RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W RPS20P38701 121 aaKnown RBP-0.6□□□□□ -2.51
CSE1YGL238W ICS3P47034 131 aa-0.6□□□□□ -2.51
CSE1YGL238W RSM19P53733 91 aaPredicted RBP-0.6□□□□□ -2.51
CSE1YGL238W SYM1Q06563 197 aa-0.6□□□□□ -2.51
CSE1YGL238W PAU23Q07987 124 aa-0.6□□□□□ -2.51
CSE1YGL238W YOR394C-AQ8TGJ0 55 aa-0.6□□□□□ -2.51
CSE1YGL238W ARG80P07249 177 aa-0.61□□□□□ -2.51
CSE1YGL238W HPM1P40481 377 aa-0.61□□□□□ -2.51
CSE1YGL238W AIM11P87275 137 aa-0.61□□□□□ -2.51
CSE1YGL238W YOL131WQ08270 108 aa-0.61□□□□□ -2.51
CSE1YGL238W YCR108CQ3E819 63 aa-0.61□□□□□ -2.51
CSE1YGL238W YLR053CQ12026 108 aa-0.61□□□□□ -2.51
CSE1YGL238W YGL194C-AQ2V2P6 80 aa-0.61□□□□□ -2.51
CSE1YGL238W YEA6P39953 335 aa-0.62□□□□□ -2.51
CSE1YGL238W OLI1P61829 76 aa-0.62□□□□□ -2.51
CSE1YGL238W ARL3Q02804 198 aa-0.62□□□□□ -2.51
CSE1YGL238W PAU10Q03050 120 aa-0.62□□□□□ -2.51
CSE1YGL238W ICY1Q04329 127 aa-0.62□□□□□ -2.51
CSE1YGL238W YIL156W-BQ2V2P4 73 aa-0.62□□□□□ -2.51
CSE1YGL238W RPS28AQ3E7X9 67 aaPredicted RBP-0.62□□□□□ -2.51
CSE1YGL238W RAD6P06104 172 aa-0.62□□□□□ -2.51
CSE1YGL238W AHC2P25649 128 aa-0.62□□□□□ -2.51
CSE1YGL238W GSP1P32835 219 aaKnown RBP-0.62□□□□□ -2.51
CSE1YGL238W VMA7P39111 118 aa-0.62□□□□□ -2.51
CSE1YGL238W SWM2P40342 146 aa-0.62□□□□□ -2.51
CSE1YGL238W PAU5P43575 122 aa-0.62□□□□□ -2.51
CSE1YGL238W MIC10Q96VH5 97 aa-0.62□□□□□ -2.51
CSE1YGL238W LSM2P38203 95 aaKnown RBP-0.63□□□□□ -2.51
CSE1YGL238W POP7P38291 140 aa-0.63□□□□□ -2.51
CSE1YGL238W NVJ1P38881 321 aa-0.63□□□□□ -2.51
CSE1YGL238W YCL001W-AP87012 153 aa-0.63□□□□□ -2.51
CSE1YGL238W PAU6P0CE90 120 aa-0.63□□□□□ -2.51
CSE1YGL238W PAU18P0CE91 120 aa-0.63□□□□□ -2.51
CSE1YGL238W LSM1P47017 172 aaKnown RBP-0.63□□□□□ -2.51
CSE1YGL238W GPI19Q04082 140 aa-0.63□□□□□ -2.51
CSE1YGL238W PAU20Q08322 120 aa-0.63□□□□□ -2.51
CSE1YGL238W YLL006W-AQ3E814 58 aa-0.63□□□□□ -2.51
CSE1YGL238W RPL36AP05745 100 aaPredicted RBP-0.63□□□□□ -2.51
CSE1YGL238W RPS30AP0CX33 63 aaKnown RBP-0.63□□□□□ -2.51
CSE1YGL238W RPS30BP0CX34 63 aaKnown RBP-0.63□□□□□ -2.51
CSE1YGL238W HSP12P22943 109 aaKnown RBP-0.63□□□□□ -2.51
CSE1YGL238W MRP17P28778 131 aa-0.63□□□□□ -2.51
CSE1YGL238W NKP2Q06162 153 aa-0.63□□□□□ -2.51
CSE1YGL238W YLR361C-AQ3E795 98 aa-0.63□□□□□ -2.51
CSE1YGL238W YGR146C-AQ8TGT9 53 aa-0.63□□□□□ -2.51
CSE1YGL238W RUB1Q03919 77 aa-0.64□□□□□ -2.51
CSE1YGL238W PFY1P07274 126 aa-0.64□□□□□ -2.51
CSE1YGL238W SMX2P40204 77 aaKnown RBP-0.64□□□□□ -2.51
CSE1YGL238W JAC1P53193 184 aa-0.64□□□□□ -2.51
CSE1YGL238W MRX7P53869 86 aa-0.64□□□□□ -2.51
CSE1YGL238W SRP14P38985 146 aa-0.65□□□□□ -2.51
CSE1YGL238W TVP18Q04767 167 aa-0.65□□□□□ -2.51
CSE1YGL238W ATP17Q06405 101 aa-0.65□□□□□ -2.51
CSE1YGL238W YDL085C-AQ3E7B7 68 aaKnown RBP-0.65□□□□□ -2.51
CSE1YGL238W YOR008C-AQ3E7B9 74 aa-0.65□□□□□ -2.51
CSE1YGL238W RPS28BP0C0X0 67 aaKnown RBP-0.65□□□□□ -2.51
CSE1YGL238W PAU4P53427 120 aa-0.65□□□□□ -2.51
CSE1YGL238W HHO1P53551 258 aa-0.65□□□□□ -2.51
CSE1YGL238W ATP19P81451 68 aa-0.65□□□□□ -2.51
CSE1YGL238W NSL1Q12143 216 aa-0.65□□□□□ -2.51
CSE1YGL238W YDR182W-AQ3E796 67 aa-0.65□□□□□ -2.51
CSE1YGL238W YIL134C-AQ45U18 67 aa-0.65□□□□□ -2.51
CSE1YGL238W YDR381C-AQ3E6R5 114 aa-0.66□□□□□ -2.51
CSE1YGL238W TDA2P40045 126 aa-0.67□□□□□ -2.52
CSE1YGL238W GTT1P40582 234 aa-0.67□□□□□ -2.52
CSE1YGL238W YDL022C-AP0C5L6 82 aa-0.67□□□□□ -2.52
CSE1YGL238W YFR009W-AP0C5M9 85 aa-0.67□□□□□ -2.52
CSE1YGL238W QCR9P22289 66 aa-0.67□□□□□ -2.52
CSE1YGL238W MRPL11P36521 249 aaPredicted RBP-0.67□□□□□ -2.52
CSE1YGL238W PAU13P38725 120 aa-0.67□□□□□ -2.52
CSE1YGL238W VMA10P48836 114 aaKnown RBP-0.67□□□□□ -2.52
CSE1YGL238W FCF2Q12035 217 aaPredicted RBP-0.67□□□□□ -2.52
CSE1YGL238W YBR032WP38223 100 aa-0.67□□□□□ -2.52
CSE1YGL238W NHP6AP11632 93 aaKnown RBP-0.68□□□□□ -2.52
CSE1YGL238W YKL065W-AQ2V2P2 73 aa-0.68□□□□□ -2.52
CSE1YGL238W YBR072C-AQ3E794 53 aa-0.68□□□□□ -2.52
CSE1YGL238W CMC2Q3E7A4 109 aa-0.68□□□□□ -2.52
CSE1YGL238W YOR105WQ08504 108 aa-0.69□□□□□ -2.52
CSE1YGL238W YOR304C-AO14468 76 aa-0.69□□□□□ -2.52
CSE1YGL238W YCR050CP25630 102 aa-0.69□□□□□ -2.52
CSE1YGL238W PAU7P39545 55 aa-0.7□□□□□ -2.52
CSE1YGL238W GIM3P53900 129 aa-0.7□□□□□ -2.52
CSE1YGL238W YHR213W-AQ8TGT4 77 aa-0.7□□□□□ -2.52
CSE1YGL238W EGD2P38879 174 aaKnown RBP-0.7□□□□□ -2.52
CSE1YGL238W CYB5P40312 120 aa-0.7□□□□□ -2.52
CSE1YGL238W MRPS17Q03246 237 aaPredicted RBP-0.7□□□□□ -2.52
CSE1YGL238W UBI4P0CG63 381 aaKnown RBP-0.71□□□□□ -2.52
CSE1YGL238W YMR090WQ04304 227 aaKnown RBP-0.71□□□□□ -2.52
CSE1YGL238W YLR050CQ12155 161 aaKnown RBP-0.71□□□□□ -2.52
CSE1YGL238W SPC24Q04477 213 aa-0.71□□□□□ -2.52
CSE1YGL238W GIM5Q04493 163 aa-0.71□□□□□ -2.52
CSE1YGL238W CMD1P06787 147 aaKnown RBP-0.72□□□□□ -2.52
CSE1YGL238W ATP5P09457 212 aa-0.72□□□□□ -2.52
CSE1YGL238W PHS1P40857 217 aa-0.72□□□□□ -2.52
CSE1YGL238W YKL044WP36092 106 aa-0.72□□□□□ -2.53
CSE1YGL238W COX19Q3E731 98 aa-0.72□□□□□ -2.53
CSE1YGL238W YJR107C-AP0CT86 78 aa-0.73□□□□□ -2.53
CSE1YGL238W HMRA1P0CY11 126 aa-0.73□□□□□ -2.53
CSE1YGL238W RPB11P38902 120 aa-0.73□□□□□ -2.53
CSE1YGL238W YNL198CP40166 100 aa-0.73□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms