RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 TULP3O75386 442 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 REC8O95072 547 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 CTDNEP1O95476 244 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 PFKLP17858 780 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 ANXA13P27216 316 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 GRK6P43250 576 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 ACOT2P49753 483 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 CLDN6P56747 220 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 SLC7A9P82251 487 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 CCDC173Q0VFZ6 552 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 IFRD2Q12894 506 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-217ENST00000641455 MYO1EQ12965 1108 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 CCDC142Q17RM4 750 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 DCAF12L1Q5VU92 463 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 KRT79Q5XKE5 535 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 GRAMD4Q6IC98 578 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 C1orf186Q6ZWK4 172 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 TMPRSS12Q86WS5 348 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
PHGDH-217ENST00000641455 MIB1Q86YT6 1006 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 PHTF2Q8N3S3 785 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 PDCL2Q8N4E4 241 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 TERB1Q8NA31 727 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 ACOX2Q99424 681 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
PHGDH-217ENST00000641455 TIPINQ9BVW5 301 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 RAB34Q9BZG1 259 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 CCSER1Q9C0I3 900 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 TBC1D14Q9P2M4 693 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 FTSJ1Q9UET6 329 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 EIF2B4Q9UI10 523 aaKnown RBP8.39□□□□□ -1.07
PHGDH-217ENST00000641455 SH3BP1Q9Y3L3 701 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 PCDHGB2Q9Y5G2 931 aa8.39□□□□□ -1.07
PHGDH-217ENST00000641455 KNL1Q8NG31 2342 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 K7ENM7 598 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 TRIM24O15164 1050 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 FAM189A1O60320 539 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 WISP1O95388 367 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 ADRB2P07550 413 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 FDPSP14324 419 aaKnown RBP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 GRIK1P39086 918 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 PNPLA4P41247 253 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 FXR2P51116 673 aaKnown RBP eCLIP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 BNC1Q01954 994 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 SF3A1Q15459 793 aaKnown RBP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 INAVAQ3KP66 663 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 TTC38Q5R3I4 469 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 C4orf50Q6ZRC1 276 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 DENND5BQ6ZUT9 1274 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 DNASE2BQ8WZ79 361 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 FUBP3Q96I24 572 aaKnown RBP eCLIP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 MRGPRX1Q96LB2 322 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 RNF38Q9H0F5 515 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 ASB7Q9H672 318 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 DNAJC17Q9NVM6 304 aaKnown RBP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 GMIPQ9P107 970 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
PHGDH-217ENST00000641455 L1RE1Q9UN81 338 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 C2CD2Q9Y426 696 aa8.38□□□□□ -1.07
PHGDH-217ENST00000641455 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 A0A0B4J269 797 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 E2F8A0AVK6 867 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 ZNF840PA6NDX5 716 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 PP2D1A8MPX8 630 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 HOXC11O43248 304 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 HCRTO43612 131 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 IRF1P10914 325 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 PCSK1P29120 753 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CDC25AP30304 524 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 IL12RB1P42701 662 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 MAGEA11P43364 429 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CSNK1EP49674 416 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CCT8P50990 548 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 USP46P62068 366 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 PSMC1P62191 440 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 IL9RQ01113 521 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 ORC2Q13416 577 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 GNL2Q13823 731 aaKnown RBP8.37□□□□□ -1.07
PHGDH-217ENST00000641455 STARD3Q14849 445 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 TEAD4Q15561 434 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 PTPRNQ16849 979 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 KIF19Q2TAC6 998 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CFAP221Q4G0U5 840 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 ADALQ6DHV7 355 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 PCSK4Q6UW60 755 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 KCNK18Q7Z418 384 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 OSTM1Q86WC4 334 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 CACUL1Q86Y37 369 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 FMNL3Q8IVF7 1028 aa8.37□□□□□ -1.07
PHGDH-217ENST00000641455 ETFBKMTQ8IXQ9 262 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms