RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W PRP8P33334 2413 aaKnown RBP1.05□□□□□ -2.24
HKR1YDR420W AGA2P32781 87 aa1.05□□□□□ -2.24
HKR1YDR420W YFL051CP43552 160 aa1.05□□□□□ -2.24
HKR1YDR420W LCL1Q02786 101 aa1.05□□□□□ -2.24
HKR1YDR420W YLR307C-AQ3E825 87 aa1.05□□□□□ -2.24
HKR1YDR420W STT4P37297 1900 aa1.05□□□□□ -2.24
HKR1YDR420W PET8P38921 284 aa1.05□□□□□ -2.24
HKR1YDR420W YJL009WP47078 108 aa1.05□□□□□ -2.24
HKR1YDR420W SRL1Q08673 210 aa1.05□□□□□ -2.24
HKR1YDR420W YLR342W-AQ3E810 57 aa1.05□□□□□ -2.24
HKR1YDR420W SED1Q01589 338 aa1.04□□□□□ -2.24
HKR1YDR420W MIG3P39943 394 aa1.04□□□□□ -2.24
HKR1YDR420W RPL42AP0CX27 106 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W RPL42BP0CX28 106 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W BRR2P32639 2163 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W ATP15P21306 62 aa1.04□□□□□ -2.24
HKR1YDR420W ERI1P62651 68 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W SDH6Q3E785 79 aa1.04□□□□□ -2.24
HKR1YDR420W YJL027CP47063 138 aaPredicted RBP1.03□□□□□ -2.24
HKR1YDR420W EDC1P53080 175 aaPredicted RBP1.03□□□□□ -2.24
HKR1YDR420W MRP10O75012 95 aa1.03□□□□□ -2.24
HKR1YDR420W YJR107C-AP0CT86 78 aa1.03□□□□□ -2.24
HKR1YDR420W YHR050W-AQ05451 56 aa1.03□□□□□ -2.24
HKR1YDR420W YBR027CP38220 110 aa1.03□□□□□ -2.24
HKR1YDR420W YEL067CP39978 195 aa1.03□□□□□ -2.24
HKR1YDR420W YGR025WP53216 100 aa1.03□□□□□ -2.24
HKR1YDR420W UBR1P19812 1950 aa1.03□□□□□ -2.24
HKR1YDR420W COX23P38824 151 aa1.03□□□□□ -2.25
HKR1YDR420W YBR230W-AQ3E762 66 aa1.03□□□□□ -2.25
HKR1YDR420W CYR1P08678 2026 aaKnown RBP1.03□□□□□ -2.25
HKR1YDR420W YLR157W-DP0CE99 70 aa1.02□□□□□ -2.25
HKR1YDR420W ATP18P81450 59 aa1.02□□□□□ -2.25
HKR1YDR420W RTC6O14464 93 aa1.02□□□□□ -2.25
HKR1YDR420W CDC39P25655 2108 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W SGF11Q03067 99 aa1.02□□□□□ -2.25
HKR1YDR420W YMR122CQ03879 124 aa1.02□□□□□ -2.25
HKR1YDR420W DSE2P38844 325 aa1.02□□□□□ -2.25
HKR1YDR420W GCN1P33892 2672 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W AQY2P0CD90 149 aa1.02□□□□□ -2.25
HKR1YDR420W RPS27AP35997 82 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W YBR219CP38317 127 aa1.02□□□□□ -2.25
HKR1YDR420W RPS27BP38711 82 aa1.02□□□□□ -2.25
HKR1YDR420W YIL163CP40448 117 aa1.02□□□□□ -2.25
HKR1YDR420W OLI1P61829 76 aa1.02□□□□□ -2.25
HKR1YDR420W YDR246W-AQ3E763 66 aa1.02□□□□□ -2.25
HKR1YDR420W YOR011W-AQ3E807 68 aa1.02□□□□□ -2.25
HKR1YDR420W YCR022CP25620 114 aa1.02□□□□□ -2.25
HKR1YDR420W YLR236CA0A023PZG4 107 aa1.01□□□□□ -2.25
HKR1YDR420W YBL081WP38180 368 aaKnown RBP1.01□□□□□ -2.25
HKR1YDR420W YEL014CP39999 101 aa1.01□□□□□ -2.25
HKR1YDR420W YPR053CQ6Q5F3 151 aa1.01□□□□□ -2.25
HKR1YDR420W YSF3P0C074 85 aaPredicted RBP1.01□□□□□ -2.25
HKR1YDR420W YLR285C-AQ3E771 56 aa1.01□□□□□ -2.25
HKR1YDR420W YOR008C-AQ3E7B9 74 aa1.01□□□□□ -2.25
HKR1YDR420W YOR032W-AQ8TGS1 66 aa1.01□□□□□ -2.25
HKR1YDR420W HFA1P32874 2273 aa1.01□□□□□ -2.25
HKR1YDR420W YER145C-AA0A023PYF4 145 aa1.01□□□□□ -2.25
HKR1YDR420W YKL018C-AQ3E7A7 99 aa1.01□□□□□ -2.25
HKR1YDR420W YPR108W-AQ3E7B3 70 aa1.01□□□□□ -2.25
HKR1YDR420W CCW12Q12127 133 aa1.01□□□□□ -2.25
HKR1YDR420W COX8P04039 78 aa1□□□□□ -2.25
HKR1YDR420W KRE9P39005 276 aa1□□□□□ -2.25
HKR1YDR420W YIR020CP40575 100 aa1□□□□□ -2.25
HKR1YDR420W YNL122CP53921 115 aaPredicted RBP1□□□□□ -2.25
HKR1YDR420W RPS11AP0CX47 156 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W RPS11BP0CX48 156 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W YOL166W-AQ8TGJ1 51 aa1□□□□□ -2.25
HKR1YDR420W UTP20P35194 2493 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W RPL29P05747 59 aaPredicted RBP1□□□□□ -2.25
HKR1YDR420W YIL086CP40503 102 aa1□□□□□ -2.25
HKR1YDR420W YBL071CP38185 102 aa0.99□□□□□ -2.25
HKR1YDR420W RPL33AP05744 107 aaKnown RBP0.99□□□□□ -2.25
HKR1YDR420W YOR376W-AQ3E805 51 aa0.99□□□□□ -2.25
HKR1YDR420W RPR2P40571 144 aa0.99□□□□□ -2.25
HKR1YDR420W ECM19Q06011 112 aa0.99□□□□□ -2.25
HKR1YDR420W RPS30AP0CX33 63 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W RPS30BP0CX34 63 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W YNR077CP53758 84 aa0.98□□□□□ -2.25
HKR1YDR420W GIS2P53849 153 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
HKR1YDR420W HOR7Q05827 59 aa0.98□□□□□ -2.25
HKR1YDR420W LCL2Q08045 131 aa0.98□□□□□ -2.25
HKR1YDR420W YMR001C-AQ8TGS9 76 aa0.98□□□□□ -2.25
HKR1YDR420W GLT1Q12680 2145 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W SLH1P53327 1967 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W YHR032W-AP0C5N6 59 aa0.98□□□□□ -2.25
HKR1YDR420W YEL008WP40001 126 aa0.98□□□□□ -2.25
HKR1YDR420W YJL144WP47009 104 aa0.98□□□□□ -2.25
HKR1YDR420W YDR010CQ12426 110 aa0.98□□□□□ -2.25
HKR1YDR420W DAD4P69851 72 aa0.98□□□□□ -2.25
HKR1YDR420W YGL014C-AP0C5N1 53 aa0.98□□□□□ -2.25
HKR1YDR420W BLM10P43583 2143 aa0.98□□□□□ -2.25
HKR1YDR420W NOP10Q6Q547 58 aaPredicted RBP0.98□□□□□ -2.25
HKR1YDR420W MRPS12P53732 153 aa0.97□□□□□ -2.25
HKR1YDR420W YNL190WP53872 204 aa0.97□□□□□ -2.25
HKR1YDR420W DDR2P89113 61 aa0.97□□□□□ -2.25
HKR1YDR420W YNL042W-BQ3E7Z2 85 aa0.97□□□□□ -2.25
HKR1YDR420W RRT15Q3E811 62 aa0.97□□□□□ -2.25
HKR1YDR420W YMR122W-AQ3E842 84 aa0.97□□□□□ -2.25
HKR1YDR420W FAS1P07149 2051 aaKnown RBP0.97□□□□□ -2.25
HKR1YDR420W SEC16P48415 2195 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms