL144W YBR230W-AQ3E762 66 aa1.33□□□□□ -2.2
NDC80YIL144W MLP2P40457 1679 aa1.33□□□□□ -2.2
NDC80YIL144W CHC1P22137 1653 aaKnown RBP1.32□□□□□ -2.2
NDC80YIL144W RPS27BP38711 82 aa1.31□□□□□ -2.2
NDC80YIL144W YBL044WP38194 122 aa1.31□□□□□ -2.2
NDC80YIL144W RPL37BP51402 88 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms