RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W RIM15P43565 1770 aa1.6□□□□□ -2.15
CTM1YHR109W YLR255CO13574 117 aa1.59□□□□□ -2.15
CTM1YHR109W YOR072WQ08486 104 aa1.59□□□□□ -2.15
CTM1YHR109W YDL022C-AP0C5L6 82 aa1.59□□□□□ -2.16
CTM1YHR109W RPS11AP0CX47 156 aaKnown RBP1.59□□□□□ -2.16
CTM1YHR109W RPS11BP0CX48 156 aaKnown RBP1.59□□□□□ -2.16
CTM1YHR109W YSY6P38374 65 aa1.59□□□□□ -2.16
CTM1YHR109W RPL37AP49166 88 aaKnown RBP1.59□□□□□ -2.16
CTM1YHR109W YGL041C-BQ3E750 60 aa1.59□□□□□ -2.16
CTM1YHR109W USO1P25386 1790 aa1.58□□□□□ -2.16
CTM1YHR109W SPI1P40092 148 aa1.58□□□□□ -2.16
CTM1YHR109W STU1P38198 1513 aa1.58□□□□□ -2.16
CTM1YHR109W BLM10P43583 2143 aa1.58□□□□□ -2.16
CTM1YHR109W YBT1P32386 1661 aa1.57□□□□□ -2.16
CTM1YHR109W YOR032W-AQ8TGS1 66 aa1.57□□□□□ -2.16
CTM1YHR109W NTE1Q04958 1679 aa1.57□□□□□ -2.16
CTM1YHR109W AIM19P40502 157 aa1.57□□□□□ -2.16
CTM1YHR109W YGR240C-AQ3E786 66 aa1.57□□□□□ -2.16
CTM1YHR109W YKL018C-AQ3E7A7 99 aa1.57□□□□□ -2.16
CTM1YHR109W POL2P21951 2222 aaKnown RBP1.56□□□□□ -2.16
CTM1YHR109W HFA1P32874 2273 aa1.56□□□□□ -2.16
CTM1YHR109W DNF2Q12675 1612 aa1.56□□□□□ -2.16
CTM1YHR109W URB1P34241 1764 aaKnown RBP1.56□□□□□ -2.16
CTM1YHR109W YOR034C-AQ3E735 80 aa1.55□□□□□ -2.16
CTM1YHR109W YOR093CQ12275 1648 aa1.55□□□□□ -2.16
CTM1YHR109W IML1P47170 1584 aa1.55□□□□□ -2.16
CTM1YHR109W YKL023C-AQ2V2P3 75 aa1.54□□□□□ -2.16
CTM1YHR109W YNL042W-BQ3E7Z2 85 aa1.54□□□□□ -2.16
CTM1YHR109W PAU7P39545 55 aa1.54□□□□□ -2.16
CTM1YHR109W HHY1P39982 102 aa1.54□□□□□ -2.16
CTM1YHR109W EDC1P53080 175 aaPredicted RBP1.54□□□□□ -2.16
CTM1YHR109W LCL1Q02786 101 aa1.54□□□□□ -2.16
CTM1YHR109W HUG1Q6Q5K6 68 aa1.54□□□□□ -2.16
CTM1YHR109W SEC16P48415 2195 aaKnown RBP1.53□□□□□ -2.16
CTM1YHR109W YNL190WP53872 204 aa1.53□□□□□ -2.16
CTM1YHR109W YMR122W-AQ3E842 84 aa1.53□□□□□ -2.16
CTM1YHR109W ARO1P08566 1588 aaKnown RBP1.53□□□□□ -2.16
CTM1YHR109W NUP188P52593 1655 aaKnown RBP1.53□□□□□ -2.17
CTM1YHR109W SMX2P40204 77 aaKnown RBP1.52□□□□□ -2.17
CTM1YHR109W YOR192C-CQ3E736 78 aa1.52□□□□□ -2.17
CTM1YHR109W MLP2P40457 1679 aa1.52□□□□□ -2.17
CTM1YHR109W CHC1P22137 1653 aaKnown RBP1.51□□□□□ -2.17
CTM1YHR109W RPS30AP0CX33 63 aaKnown RBP1.5□□□□□ -2.17
CTM1YHR109W RPS30BP0CX34 63 aaKnown RBP1.5□□□□□ -2.17
CTM1YHR109W MVB12P42939 101 aa1.5□□□□□ -2.17
CTM1YHR109W YBR201C-AQ2V2Q3 67 aa1.5□□□□□ -2.17
CTM1YHR109W SHU1P38751 150 aa1.49□□□□□ -2.17
CTM1YHR109W YHR213W-BQ8TGK1 99 aa1.49□□□□□ -2.17
CTM1YHR109W YIL086CP40503 102 aa1.49□□□□□ -2.17
CTM1YHR109W SGF11Q03067 99 aa1.49□□□□□ -2.17
CTM1YHR109W Q0032Q9ZZX7 96 aa1.49□□□□□ -2.17
CTM1YHR109W KOG1P38873 1557 aa1.48□□□□□ -2.17
CTM1YHR109W THO2P53552 1597 aaKnown RBP1.48□□□□□ -2.17
CTM1YHR109W YOL166W-AQ8TGJ1 51 aa1.48□□□□□ -2.17
CTM1YHR109W DNF3Q12674 1656 aa1.48□□□□□ -2.17
CTM1YHR109W YDR182W-AQ3E796 67 aa1.47□□□□□ -2.17
CTM1YHR109W URA2P07259 2214 aaKnown RBP1.47□□□□□ -2.17
CTM1YHR109W RKR1Q04781 1562 aa1.47□□□□□ -2.17
CTM1YHR109W ATP17Q06405 101 aa1.47□□□□□ -2.17
CTM1YHR109W ATP18P81450 59 aa1.46□□□□□ -2.18
CTM1YHR109W SNF2P22082 1703 aa1.45□□□□□ -2.18
CTM1YHR109W YMR141CP40211 102 aa1.45□□□□□ -2.18
CTM1YHR109W VMR1P38735 1592 aa1.44□□□□□ -2.18
CTM1YHR109W RPL37BP51402 88 aaKnown RBP1.43□□□□□ -2.18
CTM1YHR109W PDR15Q04182 1529 aaKnown RBP1.42□□□□□ -2.18
CTM1YHR109W YJR128WP47162 119 aa1.42□□□□□ -2.18
CTM1YHR109W SDH6Q3E785 79 aa1.42□□□□□ -2.18
CTM1YHR109W HUB1Q6Q546 73 aa1.42□□□□□ -2.18
CTM1YHR109W NUP192P47054 1683 aa1.41□□□□□ -2.18
CTM1YHR109W COX7P10174 60 aa1.39□□□□□ -2.19
CTM1YHR109W YOL097W-AQ3E7Y9 61 aa1.39□□□□□ -2.19
CTM1YHR109W YPR108W-AQ3E7B3 70 aa1.38□□□□□ -2.19
CTM1YHR109W RPC10P40422 70 aa1.37□□□□□ -2.19
CTM1YHR109W YLR146W-AQ2V2P1 62 aa1.37□□□□□ -2.19
CTM1YHR109W YMR001C-AQ8TGS9 76 aa1.37□□□□□ -2.19
CTM1YHR109W YBL039W-BP0C268 59 aa1.36□□□□□ -2.19
CTM1YHR109W YLR157W-DP0CE99 70 aa1.36□□□□□ -2.19
CTM1YHR109W YJR107C-AP0CT86 78 aa1.36□□□□□ -2.19
CTM1YHR109W YBR032WP38223 100 aa1.36□□□□□ -2.19
CTM1YHR109W HIR3P47171 1648 aa1.36□□□□□ -2.19
CTM1YHR109W ATG2P53855 1592 aa1.35□□□□□ -2.19
CTM1YHR109W AUA1P32450 94 aa1.35□□□□□ -2.19
CTM1YHR109W YBR200W-AQ3E755 54 aa1.34□□□□□ -2.19
CTM1YHR109W RPL43AP0CX25 92 aaKnown RBP1.34□□□□□ -2.2
CTM1YHR109W RPL43BP0CX26 92 aa1.34□□□□□ -2.2
CTM1YHR109W RPL38P49167 78 aaKnown RBP1.32□□□□□ -2.2
CTM1YHR109W FIG2P25653 1609 aa1.32□□□□□ -2.2
CTM1YHR109W YOR011W-AQ3E807 68 aa1.31□□□□□ -2.2
CTM1YHR109W YLR307C-AQ3E825 87 aa1.31□□□□□ -2.2
CTM1YHR109W YBR072C-AQ3E794 53 aa1.3□□□□□ -2.2
CTM1YHR109W HKR1P41809 1802 aa1.3□□□□□ -2.2
CTM1YHR109W RPS27AP35997 82 aaKnown RBP1.29□□□□□ -2.2
CTM1YHR109W GCN2P15442 1659 aa1.29□□□□□ -2.2
CTM1YHR109W YLR157W-EP0CF00 54 aa1.29□□□□□ -2.2
CTM1YHR109W YOR394C-AQ8TGJ0 55 aa1.29□□□□□ -2.2
CTM1YHR109W SEN1Q00416 2231 aaKnown RBP1.28□□□□□ -2.2
CTM1YHR109W BUD3P25558 1636 aa1.27□□□□□ -2.21
CTM1YHR109W YPR010C-AA5Z2X5 72 aa1.27□□□□□ -2.21
CTM1YHR109W YGR025WP53216 100 aa1.24□□□□□ -2.21
CTM1YHR109W YFR009W-AP0C5M9 85 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms