RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 TNRC18O15417 2968 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 GOLGA6L9A6NEM1 432 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 HSF2BPO75031 334 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 BEST1O76090 585 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 CFHP08603 1231 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 TMEM253P0C7T8 217 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 KRT3P12035 628 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 MYL4P12829 197 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
PHGDH-220ENST00000641570 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
PHGDH-220ENST00000641570 HYAL1Q12794 435 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-220ENST00000641570 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 LILRA6Q6PI73 481 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 FAM183BPQ6ZVS7 135 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 SLC22A17Q8WUG5 538 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 MYLIPQ8WY64 445 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 OVCA2Q8WZ82 227 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
PHGDH-220ENST00000641570 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-220ENST00000641570 DESI2Q9BSY9 194 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 PRKD2Q9BZL6 878 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
PHGDH-220ENST00000641570 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 TULP2O00295 520 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ERBB2P04626 1255 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 GLI1P08151 1106 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ATF6P18850 670 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 VAV2P52735 878 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 GALCP54803 685 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 YWHAGP61981 247 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 MRPS5P82675 430 aaKnown RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 CCZ1BP86790 482 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 SLC6A3Q01959 620 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ITIH3Q06033 890 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 MTF1Q14872 753 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 SND1Q7KZF4 910 aaKnown RBP eCLIP13.59□□□□□ -0.232e-7■■■□□ 15.9
PHGDH-220ENST00000641570 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 DNAJB7Q7Z6W7 309 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 PHLDB2Q86SQ0 1253 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 MON1AQ86VX9 555 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 C3orf20Q8ND61 904 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ALS2CR12Q96Q35 445 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 TRPC7Q9HCX4 862 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 METTL5Q9NRN9 209 aaKnown RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 OLA1Q9NTK5 396 aaKnown RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 UVRAGQ9P2Y5 699 aa13.59□□□□□ -0.23
PHGDH-220ENST00000641570 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-220ENST00000641570 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 RFPL2O75678 378 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 LTFP02788 710 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 POU2F2P09086 479 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 RRM1P23921 792 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 GABRR2P28476 465 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 SDC4P31431 198 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 GBP1P32455 592 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 SCNN1AP37088 669 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 GABRB2P47870 512 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 TAF10Q12962 218 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 CCDC85BQ15834 202 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ODF2Q5BJF6 829 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 RAB41Q5JT25 222 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 Q7L0L9 218 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 XYLT1Q86Y38 959 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 RNF34Q969K3 372 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 CDX2Q99626 313 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-220ENST00000641570 SYT11Q9BT88 431 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 APOL5Q9BWW9 433 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
PHGDH-220ENST00000641570 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms