RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeastyeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LRS4YDR439W YHR213W-AQ8TGT4 77 aa0.63□□□□□ -2.31
LRS4YDR439W ESP1Q03018 1630 aa0.62□□□□□ -2.31
LRS4YDR439W SEN1Q00416 2231 aaKnown RBP0.61□□□□□ -2.31
LRS4YDR439W EDC1P53080 175 aaPredicted RBP0.6□□□□□ -2.31
LRS4YDR439W TY1B-JR1P47098 1755 aa0.59□□□□□ -2.32
LRS4YDR439W TY1B-ML2Q03434 1755 aaKnown RBP0.59□□□□□ -2.32
LRS4YDR439W TY1B-ER1Q03612 1755 aa0.59□□□□□ -2.32
LRS4YDR439W TY1B-OLQ12273 1755 aa0.59□□□□□ -2.32
LRS4YDR439W ATP17Q06405 101 aa0.58□□□□□ -2.32
LRS4YDR439W YCR108CQ3E819 63 aa0.57□□□□□ -2.32
LRS4YDR439W PMD1P32634 1753 aa0.55□□□□□ -2.32
LRS4YDR439W YBL044WP38194 122 aa0.55□□□□□ -2.32
LRS4YDR439W YLR146W-AQ2V2P1 62 aa0.55□□□□□ -2.32
LRS4YDR439W TY1B-NL2Q99337 1749 aaKnown RBP0.55□□□□□ -2.32
LRS4YDR439W TY2B-LR1P0C2J3 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-FP0CX63 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-GR2P0CX64 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-DR2Q03494 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-OR1Q12113 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-BQ12491 1770 aa0.55□□□□□ -2.32
LRS4YDR439W TY2B-OR2Q12501 1770 aa0.55□□□□□ -2.32
LRS4YDR439W NUP159P40477 1460 aa0.54□□□□□ -2.32
LRS4YDR439W PAU7P39545 55 aa0.53□□□□□ -2.32
LRS4YDR439W TY2B-DR3Q07791 1770 aaKnown RBP0.52□□□□□ -2.33
LRS4YDR439W UFD4P33202 1483 aa0.51□□□□□ -2.33
LRS4YDR439W ERI1P62651 68 aaKnown RBP0.51□□□□□ -2.33
LRS4YDR439W PAI3P01094 68 aa0.5□□□□□ -2.33
LRS4YDR439W SMC4Q12267 1418 aa0.49□□□□□ -2.33
LRS4YDR439W YGR025WP53216 100 aa0.49□□□□□ -2.33
LRS4YDR439W SSS1P35179 80 aa0.48□□□□□ -2.33
LRS4YDR439W RPS27AP35997 82 aaKnown RBP0.48□□□□□ -2.33
LRS4YDR439W YBR200W-AQ3E755 54 aa0.48□□□□□ -2.33
LRS4YDR439W DOP1Q03921 1698 aa0.48□□□□□ -2.33
LRS4YDR439W YFL041W-AQ3E817 63 aa0.46□□□□□ -2.34
LRS4YDR439W APC1P53886 1748 aa0.45□□□□□ -2.34
LRS4YDR439W YBL039W-BP0C268 59 aa0.45□□□□□ -2.34
LRS4YDR439W SPI1P40092 148 aa0.43□□□□□ -2.34
LRS4YDR439W YDR246W-AQ3E763 66 aa0.43□□□□□ -2.34
LRS4YDR439W MMS1Q06211 1407 aa0.43□□□□□ -2.34
LRS4YDR439W OLI1P61829 76 aa0.42□□□□□ -2.34
LRS4YDR439W YOR394C-AQ8TGJ0 55 aa0.42□□□□□ -2.34
LRS4YDR439W IRC20Q06554 1556 aa0.4□□□□□ -2.35
LRS4YDR439W YOR011W-AQ3E807 68 aa0.39□□□□□ -2.35
LRS4YDR439W SCC2Q04002 1493 aa0.39□□□□□ -2.35
LRS4YDR439W TCB3Q03640 1545 aaKnown RBP0.38□□□□□ -2.35
LRS4YDR439W SIP18P50263 79 aa0.37□□□□□ -2.35
LRS4YDR439W DNF2Q12675 1612 aa0.37□□□□□ -2.35
LRS4YDR439W RPS30AP0CX33 63 aaKnown RBP0.36□□□□□ -2.35
LRS4YDR439W RPS30BP0CX34 63 aaKnown RBP0.36□□□□□ -2.35
LRS4YDR439W ARO1P08566 1588 aaKnown RBP0.36□□□□□ -2.35
LRS4YDR439W KOG1P38873 1557 aa0.36□□□□□ -2.35
LRS4YDR439W UTP20P35194 2493 aaKnown RBP0.36□□□□□ -2.35
LRS4YDR439W HUB1Q6Q546 73 aa0.35□□□□□ -2.35
LRS4YDR439W YSY6P38374 65 aa0.34□□□□□ -2.36
LRS4YDR439W IQG1Q12280 1495 aa0.33□□□□□ -2.36
LRS4YDR439W DNF1P32660 1571 aa0.32□□□□□ -2.36
LRS4YDR439W IML1P47170 1584 aa0.32□□□□□ -2.36
LRS4YDR439W TY3B-GQ99315 1547 aa0.32□□□□□ -2.36
LRS4YDR439W YBR056W-AI2HB52 66 aa0.31□□□□□ -2.36
LRS4YDR439W YOL131WQ08270 108 aa0.31□□□□□ -2.36
LRS4YDR439W YDR182W-AQ3E796 67 aa0.3□□□□□ -2.36
LRS4YDR439W HAP1P0CE41 1502 aa0.29□□□□□ -2.36
LRS4YDR439W YIL102C-AQ2V2P5 75 aa0.28□□□□□ -2.36
LRS4YDR439W VPS15P22219 1454 aa0.28□□□□□ -2.37
LRS4YDR439W FKS3Q04952 1785 aa0.26□□□□□ -2.37
LRS4YDR439W YOR008C-AQ3E7B9 74 aa0.25□□□□□ -2.37
LRS4YDR439W YMR001C-AQ8TGS9 76 aa0.25□□□□□ -2.37
LRS4YDR439W VTH1P40438 1549 aa0.24□□□□□ -2.37
LRS4YDR439W VTH2P40890 1549 aa0.24□□□□□ -2.37
LRS4YDR439W MYO4P32492 1471 aa0.23□□□□□ -2.37
LRS4YDR439W RPS27BP38711 82 aa0.22□□□□□ -2.37
LRS4YDR439W TOS6P48560 102 aa0.22□□□□□ -2.37
LRS4YDR439W RPO31P04051 1460 aa0.22□□□□□ -2.37
LRS4YDR439W YLR157W-DP0CE99 70 aa0.2□□□□□ -2.38
LRS4YDR439W YOL166W-AQ8TGJ1 51 aa0.2□□□□□ -2.38
LRS4YDR439W RPO21P04050 1733 aaKnown RBP0.2□□□□□ -2.38
LRS4YDR439W YFR010W-AP0C5N0 62 aa0.18□□□□□ -2.38
LRS4YDR439W RRP5Q05022 1729 aaKnown RBP0.18□□□□□ -2.38
LRS4YDR439W RPS29AP41057 56 aaKnown RBP0.15□□□□□ -2.39
LRS4YDR439W PDR15Q04182 1529 aaKnown RBP0.14□□□□□ -2.39
LRS4YDR439W TOR1P35169 2470 aa0.13□□□□□ -2.39
LRS4YDR439W SPO14P36126 1683 aa0.13□□□□□ -2.39
LRS4YDR439W VMA9Q3E7B6 73 aa0.1□□□□□ -2.39
LRS4YDR439W YBR230W-AQ3E762 66 aa0.09□□□□□ -2.4
LRS4YDR439W VMR1P38735 1592 aa0.09□□□□□ -2.4
LRS4YDR439W YOR192C-CQ3E736 78 aa0.08□□□□□ -2.4
LRS4YDR439W YGR146C-AQ8TGT9 53 aa0.08□□□□□ -2.4
LRS4YDR439W BCK1Q01389 1478 aa0.06□□□□□ -2.4
LRS4YDR439W YLL006W-AQ3E814 58 aa0.06□□□□□ -2.4
LRS4YDR439W PDR12Q02785 1511 aa0.03□□□□□ -2.41
LRS4YDR439W YGL258W-AQ3E740 77 aa-0.06□□□□□ -2.42
LRS4YDR439W YDR524C-BQ3E6R4 66 aa-0.1□□□□□ -2.43
LRS4YDR439W YKL023C-AQ2V2P3 75 aa-0.11□□□□□ -2.43
LRS4YDR439W COA2Q3E823 68 aa-0.12□□□□□ -2.43
LRS4YDR439W YBT1P32386 1661 aa-0.12□□□□□ -2.43
LRS4YDR439W CDC25P04821 1589 aa-0.13□□□□□ -2.43
LRS4YDR439W TY1B-DR4Q07793 1604 aa-0.13□□□□□ -2.43
LRS4YDR439W SNQ2P32568 1501 aaKnown RBP-0.13□□□□□ -2.43
LRS4YDR439W PDR5P33302 1511 aaKnown RBP-0.14□□□□□ -2.43
LRS4YDR439W YPR010C-AA5Z2X5 72 aa-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms