RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W MMS1Q06211 1407 aa1.51□□□□□ -2.17
PRP18YGR006W YAR064WP39563 99 aa1.51□□□□□ -2.17
PRP18YGR006W YIL086CP40503 102 aa1.51□□□□□ -2.17
PRP18YGR006W PAU20Q08322 120 aa1.51□□□□□ -2.17
PRP18YGR006W VMA9Q3E7B6 73 aa1.51□□□□□ -2.17
PRP18YGR006W YIL134C-AQ45U18 67 aa1.51□□□□□ -2.17
PRP18YGR006W SPI1P40092 148 aa1.5□□□□□ -2.17
PRP18YGR006W VMR1P38735 1592 aa1.5□□□□□ -2.17
PRP18YGR006W USO1P25386 1790 aa1.49□□□□□ -2.17
PRP18YGR006W YOL013W-AP0C272 63 aaPredicted RBP1.49□□□□□ -2.17
PRP18YGR006W FPR2P32472 135 aa1.49□□□□□ -2.17
PRP18YGR006W LCL1Q02786 101 aa1.49□□□□□ -2.17
PRP18YGR006W MGR2Q02889 113 aa1.49□□□□□ -2.17
PRP18YGR006W YIL102C-AQ2V2P5 75 aa1.49□□□□□ -2.17
PRP18YGR006W YDL022C-AP0C5L6 82 aa1.48□□□□□ -2.17
PRP18YGR006W PEP1P32319 1579 aa1.47□□□□□ -2.17
PRP18YGR006W YCR001WP25347 104 aa1.47□□□□□ -2.17
PRP18YGR006W SHU1P38751 150 aa1.47□□□□□ -2.17
PRP18YGR006W YDR246W-AQ3E763 66 aa1.47□□□□□ -2.17
PRP18YGR006W HUG1Q6Q5K6 68 aa1.47□□□□□ -2.17
PRP18YGR006W ERI1P62651 68 aaKnown RBP1.46□□□□□ -2.18
PRP18YGR006W YNL042W-BQ3E7Z2 85 aa1.46□□□□□ -2.18
PRP18YGR006W YMR122W-AQ3E842 84 aa1.46□□□□□ -2.18
PRP18YGR006W YOR093CQ12275 1648 aa1.45□□□□□ -2.18
PRP18YGR006W YSY6P38374 65 aa1.45□□□□□ -2.18
PRP18YGR006W SNF2P22082 1703 aa1.45□□□□□ -2.18
PRP18YGR006W YIL102CP40488 101 aa1.44□□□□□ -2.18
PRP18YGR006W MVB12P42939 101 aa1.44□□□□□ -2.18
PRP18YGR006W BRR2P32639 2163 aaKnown RBP1.43□□□□□ -2.18
PRP18YGR006W PAU7P39545 55 aa1.43□□□□□ -2.18
PRP18YGR006W YJR128WP47162 119 aa1.43□□□□□ -2.18
PRP18YGR006W YOR032W-AQ8TGS1 66 aa1.43□□□□□ -2.18
PRP18YGR006W Q0032Q9ZZX7 96 aa1.43□□□□□ -2.18
PRP18YGR006W THO2P53552 1597 aaKnown RBP1.42□□□□□ -2.18
PRP18YGR006W RPL37BP51402 88 aaKnown RBP1.42□□□□□ -2.18
PRP18YGR006W YBR201C-AQ2V2Q3 67 aa1.42□□□□□ -2.18
PRP18YGR006W SEC16P48415 2195 aaKnown RBP1.41□□□□□ -2.18
PRP18YGR006W SGF11Q03067 99 aa1.41□□□□□ -2.18
PRP18YGR006W YKL023C-AQ2V2P3 75 aa1.41□□□□□ -2.18
PRP18YGR006W COX7P10174 60 aa1.4□□□□□ -2.19
PRP18YGR006W ATP18P81450 59 aa1.4□□□□□ -2.19
PRP18YGR006W ATP17Q06405 101 aa1.4□□□□□ -2.19
PRP18YGR006W YKL018C-AQ3E7A7 99 aa1.39□□□□□ -2.19
PRP18YGR006W STU1P38198 1513 aa1.39□□□□□ -2.19
PRP18YGR006W MLP2P40457 1679 aa1.39□□□□□ -2.19
PRP18YGR006W YOR034C-AQ3E735 80 aa1.38□□□□□ -2.19
PRP18YGR006W HHY1P39982 102 aa1.37□□□□□ -2.19
PRP18YGR006W YDR182W-AQ3E796 67 aa1.37□□□□□ -2.19
PRP18YGR006W YOL097W-AQ3E7Y9 61 aa1.37□□□□□ -2.19
PRP18YGR006W YHR213W-BQ8TGK1 99 aa1.37□□□□□ -2.19
PRP18YGR006W KOG1P38873 1557 aa1.36□□□□□ -2.19
PRP18YGR006W YMR141CP40211 102 aa1.36□□□□□ -2.19
PRP18YGR006W YNL190WP53872 204 aa1.36□□□□□ -2.19
PRP18YGR006W NUP192P47054 1683 aa1.35□□□□□ -2.19
PRP18YGR006W HKR1P41809 1802 aa1.35□□□□□ -2.19
PRP18YGR006W RPS30AP0CX33 63 aaKnown RBP1.34□□□□□ -2.19
PRP18YGR006W RPS30BP0CX34 63 aaKnown RBP1.34□□□□□ -2.19
PRP18YGR006W EDC1P53080 175 aaPredicted RBP1.34□□□□□ -2.19
PRP18YGR006W RKR1Q04781 1562 aa1.34□□□□□ -2.2
PRP18YGR006W POL2P21951 2222 aaKnown RBP1.34□□□□□ -2.2
PRP18YGR006W CHC1P22137 1653 aaKnown RBP1.33□□□□□ -2.2
PRP18YGR006W SDH6Q3E785 79 aa1.33□□□□□ -2.2
PRP18YGR006W YBR072C-AQ3E794 53 aa1.33□□□□□ -2.2
PRP18YGR006W HUB1Q6Q546 73 aa1.33□□□□□ -2.2
PRP18YGR006W RPL38P49167 78 aaKnown RBP1.32□□□□□ -2.2
PRP18YGR006W YOL166W-AQ8TGJ1 51 aa1.32□□□□□ -2.2
PRP18YGR006W PDR15Q04182 1529 aaKnown RBP1.31□□□□□ -2.2
PRP18YGR006W HIR3P47171 1648 aa1.31□□□□□ -2.2
PRP18YGR006W YPR108W-AQ3E7B3 70 aa1.31□□□□□ -2.2
PRP18YGR006W HFA1P32874 2273 aa1.31□□□□□ -2.2
PRP18YGR006W NUP170P38181 1502 aa1.3□□□□□ -2.2
PRP18YGR006W AUA1P32450 94 aa1.3□□□□□ -2.2
PRP18YGR006W RPC10P40422 70 aa1.29□□□□□ -2.2
PRP18YGR006W BUD3P25558 1636 aa1.29□□□□□ -2.2
PRP18YGR006W BLM10P43583 2143 aa1.28□□□□□ -2.2
PRP18YGR006W RPL43AP0CX25 92 aaKnown RBP1.28□□□□□ -2.2
PRP18YGR006W RPL43BP0CX26 92 aa1.28□□□□□ -2.2
PRP18YGR006W BPH1P25356 2167 aa1.27□□□□□ -2.21
PRP18YGR006W YBR032WP38223 100 aa1.27□□□□□ -2.21
PRP18YGR006W YBL039W-BP0C268 59 aa1.25□□□□□ -2.21
PRP18YGR006W YOR192C-CQ3E736 78 aa1.25□□□□□ -2.21
PRP18YGR006W YJR107C-AP0CT86 78 aa1.24□□□□□ -2.21
PRP18YGR006W YLR146W-AQ2V2P1 62 aa1.24□□□□□ -2.21
PRP18YGR006W YBR200W-AQ3E755 54 aa1.23□□□□□ -2.21
PRP18YGR006W YMR001C-AQ8TGS9 76 aa1.23□□□□□ -2.21
PRP18YGR006W ATG2P53855 1592 aa1.22□□□□□ -2.21
PRP18YGR006W YLR157W-DP0CE99 70 aa1.22□□□□□ -2.21
PRP18YGR006W YOR011W-AQ3E807 68 aa1.22□□□□□ -2.21
PRP18YGR006W GCN2P15442 1659 aa1.21□□□□□ -2.22
PRP18YGR006W FIG2P25653 1609 aa1.2□□□□□ -2.22
PRP18YGR006W RPS27AP35997 82 aaKnown RBP1.2□□□□□ -2.22
PRP18YGR006W YOR394C-AQ8TGJ0 55 aa1.2□□□□□ -2.22
PRP18YGR006W YLR157W-EP0CF00 54 aa1.19□□□□□ -2.22
PRP18YGR006W YLR307C-AQ3E825 87 aa1.19□□□□□ -2.22
PRP18YGR006W URA2P07259 2214 aaKnown RBP1.17□□□□□ -2.22
PRP18YGR006W OLI1P61829 76 aa1.17□□□□□ -2.22
PRP18YGR006W YOL164W-AQ3E7A5 60 aa1.15□□□□□ -2.23
PRP18YGR006W YBR016WP38216 128 aa1.13□□□□□ -2.23
PRP18YGR006W YGR025WP53216 100 aa1.13□□□□□ -2.23
PRP18YGR006W SMX2P40204 77 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms