RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W YOR032W-AQ8TGS1 66 aa3.22□□□□□ -1.89
SPC97YHR172W STT4P37297 1900 aa3.22□□□□□ -1.89
SPC97YHR172W YKL018C-AQ3E7A7 99 aa3.21□□□□□ -1.89
SPC97YHR172W MOT1P32333 1867 aa3.21□□□□□ -1.9
SPC97YHR172W YNL122CP53921 115 aaPredicted RBP3.2□□□□□ -1.9
SPC97YHR172W YIL086CP40503 102 aa3.2□□□□□ -1.9
SPC97YHR172W YMR122W-AQ3E842 84 aa3.2□□□□□ -1.9
SPC97YHR172W YMR007WQ03675 126 aa3.19□□□□□ -1.9
SPC97YHR172W YDR182W-AQ3E796 67 aa3.19□□□□□ -1.9
SPC97YHR172W ARO1P08566 1588 aaKnown RBP3.19□□□□□ -1.9
SPC97YHR172W LCL1Q02786 101 aa3.18□□□□□ -1.9
SPC97YHR172W THO2P53552 1597 aaKnown RBP3.18□□□□□ -1.9
SPC97YHR172W MLP2P40457 1679 aa3.18□□□□□ -1.9
SPC97YHR172W SHU1P38751 150 aa3.17□□□□□ -1.9
SPC97YHR172W SGF11Q03067 99 aa3.17□□□□□ -1.9
SPC97YHR172W NUP188P52593 1655 aaKnown RBP3.16□□□□□ -1.9
SPC97YHR172W ATP17Q06405 101 aa3.16□□□□□ -1.9
SPC97YHR172W YBR201C-AQ2V2Q3 67 aa3.16□□□□□ -1.9
SPC97YHR172W YOR034C-AQ3E735 80 aa3.16□□□□□ -1.9
SPC97YHR172W MGR2Q02889 113 aa3.16□□□□□ -1.9
SPC97YHR172W SLH1P53327 1967 aaKnown RBP3.15□□□□□ -1.91
SPC97YHR172W YOR093CQ12275 1648 aa3.15□□□□□ -1.91
SPC97YHR172W SMX2P40204 77 aaKnown RBP3.15□□□□□ -1.91
SPC97YHR172W RPS30AP0CX33 63 aaKnown RBP3.14□□□□□ -1.91
SPC97YHR172W RPS30BP0CX34 63 aaKnown RBP3.14□□□□□ -1.91
SPC97YHR172W YNL190WP53872 204 aa3.14□□□□□ -1.91
SPC97YHR172W YCR001WP25347 104 aa3.13□□□□□ -1.91
SPC97YHR172W YOR072WQ08486 104 aa3.13□□□□□ -1.91
SPC97YHR172W Q0032Q9ZZX7 96 aa3.13□□□□□ -1.91
SPC97YHR172W BRR2P32639 2163 aaKnown RBP3.13□□□□□ -1.91
SPC97YHR172W YDL012CQ12489 107 aa3.13□□□□□ -1.91
SPC97YHR172W HUB1Q6Q546 73 aa3.12□□□□□ -1.91
SPC97YHR172W CHC1P22137 1653 aaKnown RBP3.12□□□□□ -1.91
SPC97YHR172W EDC1P53080 175 aaPredicted RBP3.12□□□□□ -1.91
SPC97YHR172W ATP18P81450 59 aa3.11□□□□□ -1.91
SPC97YHR172W ACC1Q00955 2233 aaKnown RBP3.11□□□□□ -1.91
SPC97YHR172W URB1P34241 1764 aaKnown RBP3.11□□□□□ -1.91
SPC97YHR172W YHR212W-AP0CX91 67 aa3.1□□□□□ -1.91
SPC97YHR172W MVB12P42939 101 aa3.1□□□□□ -1.91
SPC97YHR172W YOL097W-AQ3E7Y9 61 aa3.09□□□□□ -1.91
SPC97YHR172W RKR1Q04781 1562 aa3.09□□□□□ -1.91
SPC97YHR172W HUG1Q6Q5K6 68 aa3.09□□□□□ -1.92
SPC97YHR172W VMR1P38735 1592 aa3.08□□□□□ -1.92
SPC97YHR172W BPH1P25356 2167 aa3.08□□□□□ -1.92
SPC97YHR172W DNF3Q12674 1656 aa3.07□□□□□ -1.92
SPC97YHR172W YAR064WP39563 99 aa3.07□□□□□ -1.92
SPC97YHR172W SDH6Q3E785 79 aa3.07□□□□□ -1.92
SPC97YHR172W YOL166W-AQ8TGJ1 51 aa3.07□□□□□ -1.92
SPC97YHR172W YOL013W-AP0C272 63 aaPredicted RBP3.05□□□□□ -1.92
SPC97YHR172W COX7P10174 60 aa3.04□□□□□ -1.92
SPC97YHR172W YOR192C-CQ3E736 78 aa3.04□□□□□ -1.92
SPC97YHR172W KOG1P38873 1557 aa3.04□□□□□ -1.92
SPC97YHR172W YJR128WP47162 119 aa3.03□□□□□ -1.92
SPC97YHR172W YMR141CP40211 102 aa3.02□□□□□ -1.93
SPC97YHR172W PDR15Q04182 1529 aaKnown RBP3.01□□□□□ -1.93
SPC97YHR172W YPR108W-AQ3E7B3 70 aa2.97□□□□□ -1.93
SPC97YHR172W YLR146W-AQ2V2P1 62 aa2.96□□□□□ -1.94
SPC97YHR172W YJR107C-AP0CT86 78 aa2.95□□□□□ -1.94
SPC97YHR172W NUP192P47054 1683 aa2.94□□□□□ -1.94
SPC97YHR172W SNF2P22082 1703 aa2.94□□□□□ -1.94
SPC97YHR172W YIL102CP40488 101 aa2.94□□□□□ -1.94
SPC97YHR172W HHY1P39982 102 aa2.93□□□□□ -1.94
SPC97YHR172W RPL38P49167 78 aaKnown RBP2.92□□□□□ -1.94
SPC97YHR172W YMR001C-AQ8TGS9 76 aa2.92□□□□□ -1.94
SPC97YHR172W SEC16P48415 2195 aaKnown RBP2.91□□□□□ -1.94
SPC97YHR172W YLR157W-DP0CE99 70 aa2.91□□□□□ -1.94
SPC97YHR172W YBL039W-BP0C268 59 aa2.91□□□□□ -1.94
SPC97YHR172W YBR032WP38223 100 aa2.89□□□□□ -1.95
SPC97YHR172W GIS2P53849 153 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SPC97YHR172W FAB1P34756 2278 aa2.88□□□□□ -1.95
SPC97YHR172W BLM10P43583 2143 aa2.88□□□□□ -1.95
SPC97YHR172W RPC10P40422 70 aa2.87□□□□□ -1.95
SPC97YHR172W YBR072C-AQ3E794 53 aa2.87□□□□□ -1.95
SPC97YHR172W YBR200W-AQ3E755 54 aa2.85□□□□□ -1.95
SPC97YHR172W HIR3P47171 1648 aa2.85□□□□□ -1.95
SPC97YHR172W YOR011W-AQ3E807 68 aa2.84□□□□□ -1.95
SPC97YHR172W POL2P21951 2222 aaKnown RBP2.84□□□□□ -1.95
SPC97YHR172W YHR213W-BQ8TGK1 99 aa2.83□□□□□ -1.96
SPC97YHR172W ATG2P53855 1592 aa2.83□□□□□ -1.96
SPC97YHR172W BEM2P39960 2167 aaKnown RBP2.79□□□□□ -1.96
SPC97YHR172W HFA1P32874 2273 aa2.79□□□□□ -1.96
SPC97YHR172W YOR394C-AQ8TGJ0 55 aa2.77□□□□□ -1.97
SPC97YHR172W AUA1P32450 94 aa2.75□□□□□ -1.97
SPC97YHR172W YGR025WP53216 100 aa2.74□□□□□ -1.97
SPC97YHR172W BUD3P25558 1636 aa2.73□□□□□ -1.97
SPC97YHR172W GCN2P15442 1659 aa2.73□□□□□ -1.97
SPC97YHR172W OLI1P61829 76 aa2.73□□□□□ -1.97
SPC97YHR172W YPR010C-AA5Z2X5 72 aa2.7□□□□□ -1.98
SPC97YHR172W HUA1P40325 198 aa2.7□□□□□ -1.98
SPC97YHR172W RPS27AP35997 82 aaKnown RBP2.69□□□□□ -1.98
SPC97YHR172W FIG2P25653 1609 aa2.68□□□□□ -1.98
SPC97YHR172W HKR1P41809 1802 aa2.67□□□□□ -1.98
SPC97YHR172W YBR230W-AQ3E762 66 aa2.66□□□□□ -1.98
SPC97YHR172W RPL43AP0CX25 92 aaKnown RBP2.63□□□□□ -1.99
SPC97YHR172W RPL43BP0CX26 92 aa2.63□□□□□ -1.99
SPC97YHR172W TOS6P48560 102 aa2.63□□□□□ -1.99
SPC97YHR172W URA2P07259 2214 aaKnown RBP2.57□□□□□ -2
SPC97YHR172W YFR009W-AP0C5M9 85 aa2.56□□□□□ -2
SPC97YHR172W YOL164W-AQ3E7A5 60 aa2.53□□□□□ -2
SPC97YHR172W RPS27BP38711 82 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms